RNA–Protein interactions for RNA: ENST00000557947.5

TCF12-208, Transcript of transcription factor 12, humanhuman

TSL 4

Gene TCF12, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-208ENST00000557947 NISCHQ9Y2I1 1504 aa54.34■■■■■ 6.29
TCF12-208ENST00000557947 CCDC180Q9P1Z9 1646 aa48.54■■■■■ 5.36
TCF12-208ENST00000557947 ABCC9O60706 1549 aa48.25■■■■■ 5.31
TCF12-208ENST00000557947 RB1CC1Q8TDY2 1594 aa46.02■■■■■ 4.96
TCF12-208ENST00000557947 NACADO15069 1562 aa45.82■■■■■ 4.93
TCF12-208ENST00000557947 DCAF8L2P0C7V8 631 aa45.65■■■■■ 4.9
TCF12-208ENST00000557947 MYO15BQ96JP2 1530 aa45.33■■■■■ 4.85
TCF12-208ENST00000557947 ZCCHC6Q5VYS8 1495 aaKnown RBP45.12■■■■■ 4.81
TCF12-208ENST00000557947 DNAJC5BQ9UF47 199 aa45.04■■■■■ 4.8
TCF12-208ENST00000557947 UNC13AQ9UPW8 1703 aa45.03■■■■■ 4.8
TCF12-208ENST00000557947 PABPN1Q86U42 306 aaKnown RBP eCLIP45■■■■■ 4.79
TCF12-208ENST00000557947 DCAF1Q9Y4B6 1507 aa44.9■■■■■ 4.78
TCF12-208ENST00000557947 BICRAQ9NZM4 1560 aa44.77■■■■■ 4.76
TCF12-208ENST00000557947 SCRIBQ14160 1630 aa44.28■■■■■ 4.68
TCF12-208ENST00000557947 SHROOM4Q9ULL8 1493 aa44.1■■■■■ 4.65
TCF12-208ENST00000557947 CC2D2AQ9P2K1 1620 aa43.59■■■■■ 4.57
TCF12-208ENST00000557947 EIF4G1Q04637 1599 aaKnown RBP43.58■■■■■ 4.57
TCF12-208ENST00000557947 CECR2Q9BXF3 1484 aa43.4■■■■■ 4.54
TCF12-208ENST00000557947 NCAPD3P42695 1498 aa42.34■■■■■ 4.37
TCF12-208ENST00000557947 SMARCA4P51532 1647 aa42.29■■■■■ 4.36
TCF12-208ENST00000557947 ATAD2BQ9ULI0 1458 aa42.27■■■■■ 4.36
TCF12-208ENST00000557947 BAZ1AQ9NRL2 1556 aaPredicted RBP42.11■■■■■ 4.33
TCF12-208ENST00000557947 SMARCA2P51531 1590 aa42.1■■■■■ 4.33
TCF12-208ENST00000557947 HMGXB3Q12766 1538 aa42.02■■■■■ 4.32
TCF12-208ENST00000557947 MROH2BQ7Z745 1585 aa41.91■■■■■ 4.3
TCF12-208ENST00000557947 PEG3Q9GZU2 1588 aa41.89■■■■■ 4.3
TCF12-208ENST00000557947 BAZ1BQ9UIG0 1483 aaKnown RBP41.83■■■■■ 4.29
TCF12-208ENST00000557947 NESP48681 1621 aa41.58■■■■■ 4.25
TCF12-208ENST00000557947 ERCC6Q03468 1493 aa41.55■■■■■ 4.24
TCF12-208ENST00000557947 WIZO95785 1651 aa41.39■■■■■ 4.22
TCF12-208ENST00000557947 CUX2O14529 1486 aa41.39■■■■■ 4.22
TCF12-208ENST00000557947 LAMC3Q9Y6N6 1575 aa41.28■■■■■ 4.2
TCF12-208ENST00000557947 RSF1Q96T23 1441 aaPredicted RBP41.17■■■■■ 4.18
TCF12-208ENST00000557947 CADPSQ9ULU8 1353 aa41.06■■■■■ 4.16
TCF12-208ENST00000557947 THOC2Q8NI27 1593 aaKnown RBP41.06■■■■■ 4.16
TCF12-208ENST00000557947 PDS5BQ9NTI5 1447 aa41.01■■■■■ 4.16
TCF12-208ENST00000557947 KIF21AQ7Z4S6 1674 aa41.01■■■■■ 4.15
TCF12-208ENST00000557947 DNAJC5Q9H3Z4 198 aa41■■■■■ 4.15
TCF12-208ENST00000557947 TOP2AP11388 1531 aaKnown RBP40.88■■■■■ 4.13
TCF12-208ENST00000557947 CFTRP13569 1480 aa40.68■■■■■ 4.1
TCF12-208ENST00000557947 MRC2Q9UBG0 1479 aa40.66■■■■■ 4.1
TCF12-208ENST00000557947 FANCD2Q9BXW9 1451 aa40.58■■■■■ 4.09
TCF12-208ENST00000557947 WDR62O43379 1518 aa40.57■■■■■ 4.08
TCF12-208ENST00000557947 CEP164Q9UPV0 1460 aa40.56■■■■■ 4.08
TCF12-208ENST00000557947 CCDC88BA6NC98 1476 aa40.45■■■■■ 4.07
TCF12-208ENST00000557947 URB2Q14146 1524 aaKnown RBP40.26■■■■■ 4.04
TCF12-208ENST00000557947 PRDM2Q13029 1718 aa40.22■■■■■ 4.03
TCF12-208ENST00000557947 TOPBP1Q92547 1522 aa39.87■■■■□ 3.97
TCF12-208ENST00000557947 IFT140Q96RY7 1462 aa39.75■■■■□ 3.95
TCF12-208ENST00000557947 ABCC8Q09428 1581 aa39.74■■■■□ 3.95
TCF12-208ENST00000557947 DNMBPQ6XZF7 1577 aa39.72■■■■□ 3.95
TCF12-208ENST00000557947 ZNF608Q9ULD9 1512 aaPredicted RBP39.71■■■■□ 3.95
TCF12-208ENST00000557947 SUPT5HO00267 1087 aaKnown RBP39.57■■■■□ 3.93
TCF12-208ENST00000557947 OSCARQ8IYS5 282 aa39.56■■■■□ 3.92
TCF12-208ENST00000557947 TARBP1Q13395 1621 aaKnown RBP39.51■■■■□ 3.91
TCF12-208ENST00000557947 POLA1P09884 1462 aaPredicted RBP39.49■■■■□ 3.91
TCF12-208ENST00000557947 EIF4G3O43432 1585 aaKnown RBP39.46■■■■□ 3.91
TCF12-208ENST00000557947 AQRO60306 1485 aaKnown RBP eCLIP39.38■■■■□ 3.98e-11■□□□□ 8.6
TCF12-208ENST00000557947 RAD54L2Q9Y4B4 1467 aa39.36■■■■□ 3.89
TCF12-208ENST00000557947 CUX1P39880 1505 aa39.34■■■■□ 3.89
TCF12-208ENST00000557947 TRIM41Q8WV44 630 aa39.31■■■■□ 3.88
TCF12-208ENST00000557947 SOGA1O94964 1423 aa39.3■■■■□ 3.88
TCF12-208ENST00000557947 FGD5Q6ZNL6 1462 aa39.29■■■■□ 3.88
TCF12-208ENST00000557947 TDRD9Q8NDG6 1382 aaKnown RBP39.21■■■■□ 3.87
TCF12-208ENST00000557947 CHD1O14646 1710 aa39.08■■■■□ 3.85
TCF12-208ENST00000557947 WDR97A6NE52 1622 aa39.04■■■■□ 3.84
TCF12-208ENST00000557947 RIMBP3CA6NJZ7 1639 aa39.03■■■■□ 3.84
TCF12-208ENST00000557947 RIMBP3BA6NNM3 1639 aa39.03■■■■□ 3.84
TCF12-208ENST00000557947 RIMBP3Q9UFD9 1639 aa39.03■■■■□ 3.84
TCF12-208ENST00000557947 FBLN2P98095 1184 aa38.98■■■■□ 3.83
TCF12-208ENST00000557947 SNAPC4Q5SXM2 1469 aa38.97■■■■□ 3.83
TCF12-208ENST00000557947 ARHGEF11O15085 1522 aa38.95■■■■□ 3.83
TCF12-208ENST00000557947 GRIN2BQ13224 1484 aa38.9■■■■□ 3.82
TCF12-208ENST00000557947 ABCA10Q8WWZ4 1543 aa38.86■■■■□ 3.81
TCF12-208ENST00000557947 MAGI1Q96QZ7 1491 aaPredicted RBP38.86■■■■□ 3.81
TCF12-208ENST00000557947 GAPVD1Q14C86 1478 aa38.82■■■■□ 3.81
TCF12-208ENST00000557947 WRNQ14191 1432 aaPredicted RBP eCLIP38.78■■■■□ 3.8
TCF12-208ENST00000557947 TOP2BQ02880 1626 aa38.77■■■■□ 3.8
TCF12-208ENST00000557947 ABCA5Q8WWZ7 1642 aa38.77■■■■□ 3.8
TCF12-208ENST00000557947 BIVM-ERCC5R4GMW8 1640 aa38.77■■■■□ 3.8
TCF12-208ENST00000557947 SYNJ1O43426 1573 aa38.76■■■■□ 3.8
TCF12-208ENST00000557947 CHMP7Q8WUX9 453 aaPredicted RBP38.76■■■■□ 3.8
TCF12-208ENST00000557947 PBRM1Q86U86 1689 aa38.75■■■■□ 3.79
TCF12-208ENST00000557947 SYNJ2O15056 1496 aa38.73■■■■□ 3.79
TCF12-208ENST00000557947 CLASP1Q7Z460 1538 aa38.69■■■■□ 3.78
TCF12-208ENST00000557947 CYB5RLQ6IPT4 315 aa38.63■■■■□ 3.77
TCF12-208ENST00000557947 ARAP1Q96P48 1450 aa38.62■■■■□ 3.77
TCF12-208ENST00000557947 ADAMTS12P58397 1594 aa38.44■■■■□ 3.74
TCF12-208ENST00000557947 GRIN2AQ12879 1464 aa38.41■■■■□ 3.74
TCF12-208ENST00000557947 ERICH3Q5RHP9 1530 aa38.36■■■■□ 3.73
TCF12-208ENST00000557947 FHAD1B1AJZ9 1412 aa38.34■■■■□ 3.73
TCF12-208ENST00000557947 NUP160Q12769 1436 aa38.29■■■■□ 3.72
TCF12-208ENST00000557947 CEP170Q5SW79 1584 aa38.28■■■■□ 3.72
TCF12-208ENST00000557947 ERCC6L2Q5T890 1561 aa38.16■■■■□ 3.7
TCF12-208ENST00000557947 SHROOM2Q13796 1616 aa38.07■■■■□ 3.68
TCF12-208ENST00000557947 TRHP20396 242 aaPredicted RBP38.03■■■■□ 3.68
TCF12-208ENST00000557947 IGF1RP08069 1367 aa38.02■■■■□ 3.68
TCF12-208ENST00000557947 KIF27Q86VH2 1401 aa37.99■■■■□ 3.67
TCF12-208ENST00000557947 RUSC2Q8N2Y8 1516 aa37.89■■■■□ 3.66
TCF12-208ENST00000557947 JPH4Q96JJ6 628 aa37.89■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms