RNA–Protein interactions for RNA: ENST00000466575.5

AGAP1-210, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, humanhuman

TSL 3

Gene AGAP1, Length 541 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP1-210ENST00000466575 NISCHQ9Y2I1 1504 aa36.38■■■■□ 3.41
AGAP1-210ENST00000466575 CCDC180Q9P1Z9 1646 aa32.52■■■□□ 2.8
AGAP1-210ENST00000466575 ABCC9O60706 1549 aa32.09■■■□□ 2.73
AGAP1-210ENST00000466575 RB1CC1Q8TDY2 1594 aa30.8■■■□□ 2.52
AGAP1-210ENST00000466575 NACADO15069 1562 aa30.67■■■□□ 2.5
AGAP1-210ENST00000466575 DCAF8L2P0C7V8 631 aa30.67■■■□□ 2.5
AGAP1-210ENST00000466575 MYO15BQ96JP2 1530 aa30.35■■■□□ 2.45
AGAP1-210ENST00000466575 ZCCHC6Q5VYS8 1495 aaKnown RBP30.2■■■□□ 2.43
AGAP1-210ENST00000466575 DCAF1Q9Y4B6 1507 aa30.1■■■□□ 2.41
AGAP1-210ENST00000466575 UNC13AQ9UPW8 1703 aa30.01■■■□□ 2.39
AGAP1-210ENST00000466575 PABPN1Q86U42 306 aaKnown RBP eCLIP29.94■■■□□ 2.38
AGAP1-210ENST00000466575 BICRAQ9NZM4 1560 aa29.73■■■□□ 2.35
AGAP1-210ENST00000466575 DNAJC5BQ9UF47 199 aa29.64■■■□□ 2.34
AGAP1-210ENST00000466575 SCRIBQ14160 1630 aa29.61■■■□□ 2.33
AGAP1-210ENST00000466575 SHROOM4Q9ULL8 1493 aa29.53■■■□□ 2.32
AGAP1-210ENST00000466575 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
AGAP1-210ENST00000466575 CC2D2AQ9P2K1 1620 aa29.01■■■□□ 2.23
AGAP1-210ENST00000466575 CECR2Q9BXF3 1484 aa28.9■■■□□ 2.22
AGAP1-210ENST00000466575 SMARCA4P51532 1647 aa28.29■■■□□ 2.12
AGAP1-210ENST00000466575 BAZ1AQ9NRL2 1556 aaPredicted RBP28.27■■■□□ 2.12
AGAP1-210ENST00000466575 NCAPD3P42695 1498 aa28.26■■■□□ 2.11
AGAP1-210ENST00000466575 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
AGAP1-210ENST00000466575 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
AGAP1-210ENST00000466575 HMGXB3Q12766 1538 aa28.1■■■□□ 2.09
AGAP1-210ENST00000466575 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
AGAP1-210ENST00000466575 PEG3Q9GZU2 1588 aa28.01■■■□□ 2.07
AGAP1-210ENST00000466575 MROH2BQ7Z745 1585 aa27.99■■■□□ 2.07
AGAP1-210ENST00000466575 ERCC6Q03468 1493 aa27.78■■■□□ 2.04
AGAP1-210ENST00000466575 WIZO95785 1651 aa27.7■■■□□ 2.02
AGAP1-210ENST00000466575 NESP48681 1621 aa27.63■■■□□ 2.01
AGAP1-210ENST00000466575 LAMC3Q9Y6N6 1575 aa27.61■■■□□ 2.01
AGAP1-210ENST00000466575 RSF1Q96T23 1441 aaPredicted RBP27.57■■■□□ 2
AGAP1-210ENST00000466575 CUX2O14529 1486 aa27.56■■■□□ 2
AGAP1-210ENST00000466575 PDS5BQ9NTI5 1447 aa27.48■■□□□ 1.99
AGAP1-210ENST00000466575 CADPSQ9ULU8 1353 aa27.45■■□□□ 1.98
AGAP1-210ENST00000466575 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
AGAP1-210ENST00000466575 KIF21AQ7Z4S6 1674 aa27.34■■□□□ 1.97
AGAP1-210ENST00000466575 THOC2Q8NI27 1593 aaKnown RBP27.28■■□□□ 1.96
AGAP1-210ENST00000466575 CFTRP13569 1480 aa27.19■■□□□ 1.94
AGAP1-210ENST00000466575 MRC2Q9UBG0 1479 aa27.15■■□□□ 1.94
AGAP1-210ENST00000466575 CEP164Q9UPV0 1460 aa27.15■■□□□ 1.94
AGAP1-210ENST00000466575 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
AGAP1-210ENST00000466575 CCDC88BA6NC98 1476 aa27.07■■□□□ 1.92
AGAP1-210ENST00000466575 DNAJC5Q9H3Z4 198 aa27.07■■□□□ 1.92
AGAP1-210ENST00000466575 WDR62O43379 1518 aa27.04■■□□□ 1.92
AGAP1-210ENST00000466575 PRDM2Q13029 1718 aa27.02■■□□□ 1.92
AGAP1-210ENST00000466575 URB2Q14146 1524 aaKnown RBP26.81■■□□□ 1.88
AGAP1-210ENST00000466575 SUPT5HO00267 1087 aaKnown RBP26.75■■□□□ 1.87
AGAP1-210ENST00000466575 ABCC8Q09428 1581 aa26.73■■□□□ 1.87
AGAP1-210ENST00000466575 TOPBP1Q92547 1522 aa26.63■■□□□ 1.85
AGAP1-210ENST00000466575 DNMBPQ6XZF7 1577 aa26.6■■□□□ 1.85
AGAP1-210ENST00000466575 IFT140Q96RY7 1462 aa26.6■■□□□ 1.85
AGAP1-210ENST00000466575 OSCARQ8IYS5 282 aa26.43■■□□□ 1.82
AGAP1-210ENST00000466575 ZNF608Q9ULD9 1512 aaPredicted RBP26.4■■□□□ 1.82
AGAP1-210ENST00000466575 POLA1P09884 1462 aaPredicted RBP26.37■■□□□ 1.81
AGAP1-210ENST00000466575 TARBP1Q13395 1621 aaKnown RBP26.34■■□□□ 1.81
AGAP1-210ENST00000466575 EIF4G3O43432 1585 aaKnown RBP26.33■■□□□ 1.81
AGAP1-210ENST00000466575 SOGA1O94964 1423 aa26.32■■□□□ 1.8
AGAP1-210ENST00000466575 FGD5Q6ZNL6 1462 aa26.28■■□□□ 1.8
AGAP1-210ENST00000466575 CUX1P39880 1505 aa26.28■■□□□ 1.8
AGAP1-210ENST00000466575 AQRO60306 1485 aaKnown RBP eCLIP26.26■■□□□ 1.79
AGAP1-210ENST00000466575 RAD54L2Q9Y4B4 1467 aa26.25■■□□□ 1.79
AGAP1-210ENST00000466575 WDR97A6NE52 1622 aa26.21■■□□□ 1.79
AGAP1-210ENST00000466575 TDRD9Q8NDG6 1382 aaKnown RBP26.18■■□□□ 1.78
AGAP1-210ENST00000466575 FBLN2P98095 1184 aa26.14■■□□□ 1.78
AGAP1-210ENST00000466575 TRIM41Q8WV44 630 aa26.09■■□□□ 1.77
AGAP1-210ENST00000466575 CHD1O14646 1710 aa26.08■■□□□ 1.77
AGAP1-210ENST00000466575 WRNQ14191 1432 aaPredicted RBP eCLIP26.07■■□□□ 1.76
AGAP1-210ENST00000466575 GRIN2BQ13224 1484 aa26.05■■□□□ 1.76
AGAP1-210ENST00000466575 TOP2BQ02880 1626 aa26.03■■□□□ 1.76
AGAP1-210ENST00000466575 CHMP7Q8WUX9 453 aaPredicted RBP26.02■■□□□ 1.76
AGAP1-210ENST00000466575 SNAPC4Q5SXM2 1469 aa26.02■■□□□ 1.76
AGAP1-210ENST00000466575 MAGI1Q96QZ7 1491 aaPredicted RBP26.02■■□□□ 1.76
AGAP1-210ENST00000466575 ABCA10Q8WWZ4 1543 aa26.02■■□□□ 1.76
AGAP1-210ENST00000466575 BIVM-ERCC5R4GMW8 1640 aa26.02■■□□□ 1.76
AGAP1-210ENST00000466575 GAPVD1Q14C86 1478 aa26.01■■□□□ 1.75
AGAP1-210ENST00000466575 PBRM1Q86U86 1689 aa25.96■■□□□ 1.75
AGAP1-210ENST00000466575 SYNJ1O43426 1573 aa25.95■■□□□ 1.74
AGAP1-210ENST00000466575 RIMBP3CA6NJZ7 1639 aa25.93■■□□□ 1.74
AGAP1-210ENST00000466575 RIMBP3BA6NNM3 1639 aa25.93■■□□□ 1.74
AGAP1-210ENST00000466575 RIMBP3Q9UFD9 1639 aa25.93■■□□□ 1.74
AGAP1-210ENST00000466575 ABCA5Q8WWZ7 1642 aa25.92■■□□□ 1.74
AGAP1-210ENST00000466575 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
AGAP1-210ENST00000466575 ARHGEF11O15085 1522 aa25.89■■□□□ 1.74
AGAP1-210ENST00000466575 CYB5RLQ6IPT4 315 aa25.75■■□□□ 1.71
AGAP1-210ENST00000466575 CLASP1Q7Z460 1538 aa25.74■■□□□ 1.71
AGAP1-210ENST00000466575 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
AGAP1-210ENST00000466575 FHAD1B1AJZ9 1412 aa25.71■■□□□ 1.71
AGAP1-210ENST00000466575 ADAMTS12P58397 1594 aa25.69■■□□□ 1.7
AGAP1-210ENST00000466575 GRIN2AQ12879 1464 aa25.69■■□□□ 1.7
AGAP1-210ENST00000466575 ARAP1Q96P48 1450 aa25.62■■□□□ 1.69
AGAP1-210ENST00000466575 KIF27Q86VH2 1401 aa25.59■■□□□ 1.69
AGAP1-210ENST00000466575 NUP160Q12769 1436 aa25.55■■□□□ 1.68
AGAP1-210ENST00000466575 CEP170Q5SW79 1584 aa25.52■■□□□ 1.68
AGAP1-210ENST00000466575 CUL7Q14999 1698 aa25.46■■□□□ 1.67
AGAP1-210ENST00000466575 IGF1RP08069 1367 aa25.44■■□□□ 1.66
AGAP1-210ENST00000466575 TRHP20396 242 aaPredicted RBP25.4■■□□□ 1.66
AGAP1-210ENST00000466575 SHROOM2Q13796 1616 aa25.4■■□□□ 1.66
AGAP1-210ENST00000466575 JPH4Q96JJ6 628 aa25.38■■□□□ 1.65
AGAP1-210ENST00000466575 CARMIL1Q5VZK9 1371 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 231.8 ms