Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 CCDC144NL-AS1-210ENST00000577968 821 ntTSL 1 (best)4.63□□□□□ -1.672e-8■■■■□ 23
CSTF2P33240 ATF7IP2-218ENST00000570163 559 ntTSL 22.27□□□□□ -2.051e-30■■■■□ 23
CSTF2P33240 WWOX-213ENST00000566662 571 ntTSL 415.15■□□□□ 0.021e-6■■■■□ 23
CSTF2P33240 WWOX-208ENST00000562639 595 ntTSL 44.53□□□□□ -1.681e-6■■■■□ 23
CSTF2P33240 MKL2-208ENST00000573434 466 ntTSL 37.8□□□□□ -1.166e-15■■■■□ 23
CSTF2P33240 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.196e-15■■■■□ 23
CSTF2P33240 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.296e-15■■■■□ 23
CSTF2P33240 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.376e-15■■■■□ 23
CSTF2P33240 MKL2-210ENST00000574998 545 ntTSL 45.6□□□□□ -1.516e-15■■■■□ 23
CSTF2P33240 MKL2-212ENST00000575768 389 ntTSL 33.33□□□□□ -1.886e-15■■■■□ 23
CSTF2P33240 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.33■□□□□ 0.693e-7■■■■□ 22.9
CSTF2P33240 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.563e-7■■■■□ 22.9
CSTF2P33240 SDHA-206ENST00000505555 2230 ntTSL 218.29■□□□□ 0.523e-7■■■■□ 22.9
CSTF2P33240 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.76■□□□□ 0.273e-7■■■■□ 22.9
CSTF2P33240 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.6■□□□□ 0.253e-7■■■■□ 22.9
CSTF2P33240 SDHA-218ENST00000515752 1809 ntTSL 514.18□□□□□ -0.143e-7■■■■□ 22.9
CSTF2P33240 SDHA-209ENST00000509082 434 ntTSL 511.87□□□□□ -0.513e-7■■■■□ 22.9
CSTF2P33240 SDHA-219ENST00000515815 704 ntTSL 311.87□□□□□ -0.513e-7■■■■□ 22.9
CSTF2P33240 SDHA-216ENST00000514027 2209 ntTSL 211.85□□□□□ -0.513e-7■■■■□ 22.9
CSTF2P33240 SDHA-214ENST00000511810 3001 ntTSL 29.35□□□□□ -0.913e-7■■■■□ 22.9
CSTF2P33240 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.363e-6■■■■□ 22.9
CSTF2P33240 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.783e-7■■■■□ 22.9
CSTF2P33240 RPL21-205ENST00000461690 681 ntTSL 53.18□□□□□ -1.97e-7■■■■□ 22.9
CSTF2P33240 CYP27A1-204ENST00000466602 1210 ntTSL 222.51■■□□□ 1.196e-7■■■■□ 22.9
CSTF2P33240 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.666e-7■■■■□ 22.9
CSTF2P33240 CYP27A1-203ENST00000445971 903 ntTSL 517.47■□□□□ 0.396e-7■■■■□ 22.9
CSTF2P33240 CYP27A1-205ENST00000494263 2566 ntTSL 217.15■□□□□ 0.346e-7■■■■□ 22.9
CSTF2P33240 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.78□□□□□ -0.049e-7■■■■□ 22.9
CSTF2P33240 SHANK2-209ENST00000445654 522 ntTSL 314.09□□□□□ -0.159e-7■■■■□ 22.9
CSTF2P33240 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.99□□□□□ -0.179e-7■■■■□ 22.9
CSTF2P33240 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.23□□□□□ -0.299e-7■■■■□ 22.9
CSTF2P33240 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC11.97□□□□□ -0.499e-7■■■■□ 22.9
CSTF2P33240 SHANK2-205ENST00000412252 1376 ntTSL 511.57□□□□□ -0.569e-7■■■■□ 22.9
CSTF2P33240 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC11.56□□□□□ -0.569e-7■■■■□ 22.9
CSTF2P33240 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC11.37□□□□□ -0.599e-7■■■■□ 22.9
CSTF2P33240 SHANK2-208ENST00000426687 460 ntTSL 58.85□□□□□ -0.999e-7■■■■□ 22.9
CSTF2P33240 KMT5B-207ENST00000427752 2475 ntTSL 221.28■■□□□ 11e-7■■■■□ 22.9
CSTF2P33240 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.731e-7■■■■□ 22.9
CSTF2P33240 KMT5B-209ENST00000441488 2816 ntTSL 1 (best)8.44□□□□□ -1.061e-7■■■■□ 22.9
CSTF2P33240 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.531e-7■■■■□ 22.9
CSTF2P33240 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.363e-7■■■■□ 22.9
CSTF2P33240 AGAP1-209ENST00000453371 2138 ntTSL 516.79■□□□□ 0.284e-7■■■■□ 22.8
CSTF2P33240 AGAP1-210ENST00000466575 541 ntTSL 314.7□□□□□ -0.064e-7■■■■□ 22.8
CSTF2P33240 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.57■□□□□ 0.889e-8■■■■□ 22.8
CSTF2P33240 VOPP1-214ENST00000462326 536 ntTSL 418.19■□□□□ 0.59e-8■■■■□ 22.8
CSTF2P33240 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.04■□□□□ 0.489e-8■■■■□ 22.8
CSTF2P33240 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.069e-8■■■■□ 22.8
CSTF2P33240 FRAS1-204ENST00000508909 2297 ntTSL 215.22■□□□□ 0.039e-8■■■■□ 22.8
CSTF2P33240 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.7□□□□□ -1.59e-8■■■■□ 22.8
CSTF2P33240 FXN-204ENST00000484259 359 ntTSL 33.77□□□□□ -1.819e-8■■■■□ 22.8
CSTF2P33240 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.444e-6■■■■□ 22.8
CSTF2P33240 AGBL3-204ENST00000455283 497 ntTSL 217.71■□□□□ 0.434e-8■■■■□ 22.8
CSTF2P33240 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.62■□□□□ 0.414e-6■■■■□ 22.8
CSTF2P33240 AGBL3-207ENST00000494702 856 ntTSL 316.32■□□□□ 0.24e-8■■■■□ 22.8
CSTF2P33240 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.26□□□□□ -0.134e-8■■■■□ 22.8
CSTF2P33240 AGBL3-206ENST00000476700 2979 ntTSL 211.16□□□□□ -0.624e-8■■■■□ 22.8
CSTF2P33240 AGBL3-201ENST00000275763 2973 ntTSL 1 (best)10.11□□□□□ -0.794e-8■■■■□ 22.8
CSTF2P33240 C1QTNF3-AMACR-201ENST00000382079 3424 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.913e-6■■■■□ 22.8
CSTF2P33240 AGBL3-203ENST00000436302 3533 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.984e-8■■■■□ 22.8
CSTF2P33240 MALRD1-201ENST00000377265 1761 ntTSL 26.62□□□□□ -1.354e-8■■■■□ 22.8
CSTF2P33240 MALRD1-205ENST00000480707 414 ntTSL 33.57□□□□□ -1.844e-8■■■■□ 22.8
CSTF2P33240 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.421e-6■■■■□ 22.8
CSTF2P33240 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.671e-6■■■■□ 22.8
CSTF2P33240 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.63■□□□□ 0.251e-22■■■■□ 22.8
CSTF2P33240 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.181e-22■■■■□ 22.8
CSTF2P33240 KDELR2-205ENST00000463747 376 ntTSL 510.6□□□□□ -0.711e-22■■■■□ 22.8
CSTF2P33240 KDELR2-202ENST00000382267 583 ntTSL 49.57□□□□□ -0.881e-22■■■■□ 22.8
CSTF2P33240 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.19□□□□□ -1.421e-22■■■■□ 22.8
CSTF2P33240 TCF12-222ENST00000561152 675 ntTSL 525.11■■□□□ 1.614e-7■■■■□ 22.7
CSTF2P33240 TCF12-208ENST00000557947 575 ntTSL 421.5■■□□□ 1.034e-7■■■■□ 22.7
CSTF2P33240 TCF12-215ENST00000560190 1183 ntTSL 1 (best)18.79■□□□□ 0.64e-7■■■■□ 22.7
CSTF2P33240 TCF12-210ENST00000558908 553 ntTSL 418.79■□□□□ 0.64e-7■■■■□ 22.7
CSTF2P33240 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.244e-7■■■■□ 22.7
CSTF2P33240 TCF12-212ENST00000559609 2252 ntTSL 212.31□□□□□ -0.444e-7■■■■□ 22.7
CSTF2P33240 TCF12-202ENST00000333725 4719 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.544e-7■■■■□ 22.7
CSTF2P33240 TCF12-204ENST00000438423 4786 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.584e-7■■■■□ 22.7
CSTF2P33240 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.264e-7■■■■□ 22.7
CSTF2P33240 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.421e-6■■■■□ 22.7
CSTF2P33240 TYMSOS-202ENST00000585033 560 ntTSL 219.23■□□□□ 0.673e-9■■■■□ 22.7
CSTF2P33240 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.29■□□□□ 0.523e-9■■■■□ 22.7
CSTF2P33240 VSNL1-202ENST00000404666 992 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.613e-7■■■■□ 22.7
CSTF2P33240 VSNL1-201ENST00000295156 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.843e-7■■■■□ 22.7
CSTF2P33240 VSNL1-204ENST00000451533 562 ntTSL 48.98□□□□□ -0.973e-7■■■■□ 22.7
CSTF2P33240 VSNL1-205ENST00000457525 576 ntTSL 36.25□□□□□ -1.413e-7■■■■□ 22.7
CSTF2P33240 PLCB1-234ENST00000637935 3316 ntTSL 52.41□□□□□ -2.023e-7■■■■□ 22.7
CSTF2P33240 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.19■□□□□ 0.666e-8■■■■□ 22.7
CSTF2P33240 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.136e-8■■■■□ 22.7
CSTF2P33240 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.23□□□□□ -0.136e-8■■■■□ 22.7
CSTF2P33240 TMCO3-205ENST00000465556 314 ntTSL 311.79□□□□□ -0.526e-8■■■■□ 22.7
CSTF2P33240 ANKRD11-205ENST00000562194 618 ntTSL 315.77■□□□□ 0.121e-19■■■■□ 22.6
CSTF2P33240 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.974e-6■■■■□ 22.6
CSTF2P33240 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.08■□□□□ 0.484e-8■■■■□ 22.6
CSTF2P33240 KRT8-210ENST00000548998 918 ntTSL 517.68■□□□□ 0.424e-8■■■■□ 22.6
CSTF2P33240 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.414e-8■■■■□ 22.6
CSTF2P33240 KRT8-204ENST00000546826 1165 ntTSL 516.6■□□□□ 0.254e-8■■■■□ 22.6
CSTF2P33240 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.024e-8■■■■□ 22.6
CSTF2P33240 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.03□□□□□ -0.164e-8■■■■□ 22.6
CSTF2P33240 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.66□□□□□ -0.224e-8■■■■□ 22.6
CSTF2P33240 PUS10-204ENST00000421319 571 ntTSL 413.13□□□□□ -0.314e-8■■■■□ 22.6
CSTF2P33240 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.47□□□□□ -1.214e-8■■■■□ 22.6
Retrieved 100 of 6,735 protein–RNA pairs in 178.3 ms