RNA–Protein interactions for RNA: ENST00000264932.10

SDHA-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHA, Length 2,390 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-201ENST00000264932 NISCHQ9Y2I1 1504 aa40.56■■■■■ 4.08
SDHA-201ENST00000264932 SHROOM4Q9ULL8 1493 aa34.7■■■■□ 3.15
SDHA-201ENST00000264932 CCDC180Q9P1Z9 1646 aa34.35■■■■□ 3.09
SDHA-201ENST00000264932 ZCCHC6Q5VYS8 1495 aaKnown RBP34.29■■■■□ 3.08
SDHA-201ENST00000264932 SUPT5HO00267 1087 aaKnown RBP34.07■■■■□ 3.05
SDHA-201ENST00000264932 DCAF8L2P0C7V8 631 aa33.76■■■□□ 2.99
SDHA-201ENST00000264932 DCAF1Q9Y4B6 1507 aa33.21■■■□□ 2.91
SDHA-201ENST00000264932 CHIC1Q5VXU3 224 aa33.14■■■□□ 2.9
SDHA-201ENST00000264932 MYO15BQ96JP2 1530 aa32.98■■■□□ 2.87
SDHA-201ENST00000264932 ABCC9O60706 1549 aa32.31■■■□□ 2.76
SDHA-201ENST00000264932 SCRIBQ14160 1630 aa32.29■■■□□ 2.76
SDHA-201ENST00000264932 LOC105371045A0A1W2PR82 267 aa32.22■■■□□ 2.75
SDHA-201ENST00000264932 RSF1Q96T23 1441 aaPredicted RBP32.16■■■□□ 2.74
SDHA-201ENST00000264932 PCGF6Q9BYE7 350 aa32.15■■■□□ 2.74
SDHA-201ENST00000264932 HRCP23327 699 aa32.14■■■□□ 2.73
SDHA-201ENST00000264932 NACADO15069 1562 aa31.82■■■□□ 2.68
SDHA-201ENST00000264932 RB1CC1Q8TDY2 1594 aa31.76■■■□□ 2.67
SDHA-201ENST00000264932 TRIM41Q8WV44 630 aa31.71■■■□□ 2.67
SDHA-201ENST00000264932 CECR2Q9BXF3 1484 aa31.7■■■□□ 2.67
SDHA-201ENST00000264932 MROH2BQ7Z745 1585 aa31.56■■■□□ 2.64
SDHA-201ENST00000264932 PPARGC1BQ86YN6 1023 aaKnown RBP31.54■■■□□ 2.64
SDHA-201ENST00000264932 TRIM26Q12899 539 aaPredicted RBP31.49■■■□□ 2.63
SDHA-201ENST00000264932 FAM9AQ8IZU1 332 aaPredicted RBP31.49■■■□□ 2.63
SDHA-201ENST00000264932 WIZO95785 1651 aa31.36■■■□□ 2.61
SDHA-201ENST00000264932 EHMT2Q96KQ7 1210 aa31.25■■■□□ 2.59
SDHA-201ENST00000264932 BAZ1AQ9NRL2 1556 aaPredicted RBP31.1■■■□□ 2.57
SDHA-201ENST00000264932 UNC13AQ9UPW8 1703 aa31.01■■■□□ 2.55
SDHA-201ENST00000264932 EIF4G1Q04637 1599 aaKnown RBP30.91■■■□□ 2.54
SDHA-201ENST00000264932 SMARCA4P51532 1647 aa30.84■■■□□ 2.53
SDHA-201ENST00000264932 TOP2AP11388 1531 aaKnown RBP30.83■■■□□ 2.53
SDHA-201ENST00000264932 CCDC88BA6NC98 1476 aa30.79■■■□□ 2.52
SDHA-201ENST00000264932 ZEB1P37275 1124 aaPredicted RBP30.75■■■□□ 2.51
SDHA-201ENST00000264932 PABPN1Q86U42 306 aaKnown RBP eCLIP30.72■■■□□ 2.51
SDHA-201ENST00000264932 ABCC8Q09428 1581 aa30.7■■■□□ 2.51
SDHA-201ENST00000264932 SMARCA2P51531 1590 aa30.69■■■□□ 2.5
SDHA-201ENST00000264932 BICRAQ9NZM4 1560 aa30.65■■■□□ 2.5
SDHA-201ENST00000264932 SOGA1O94964 1423 aa30.48■■■□□ 2.47
SDHA-201ENST00000264932 RUSC2Q8N2Y8 1516 aa30.33■■■□□ 2.45
SDHA-201ENST00000264932 CSRNP3Q8WYN3 585 aa30.32■■■□□ 2.44
SDHA-201ENST00000264932 CEP162Q5TB80 1403 aa30.3■■■□□ 2.44
SDHA-201ENST00000264932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.28■■■□□ 2.44
SDHA-201ENST00000264932 TNIKQ9UKE5 1360 aa30.26■■■□□ 2.43
SDHA-201ENST00000264932 WRNQ14191 1432 aaPredicted RBP eCLIP30.25■■■□□ 2.43
SDHA-201ENST00000264932 TTBK1Q5TCY1 1321 aaPredicted RBP30.23■■■□□ 2.43
SDHA-201ENST00000264932 PEG3Q9GZU2 1588 aa30.23■■■□□ 2.43
SDHA-201ENST00000264932 EEA1Q15075 1411 aa30.21■■■□□ 2.43
SDHA-201ENST00000264932 UBTFP17480 764 aaKnown RBP30.2■■■□□ 2.43
SDHA-201ENST00000264932 CCER1Q8TC90 406 aaPredicted RBP30.16■■■□□ 2.42
SDHA-201ENST00000264932 ATAD2BQ9ULI0 1458 aa30.1■■■□□ 2.41
SDHA-201ENST00000264932 GOLGA3Q08378 1498 aa30.03■■■□□ 2.4
SDHA-201ENST00000264932 SYNJ1O43426 1573 aa30■■■□□ 2.39
SDHA-201ENST00000264932 BAZ1BQ9UIG0 1483 aaKnown RBP29.99■■■□□ 2.39
SDHA-201ENST00000264932 CEP164Q9UPV0 1460 aa29.86■■■□□ 2.37
SDHA-201ENST00000264932 KIF21BO75037 1637 aa29.78■■■□□ 2.36
SDHA-201ENST00000264932 CLIP1P30622 1438 aa29.73■■■□□ 2.35
SDHA-201ENST00000264932 RAPGEF2Q9Y4G8 1499 aa29.7■■■□□ 2.35
SDHA-201ENST00000264932 SCAF1Q9H7N4 1312 aaKnown RBP29.65■■■□□ 2.34
SDHA-201ENST00000264932 RANGAP1P46060 587 aaPredicted RBP29.63■■■□□ 2.33
SDHA-201ENST00000264932 TOP2BQ02880 1626 aa29.61■■■□□ 2.33
SDHA-201ENST00000264932 VPS8Q8N3P4 1428 aa29.59■■■□□ 2.33
SDHA-201ENST00000264932 DIEXFQ68CQ4 756 aaKnown RBP29.59■■■□□ 2.33
SDHA-201ENST00000264932 HNRNPUL2Q1KMD3 747 aaKnown RBP29.57■■■□□ 2.32
SDHA-201ENST00000264932 NCAPD3P42695 1498 aa29.5■■■□□ 2.31
SDHA-201ENST00000264932 APLP2Q06481 763 aa29.48■■■□□ 2.31
SDHA-201ENST00000264932 BIVM-ERCC5R4GMW8 1640 aa29.46■■■□□ 2.31
SDHA-201ENST00000264932 HMGXB3Q12766 1538 aa29.44■■■□□ 2.3
SDHA-201ENST00000264932 PRXQ9BXM0 1461 aa29.39■■■□□ 2.3
SDHA-201ENST00000264932 CUX1P39880 1505 aa29.36■■■□□ 2.29
SDHA-201ENST00000264932 ZNF316A6NFI3 1004 aaPredicted RBP29.35■■■□□ 2.29
SDHA-201ENST00000264932 NEUROD1Q13562 356 aa29.34■■■□□ 2.29
SDHA-201ENST00000264932 ACIN1Q9UKV3 1341 aaKnown RBP29.34■■■□□ 2.29
SDHA-201ENST00000264932 ERICH3Q5RHP9 1530 aa29.3■■■□□ 2.28
SDHA-201ENST00000264932 CFTRP13569 1480 aa29.28■■■□□ 2.28
SDHA-201ENST00000264932 ARAP1Q96P48 1450 aa29.24■■■□□ 2.27
SDHA-201ENST00000264932 KIF27Q86VH2 1401 aa29.23■■■□□ 2.27
SDHA-201ENST00000264932 KANK4Q5T7N3 995 aaPredicted RBP29.2■■■□□ 2.26
SDHA-201ENST00000264932 CENPBP07199 599 aaPredicted RBP29.11■■■□□ 2.25
SDHA-201ENST00000264932 GTF3C3Q9Y5Q9 886 aa29.02■■■□□ 2.24
SDHA-201ENST00000264932 ARHGAP35Q9NRY4 1499 aa29■■■□□ 2.23
SDHA-201ENST00000264932 IGF1RP08069 1367 aa28.99■■■□□ 2.23
SDHA-201ENST00000264932 MIER1Q8N108 512 aa28.98■■■□□ 2.23
SDHA-201ENST00000264932 CADPSQ9ULU8 1353 aa28.97■■■□□ 2.23
SDHA-201ENST00000264932 CUX2O14529 1486 aa28.96■■■□□ 2.23
SDHA-201ENST00000264932 DHX57Q6P158 1386 aaKnown RBP28.95■■■□□ 2.23
SDHA-201ENST00000264932 CC2D2AQ9P2K1 1620 aa28.93■■■□□ 2.22
SDHA-201ENST00000264932 RRBP1Q9P2E9 1410 aaKnown RBP28.92■■■□□ 2.22
SDHA-201ENST00000264932 YTHDC1Q96MU7 727 aaKnown RBP28.9■■■□□ 2.22
SDHA-201ENST00000264932 PRDM2Q13029 1718 aa28.89■■■□□ 2.22
SDHA-201ENST00000264932 CLSPNQ9HAW4 1339 aa28.88■■■□□ 2.21
SDHA-201ENST00000264932 PELP1Q8IZL8 1130 aaKnown RBP28.87■■■□□ 2.21
SDHA-201ENST00000264932 CARMIL1Q5VZK9 1371 aa28.84■■■□□ 2.21
SDHA-201ENST00000264932 FGD5Q6ZNL6 1462 aa28.83■■■□□ 2.21
SDHA-201ENST00000264932 CCNB3Q8WWL7 1395 aa28.82■■■□□ 2.2
SDHA-201ENST00000264932 ITGAEP38570 1179 aa28.78■■■□□ 2.2
SDHA-201ENST00000264932 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
SDHA-201ENST00000264932 P3H3Q8IVL6 736 aa28.64■■■□□ 2.18
SDHA-201ENST00000264932 TIAM1Q13009 1591 aa28.63■■■□□ 2.17
SDHA-201ENST00000264932 NESP48681 1621 aa28.62■■■□□ 2.17
SDHA-201ENST00000264932 MAP3K1Q13233 1512 aa28.6■■■□□ 2.17
SDHA-201ENST00000264932 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms