RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 PELP1Q8IZL8 1130 aaKnown RBP20.06■□□□□ 0.8
SHANK2-203ENST00000409161 DCAF8L2P0C7V8 631 aa19.61■□□□□ 0.73
SHANK2-203ENST00000409161 MYT1Q01538 1121 aa19.21■□□□□ 0.67
SHANK2-203ENST00000409161 CCER1Q8TC90 406 aaPredicted RBP19.06■□□□□ 0.64
SHANK2-203ENST00000409161 ERICH6Q7L0X2 663 aa18.92■□□□□ 0.62
SHANK2-203ENST00000409161 SUPT5HO00267 1087 aaKnown RBP18.89■□□□□ 0.61
SHANK2-203ENST00000409161 CENPBP07199 599 aaPredicted RBP18.81■□□□□ 0.6
SHANK2-203ENST00000409161 APLP2Q06481 763 aa18.8■□□□□ 0.6
SHANK2-203ENST00000409161 ZEB1P37275 1124 aaPredicted RBP18.63■□□□□ 0.57
SHANK2-203ENST00000409161 FAM9AQ8IZU1 332 aaPredicted RBP18.6■□□□□ 0.57
SHANK2-203ENST00000409161 NISCHQ9Y2I1 1504 aa18.54■□□□□ 0.56
SHANK2-203ENST00000409161 NEFLP07196 543 aa18.41■□□□□ 0.54
SHANK2-203ENST00000409161 YTHDC1Q96MU7 727 aaKnown RBP18.37■□□□□ 0.53
SHANK2-203ENST00000409161 SHROOM4Q9ULL8 1493 aa18.3■□□□□ 0.52
SHANK2-203ENST00000409161 EHMT2Q96KQ7 1210 aa18.22■□□□□ 0.51
SHANK2-203ENST00000409161 PCGF6Q9BYE7 350 aa18.21■□□□□ 0.51
SHANK2-203ENST00000409161 DAXXQ9UER7 740 aaPredicted RBP18.08■□□□□ 0.48
SHANK2-203ENST00000409161 TTBK1Q5TCY1 1321 aaPredicted RBP17.92■□□□□ 0.46
SHANK2-203ENST00000409161 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
SHANK2-203ENST00000409161 RTL5Q5HYW3 569 aaPredicted RBP17.69■□□□□ 0.42
SHANK2-203ENST00000409161 UBTFP17480 764 aaKnown RBP17.59■□□□□ 0.41
SHANK2-203ENST00000409161 ZNF316A6NFI3 1004 aaPredicted RBP17.59■□□□□ 0.41
SHANK2-203ENST00000409161 ATP1B4Q9UN42 357 aaPredicted RBP17.58■□□□□ 0.41
SHANK2-203ENST00000409161 TRIM26Q12899 539 aaPredicted RBP17.55■□□□□ 0.4
SHANK2-203ENST00000409161 RANGAP1P46060 587 aaPredicted RBP17.47■□□□□ 0.39
SHANK2-203ENST00000409161 HRCP23327 699 aa17.38■□□□□ 0.37
SHANK2-203ENST00000409161 CLSPNQ9HAW4 1339 aa17.31■□□□□ 0.36
SHANK2-203ENST00000409161 POLR3GLQ9BT43 218 aa17.15■□□□□ 0.34
SHANK2-203ENST00000409161 DIEXFQ68CQ4 756 aaKnown RBP17.12■□□□□ 0.33
SHANK2-203ENST00000409161 GLIPR1L2Q4G1C9 344 aa17.09■□□□□ 0.33
SHANK2-203ENST00000409161 CDK11AQ9UQ88 783 aaPredicted RBP17.09■□□□□ 0.33
SHANK2-203ENST00000409161 ZBTB47Q9UFB7 747 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-203ENST00000409161 MYT1LQ9UL68 1186 aa17.02■□□□□ 0.31
SHANK2-203ENST00000409161 ANP32BQ92688 251 aaKnown RBP16.96■□□□□ 0.31
SHANK2-203ENST00000409161 ITGAEP38570 1179 aa16.94■□□□□ 0.3
SHANK2-203ENST00000409161 ANP32AP39687 249 aaKnown RBP16.94■□□□□ 0.3
SHANK2-203ENST00000409161 SLC4A1APQ9BWU0 796 aaKnown RBP16.93■□□□□ 0.3
SHANK2-203ENST00000409161 PPARGC1BQ86YN6 1023 aaKnown RBP16.93■□□□□ 0.3
SHANK2-203ENST00000409161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
SHANK2-203ENST00000409161 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
SHANK2-203ENST00000409161 ANP32CO43423 234 aa16.87■□□□□ 0.29
SHANK2-203ENST00000409161 GTF3C3Q9Y5Q9 886 aa16.8■□□□□ 0.28
SHANK2-203ENST00000409161 CANXP27824 592 aaKnown RBP16.77■□□□□ 0.27
SHANK2-203ENST00000409161 CNGB1Q14028 1251 aaPredicted RBP16.75■□□□□ 0.27
SHANK2-203ENST00000409161 NEFMP07197 916 aa16.72■□□□□ 0.27
SHANK2-203ENST00000409161 EIF5BO60841 1220 aaKnown RBP16.69■□□□□ 0.26
SHANK2-203ENST00000409161 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
SHANK2-203ENST00000409161 BCANQ96GW7 911 aa16.64■□□□□ 0.25
SHANK2-203ENST00000409161 HSP90AA1P07900 732 aaKnown RBP16.63■□□□□ 0.25
SHANK2-203ENST00000409161 FAM50AQ14320 339 aaKnown RBP16.62■□□□□ 0.25
SHANK2-203ENST00000409161 TRIM52Q96A61 297 aa16.57■□□□□ 0.24
SHANK2-203ENST00000409161 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
SHANK2-203ENST00000409161 ACIN1Q9UKV3 1341 aaKnown RBP16.56■□□□□ 0.24
SHANK2-203ENST00000409161 LOC105371045A0A1W2PR82 267 aa16.55■□□□□ 0.24
SHANK2-203ENST00000409161 NEUROD1Q13562 356 aa16.5■□□□□ 0.23
SHANK2-203ENST00000409161 TNNT2P45379 298 aaPredicted RBP16.45■□□□□ 0.22
SHANK2-203ENST00000409161 ANP32EQ9BTT0 268 aa16.44■□□□□ 0.22
SHANK2-203ENST00000409161 NPM2Q86SE8 214 aaKnown RBP16.42■□□□□ 0.22
SHANK2-203ENST00000409161 SLC24A1O60721 1099 aa16.4■□□□□ 0.22
SHANK2-203ENST00000409161 ZNF326Q5BKZ1 582 aaKnown RBP16.38■□□□□ 0.21
SHANK2-203ENST00000409161 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.34■□□□□ 0.21
SHANK2-203ENST00000409161 CDK11BP21127 795 aaKnown RBP16.34■□□□□ 0.21
SHANK2-203ENST00000409161 BCL11AQ9H165 835 aa16.28■□□□□ 0.2
SHANK2-203ENST00000409161 DDRGK1Q96HY6 314 aa16.27■□□□□ 0.19
SHANK2-203ENST00000409161 FKBP8Q14318 412 aa16.27■□□□□ 0.19
SHANK2-203ENST00000409161 TRIM44Q96DX7 344 aaPredicted RBP16.26■□□□□ 0.19
SHANK2-203ENST00000409161 BECN1Q14457 450 aa16.26■□□□□ 0.19
SHANK2-203ENST00000409161 TONSLQ96HA7 1378 aa16.23■□□□□ 0.19
SHANK2-203ENST00000409161 CCDC136Q96JN2 1154 aa16.23■□□□□ 0.19
SHANK2-203ENST00000409161 GOLGA6L22H0YM25 854 aa16.21■□□□□ 0.18
SHANK2-203ENST00000409161 NBR1Q14596 966 aa16.2■□□□□ 0.18
SHANK2-203ENST00000409161 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
SHANK2-203ENST00000409161 MYH16Q9H6N6 1097 aa16.18■□□□□ 0.18
SHANK2-203ENST00000409161 NCLP19338 710 aaKnown RBP16.17■□□□□ 0.18
SHANK2-203ENST00000409161 HNRNPUQ00839 825 aaKnown RBP eCLIP16.17■□□□□ 0.18
SHANK2-203ENST00000409161 ERICH6BQ5W0A0 696 aa16.14■□□□□ 0.17
SHANK2-203ENST00000409161 TMC1Q8TDI8 760 aa16.07■□□□□ 0.16
SHANK2-203ENST00000409161 ZRSR1Q15695 479 aaKnown RBP16.06■□□□□ 0.16
SHANK2-203ENST00000409161 WDR43Q15061 677 aaKnown RBP eCLIP16.05■□□□□ 0.16
SHANK2-203ENST00000409161 CCDC180Q9P1Z9 1646 aa16.04■□□□□ 0.16
SHANK2-203ENST00000409161 ARXQ96QS3 562 aa16.02■□□□□ 0.15
SHANK2-203ENST00000409161 CASC1Q6TDU7 716 aa16.01■□□□□ 0.15
SHANK2-203ENST00000409161 GOLGA6L6A8MZA4 724 aa16■□□□□ 0.15
SHANK2-203ENST00000409161 PTMAP06454 111 aaKnown RBP16■□□□□ 0.15
SHANK2-203ENST00000409161 PPM1GO15355 546 aaPredicted RBP15.99■□□□□ 0.15
SHANK2-203ENST00000409161 FAM9BQ8IZU0 186 aa15.99■□□□□ 0.15
SHANK2-203ENST00000409161 DNTTIP2Q5QJE6 756 aaKnown RBP15.98■□□□□ 0.15
SHANK2-203ENST00000409161 ESF1Q9H501 851 aaKnown RBP15.96■□□□□ 0.15
SHANK2-203ENST00000409161 NRDCO43847 1150 aa15.96■□□□□ 0.15
SHANK2-203ENST00000409161 CHAF1AQ13111 956 aaPredicted RBP15.92■□□□□ 0.14
SHANK2-203ENST00000409161 MRS2Q9HD23 443 aa15.9■□□□□ 0.14
SHANK2-203ENST00000409161 NAP1L5Q96NT1 182 aaPredicted RBP15.89■□□□□ 0.13
SHANK2-203ENST00000409161 DDX10Q13206 875 aaKnown RBP15.89■□□□□ 0.13
SHANK2-203ENST00000409161 STAG3Q9UJ98 1225 aa15.88■□□□□ 0.13
SHANK2-203ENST00000409161 L1TD1Q5T7N2 865 aaKnown RBP15.84■□□□□ 0.13
SHANK2-203ENST00000409161 CHMP4BQ9H444 224 aaKnown RBP15.84■□□□□ 0.13
SHANK2-203ENST00000409161 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.13
SHANK2-203ENST00000409161 ZNF777Q9ULD5 760 aaPredicted RBP15.81■□□□□ 0.12
SHANK2-203ENST00000409161 FBLN2P98095 1184 aa15.81■□□□□ 0.12
SHANK2-203ENST00000409161 SCAF1Q9H7N4 1312 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms