Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.62■■■□□ 2.97
TRBV23OR9-2A0A075B6M9 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
TRBV23OR9-2A0A075B6M9 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.55■■■□□ 2.8
TRBV23OR9-2A0A075B6M9 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.55■■■□□ 2.8
TRBV23OR9-2A0A075B6M9 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
TRBV23OR9-2A0A075B6M9 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
TRBV23OR9-2A0A075B6M9 AL356512.1-201ENST00000607453 1739 ntBASIC32.46■■■□□ 2.79
TRBV23OR9-2A0A075B6M9 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.04■■■□□ 2.72
TRBV23OR9-2A0A075B6M9 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.62■■■□□ 2.65
TRBV23OR9-2A0A075B6M9 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.6■■■□□ 2.65
TRBV23OR9-2A0A075B6M9 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.42■■■□□ 2.62
TRBV23OR9-2A0A075B6M9 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
TRBV23OR9-2A0A075B6M9 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
TRBV23OR9-2A0A075B6M9 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.29■■■□□ 2.6
TRBV23OR9-2A0A075B6M9 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.21■■■□□ 2.59
TRBV23OR9-2A0A075B6M9 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.18■■■□□ 2.58
TRBV23OR9-2A0A075B6M9 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.14■■■□□ 2.58
TRBV23OR9-2A0A075B6M9 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRBV23OR9-2A0A075B6M9 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TRBV23OR9-2A0A075B6M9 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.84■■■□□ 2.53
TRBV23OR9-2A0A075B6M9 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
TRBV23OR9-2A0A075B6M9 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
TRBV23OR9-2A0A075B6M9 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRBV23OR9-2A0A075B6M9 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TRBV23OR9-2A0A075B6M9 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
TRBV23OR9-2A0A075B6M9 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
TRBV23OR9-2A0A075B6M9 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TRBV23OR9-2A0A075B6M9 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TRBV23OR9-2A0A075B6M9 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.28■■■□□ 2.44
TRBV23OR9-2A0A075B6M9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.21■■■□□ 2.43
TRBV23OR9-2A0A075B6M9 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
TRBV23OR9-2A0A075B6M9 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
TRBV23OR9-2A0A075B6M9 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
TRBV23OR9-2A0A075B6M9 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.02■■■□□ 2.4
TRBV23OR9-2A0A075B6M9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
TRBV23OR9-2A0A075B6M9 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
TRBV23OR9-2A0A075B6M9 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
TRBV23OR9-2A0A075B6M9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
TRBV23OR9-2A0A075B6M9 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.76■■■□□ 2.35
TRBV23OR9-2A0A075B6M9 AC015813.7-201ENST00000623294 581 ntBASIC29.75■■■□□ 2.35
TRBV23OR9-2A0A075B6M9 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.72■■■□□ 2.35
TRBV23OR9-2A0A075B6M9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TRBV23OR9-2A0A075B6M9 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
TRBV23OR9-2A0A075B6M9 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
TRBV23OR9-2A0A075B6M9 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.62■■■□□ 2.33
TRBV23OR9-2A0A075B6M9 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
TRBV23OR9-2A0A075B6M9 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.57■■■□□ 2.32
TRBV23OR9-2A0A075B6M9 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.57■■■□□ 2.32
TRBV23OR9-2A0A075B6M9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
TRBV23OR9-2A0A075B6M9 AC006077.2-201ENST00000623591 457 ntBASIC29.45■■■□□ 2.31
TRBV23OR9-2A0A075B6M9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
TRBV23OR9-2A0A075B6M9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.41■■■□□ 2.3
TRBV23OR9-2A0A075B6M9 ZNRF2P1-201ENST00000441407 443 ntBASIC29.38■■■□□ 2.29
TRBV23OR9-2A0A075B6M9 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
TRBV23OR9-2A0A075B6M9 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
TRBV23OR9-2A0A075B6M9 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.35■■■□□ 2.29
TRBV23OR9-2A0A075B6M9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
TRBV23OR9-2A0A075B6M9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
TRBV23OR9-2A0A075B6M9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.23■■■□□ 2.27
TRBV23OR9-2A0A075B6M9 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
TRBV23OR9-2A0A075B6M9 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.22■■■□□ 2.27
TRBV23OR9-2A0A075B6M9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
TRBV23OR9-2A0A075B6M9 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TRBV23OR9-2A0A075B6M9 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
TRBV23OR9-2A0A075B6M9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
TRBV23OR9-2A0A075B6M9 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
TRBV23OR9-2A0A075B6M9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
TRBV23OR9-2A0A075B6M9 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
TRBV23OR9-2A0A075B6M9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
TRBV23OR9-2A0A075B6M9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
TRBV23OR9-2A0A075B6M9 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
TRBV23OR9-2A0A075B6M9 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.79■■■□□ 2.2
TRBV23OR9-2A0A075B6M9 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
TRBV23OR9-2A0A075B6M9 AP002365.1-201ENST00000603448 772 ntBASIC28.7■■■□□ 2.18
TRBV23OR9-2A0A075B6M9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.66■■■□□ 2.18
TRBV23OR9-2A0A075B6M9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TRBV23OR9-2A0A075B6M9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.61■■■□□ 2.17
TRBV23OR9-2A0A075B6M9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.61■■■□□ 2.17
TRBV23OR9-2A0A075B6M9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TRBV23OR9-2A0A075B6M9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.6■■■□□ 2.17
TRBV23OR9-2A0A075B6M9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.6■■■□□ 2.17
TRBV23OR9-2A0A075B6M9 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.59■■■□□ 2.17
TRBV23OR9-2A0A075B6M9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
TRBV23OR9-2A0A075B6M9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
TRBV23OR9-2A0A075B6M9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.57■■■□□ 2.16
TRBV23OR9-2A0A075B6M9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TRBV23OR9-2A0A075B6M9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRBV23OR9-2A0A075B6M9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TRBV23OR9-2A0A075B6M9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.53■■■□□ 2.16
TRBV23OR9-2A0A075B6M9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TRBV23OR9-2A0A075B6M9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
TRBV23OR9-2A0A075B6M9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
TRBV23OR9-2A0A075B6M9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.47■■■□□ 2.15
TRBV23OR9-2A0A075B6M9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
TRBV23OR9-2A0A075B6M9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TRBV23OR9-2A0A075B6M9 DYNLL1-208ENST00000550178 581 ntBASIC28.43■■■□□ 2.14
TRBV23OR9-2A0A075B6M9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.41■■■□□ 2.14
TRBV23OR9-2A0A075B6M9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TRBV23OR9-2A0A075B6M9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.39■■■□□ 2.13
TRBV23OR9-2A0A075B6M9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms