Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.26■■□□□ 1.95
TRBV23OR9-2A0A075B6M9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
TRBV23OR9-2A0A075B6M9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.24■■□□□ 1.95
TRBV23OR9-2A0A075B6M9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.24■■□□□ 1.95
TRBV23OR9-2A0A075B6M9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.24■■□□□ 1.95
TRBV23OR9-2A0A075B6M9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRBV23OR9-2A0A075B6M9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.21■■□□□ 1.95
TRBV23OR9-2A0A075B6M9 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TRBV23OR9-2A0A075B6M9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRBV23OR9-2A0A075B6M9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRBV23OR9-2A0A075B6M9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.18■■□□□ 1.94
TRBV23OR9-2A0A075B6M9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
TRBV23OR9-2A0A075B6M9 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TRBV23OR9-2A0A075B6M9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TRBV23OR9-2A0A075B6M9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.12■■□□□ 1.93
TRBV23OR9-2A0A075B6M9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.12■■□□□ 1.93
TRBV23OR9-2A0A075B6M9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TRBV23OR9-2A0A075B6M9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TRBV23OR9-2A0A075B6M9 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
TRBV23OR9-2A0A075B6M9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.1■■□□□ 1.93
TRBV23OR9-2A0A075B6M9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TRBV23OR9-2A0A075B6M9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.09■■□□□ 1.93
TRBV23OR9-2A0A075B6M9 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRBV23OR9-2A0A075B6M9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRBV23OR9-2A0A075B6M9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TRBV23OR9-2A0A075B6M9 AL133380.1-201ENST00000506013 324 ntBASIC27.07■■□□□ 1.92
TRBV23OR9-2A0A075B6M9 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.07■■□□□ 1.92
TRBV23OR9-2A0A075B6M9 SUZ12P1-203ENST00000578195 985 ntBASIC27.06■■□□□ 1.92
TRBV23OR9-2A0A075B6M9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRBV23OR9-2A0A075B6M9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.04■■□□□ 1.92
TRBV23OR9-2A0A075B6M9 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.03■■□□□ 1.92
TRBV23OR9-2A0A075B6M9 CAHM-201ENST00000604200 896 ntBASIC27.03■■□□□ 1.92
TRBV23OR9-2A0A075B6M9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
TRBV23OR9-2A0A075B6M9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
TRBV23OR9-2A0A075B6M9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TRBV23OR9-2A0A075B6M9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TRBV23OR9-2A0A075B6M9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TRBV23OR9-2A0A075B6M9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.99■■□□□ 1.91
TRBV23OR9-2A0A075B6M9 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
TRBV23OR9-2A0A075B6M9 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TRBV23OR9-2A0A075B6M9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TRBV23OR9-2A0A075B6M9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TRBV23OR9-2A0A075B6M9 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TRBV23OR9-2A0A075B6M9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TRBV23OR9-2A0A075B6M9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.94■■□□□ 1.9
TRBV23OR9-2A0A075B6M9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.94■■□□□ 1.9
TRBV23OR9-2A0A075B6M9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
TRBV23OR9-2A0A075B6M9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.92■■□□□ 1.9
TRBV23OR9-2A0A075B6M9 AL391121.1-201ENST00000607967 1349 ntBASIC26.91■■□□□ 1.9
TRBV23OR9-2A0A075B6M9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
TRBV23OR9-2A0A075B6M9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
TRBV23OR9-2A0A075B6M9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TRBV23OR9-2A0A075B6M9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TRBV23OR9-2A0A075B6M9 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
TRBV23OR9-2A0A075B6M9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
TRBV23OR9-2A0A075B6M9 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
TRBV23OR9-2A0A075B6M9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TRBV23OR9-2A0A075B6M9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.87■■□□□ 1.89
TRBV23OR9-2A0A075B6M9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TRBV23OR9-2A0A075B6M9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TRBV23OR9-2A0A075B6M9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TRBV23OR9-2A0A075B6M9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TRBV23OR9-2A0A075B6M9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TRBV23OR9-2A0A075B6M9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TRBV23OR9-2A0A075B6M9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
TRBV23OR9-2A0A075B6M9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TRBV23OR9-2A0A075B6M9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.79■■□□□ 1.88
TRBV23OR9-2A0A075B6M9 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TRBV23OR9-2A0A075B6M9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.76■■□□□ 1.87
TRBV23OR9-2A0A075B6M9 RPS2P35-201ENST00000443417 897 ntBASIC26.76■■□□□ 1.87
TRBV23OR9-2A0A075B6M9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRBV23OR9-2A0A075B6M9 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRBV23OR9-2A0A075B6M9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TRBV23OR9-2A0A075B6M9 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TRBV23OR9-2A0A075B6M9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TRBV23OR9-2A0A075B6M9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TRBV23OR9-2A0A075B6M9 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.72■■□□□ 1.87
TRBV23OR9-2A0A075B6M9 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.71■■□□□ 1.87
TRBV23OR9-2A0A075B6M9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.71■■□□□ 1.87
TRBV23OR9-2A0A075B6M9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
TRBV23OR9-2A0A075B6M9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TRBV23OR9-2A0A075B6M9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TRBV23OR9-2A0A075B6M9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.67■■□□□ 1.86
TRBV23OR9-2A0A075B6M9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
TRBV23OR9-2A0A075B6M9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.66■■□□□ 1.86
TRBV23OR9-2A0A075B6M9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRBV23OR9-2A0A075B6M9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
TRBV23OR9-2A0A075B6M9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRBV23OR9-2A0A075B6M9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TRBV23OR9-2A0A075B6M9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TRBV23OR9-2A0A075B6M9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.64■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.64■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.63■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 WASH5P-204ENST00000632292 975 ntBASIC26.63■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.63■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms