RNA–Protein interactions for RNA: ENST00000577968.1

CCDC144NL-AS1-210, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 821 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-210ENST00000577968 AEBP2Q6ZN18 517 aaPredicted RBP29.26■■■□□ 2.27
CCDC144NL-AS1-210ENST00000577968 CHIC1Q5VXU3 224 aa28.36■■■□□ 2.13
CCDC144NL-AS1-210ENST00000577968 SENP3Q9H4L4 574 aaPredicted RBP24.99■■□□□ 1.59
CCDC144NL-AS1-210ENST00000577968 PHF23Q9BUL5 403 aaPredicted RBP24.83■■□□□ 1.57
CCDC144NL-AS1-210ENST00000577968 FOXD1Q16676 465 aa23.15■■□□□ 1.3
CCDC144NL-AS1-210ENST00000577968 PLPPR3Q6T4P5 718 aa22.93■■□□□ 1.26
CCDC144NL-AS1-210ENST00000577968 PPP6R1Q9UPN7 881 aa21.99■■□□□ 1.11
CCDC144NL-AS1-210ENST00000577968 ADRA2BP18089 450 aa21.97■■□□□ 1.11
CCDC144NL-AS1-210ENST00000577968 PIAS4Q8N2W9 510 aaPredicted RBP21.79■■□□□ 1.08
CCDC144NL-AS1-210ENST00000577968 MSH5O43196 834 aa21.57■■□□□ 1.04
CCDC144NL-AS1-210ENST00000577968 SCAF1Q9H7N4 1312 aaKnown RBP20.26■□□□□ 0.83
CCDC144NL-AS1-210ENST00000577968 PPP4R3CPQ6ZMV5 832 aa20.13■□□□□ 0.81
CCDC144NL-AS1-210ENST00000577968 POTEDQ86YR6 584 aa20.09■□□□□ 0.81
CCDC144NL-AS1-210ENST00000577968 MAPK8IP2Q13387 824 aaPredicted RBP20■□□□□ 0.79
CCDC144NL-AS1-210ENST00000577968 DMRT2Q9Y5R5 561 aa19.88■□□□□ 0.77
CCDC144NL-AS1-210ENST00000577968 CNKSR2Q8WXI2 1034 aa19.67■□□□□ 0.74
CCDC144NL-AS1-210ENST00000577968 NCBP3Q53F19 620 aaKnown RBP19.59■□□□□ 0.73
CCDC144NL-AS1-210ENST00000577968 HOXD11P31277 338 aaPredicted RBP19.36■□□□□ 0.69
CCDC144NL-AS1-210ENST00000577968 RNF216Q9NWF9 866 aaPredicted RBP19.36■□□□□ 0.69
CCDC144NL-AS1-210ENST00000577968 KCNA4P22459 653 aa19.26■□□□□ 0.67
CCDC144NL-AS1-210ENST00000577968 NPM3O75607 178 aaKnown RBP19.2■□□□□ 0.66
CCDC144NL-AS1-210ENST00000577968 DCAF8L1A6NGE4 600 aa18.99■□□□□ 0.63
CCDC144NL-AS1-210ENST00000577968 DNAJC5BQ9UF47 199 aa18.79■□□□□ 0.6
CCDC144NL-AS1-210ENST00000577968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.44■□□□□ 0.54
CCDC144NL-AS1-210ENST00000577968 RNF39Q9H2S5 420 aa18.4■□□□□ 0.54
CCDC144NL-AS1-210ENST00000577968 SLC4A1APQ9BWU0 796 aaKnown RBP18.34■□□□□ 0.53
CCDC144NL-AS1-210ENST00000577968 C1QBPQ07021 282 aaKnown RBP18.21■□□□□ 0.51
CCDC144NL-AS1-210ENST00000577968 SLC4A2P04920 1241 aa18.19■□□□□ 0.5
CCDC144NL-AS1-210ENST00000577968 CACNB1Q02641 598 aaPredicted RBP18.15■□□□□ 0.5
CCDC144NL-AS1-210ENST00000577968 U3KPZ7 1027 aaPredicted RBP18.07■□□□□ 0.48
CCDC144NL-AS1-210ENST00000577968 FOXD4L1Q9NU39 408 aa17.89■□□□□ 0.45
CCDC144NL-AS1-210ENST00000577968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
CCDC144NL-AS1-210ENST00000577968 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
CCDC144NL-AS1-210ENST00000577968 MYCNP04198 464 aaPredicted RBP17.82■□□□□ 0.44
CCDC144NL-AS1-210ENST00000577968 APLP2Q06481 763 aa17.77■□□□□ 0.44
CCDC144NL-AS1-210ENST00000577968 SAMD1Q6SPF0 538 aaPredicted RBP17.75■□□□□ 0.43
CCDC144NL-AS1-210ENST00000577968 ZBTB22O15209 634 aa17.69■□□□□ 0.42
CCDC144NL-AS1-210ENST00000577968 CAPN15O75808 1086 aa17.62■□□□□ 0.41
CCDC144NL-AS1-210ENST00000577968 SPINK5Q9NQ38 1064 aaPredicted RBP17.62■□□□□ 0.41
CCDC144NL-AS1-210ENST00000577968 ZNF219Q9P2Y4 722 aaPredicted RBP17.51■□□□□ 0.39
CCDC144NL-AS1-210ENST00000577968 TRHP20396 242 aaPredicted RBP17.44■□□□□ 0.38
CCDC144NL-AS1-210ENST00000577968 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
CCDC144NL-AS1-210ENST00000577968 DSG3P32926 999 aa17.39■□□□□ 0.37
CCDC144NL-AS1-210ENST00000577968 CSRNP3Q8WYN3 585 aa17.37■□□□□ 0.37
CCDC144NL-AS1-210ENST00000577968 ATXN8OSP0DMR3 200 aa17.34■□□□□ 0.37
CCDC144NL-AS1-210ENST00000577968 ATF5Q9Y2D1 282 aaPredicted RBP17.24■□□□□ 0.35
CCDC144NL-AS1-210ENST00000577968 ABCB7O75027 752 aa17.21■□□□□ 0.35
CCDC144NL-AS1-210ENST00000577968 POLA2Q14181 598 aa17.1■□□□□ 0.33
CCDC144NL-AS1-210ENST00000577968 ZBTB12Q9Y330 459 aaPredicted RBP16.9■□□□□ 0.3
CCDC144NL-AS1-210ENST00000577968 FBLN2P98095 1184 aa16.67■□□□□ 0.26
CCDC144NL-AS1-210ENST00000577968 RBM42Q9BTD8 480 aaKnown RBP16.67■□□□□ 0.26
CCDC144NL-AS1-210ENST00000577968 OSCARQ8IYS5 282 aa16.52■□□□□ 0.24
CCDC144NL-AS1-210ENST00000577968 MKRN4PQ13434 485 aaPredicted RBP16.5■□□□□ 0.23
CCDC144NL-AS1-210ENST00000577968 SPDYE2BA6NHP3 402 aa16.38■□□□□ 0.21
CCDC144NL-AS1-210ENST00000577968 SPDYE6P0CI01 402 aa16.38■□□□□ 0.21
CCDC144NL-AS1-210ENST00000577968 SPDYE2Q495Y8 402 aa16.38■□□□□ 0.21
CCDC144NL-AS1-210ENST00000577968 AKT1S1Q96B36 256 aa16.36■□□□□ 0.21
CCDC144NL-AS1-210ENST00000577968 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
CCDC144NL-AS1-210ENST00000577968 SSUH2Q9Y2M2 353 aa16.19■□□□□ 0.18
CCDC144NL-AS1-210ENST00000577968 REM2Q8IYK8 340 aaPredicted RBP16.16■□□□□ 0.18
CCDC144NL-AS1-210ENST00000577968 SPDYE4A6NLX3 237 aa16.04■□□□□ 0.16
CCDC144NL-AS1-210ENST00000577968 CHRDL2Q6WN34 429 aa16.03■□□□□ 0.16
CCDC144NL-AS1-210ENST00000577968 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
CCDC144NL-AS1-210ENST00000577968 PITPNM1O00562 1244 aa15.97■□□□□ 0.15
CCDC144NL-AS1-210ENST00000577968 SPDYE1Q8NFV5 336 aaPredicted RBP15.97■□□□□ 0.15
CCDC144NL-AS1-210ENST00000577968 POTEHQ6S545 545 aa15.86■□□□□ 0.13
CCDC144NL-AS1-210ENST00000577968 CLEC11AQ9Y240 323 aa15.85■□□□□ 0.13
CCDC144NL-AS1-210ENST00000577968 FXR2P51116 673 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCDC144NL-AS1-210ENST00000577968 STAG3Q9UJ98 1225 aa15.75■□□□□ 0.11
CCDC144NL-AS1-210ENST00000577968 FKBP8Q14318 412 aa15.74■□□□□ 0.11
CCDC144NL-AS1-210ENST00000577968 PROM2Q8N271 834 aa15.74■□□□□ 0.11
CCDC144NL-AS1-210ENST00000577968 PIP4P2Q8N4L2 257 aa15.74■□□□□ 0.11
CCDC144NL-AS1-210ENST00000577968 PRR29P0C7W0 189 aa15.7■□□□□ 0.1
CCDC144NL-AS1-210ENST00000577968 PRKAR2AP13861 404 aaKnown RBP15.57■□□□□ 0.08
CCDC144NL-AS1-210ENST00000577968 CHADLQ6NUI6 762 aa15.46■□□□□ 0.07
CCDC144NL-AS1-210ENST00000577968 CREBZFQ9NS37 354 aa15.39■□□□□ 0.05
CCDC144NL-AS1-210ENST00000577968 FBXO3Q9UK99 471 aa15.36■□□□□ 0.05
CCDC144NL-AS1-210ENST00000577968 FARP1Q9Y4F1 1045 aaPredicted RBP15.34■□□□□ 0.05
CCDC144NL-AS1-210ENST00000577968 HAX1O00165 279 aa15.33■□□□□ 0.04
CCDC144NL-AS1-210ENST00000577968 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
CCDC144NL-AS1-210ENST00000577968 MIER1Q8N108 512 aa15.24■□□□□ 0.03
CCDC144NL-AS1-210ENST00000577968 C19orf67A6NJJ6 358 aa15.23■□□□□ 0.03
CCDC144NL-AS1-210ENST00000577968 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
CCDC144NL-AS1-210ENST00000577968 PLCD3Q8N3E9 789 aa15.2■□□□□ 0.02
CCDC144NL-AS1-210ENST00000577968 MNX1P50219 401 aaPredicted RBP15.19■□□□□ 0.02
CCDC144NL-AS1-210ENST00000577968 SP7Q8TDD2 431 aaPredicted RBP15.13■□□□□ 0.01
CCDC144NL-AS1-210ENST00000577968 ZBTB47Q9UFB7 747 aaPredicted RBP15.13■□□□□ 0.01
CCDC144NL-AS1-210ENST00000577968 CD44P16070 742 aaKnown RBP15.12■□□□□ 0.01
CCDC144NL-AS1-210ENST00000577968 VASPP50552 380 aaPredicted RBP15.09■□□□□ 0.01
CCDC144NL-AS1-210ENST00000577968 EVX2Q03828 476 aa15.09■□□□□ 0.01
CCDC144NL-AS1-210ENST00000577968 PAK3O75914 559 aaPredicted RBP15.05■□□□□ -0
CCDC144NL-AS1-210ENST00000577968 ZRANB1Q9UGI0 708 aa14.98□□□□□ -0.01
CCDC144NL-AS1-210ENST00000577968 CLCN6P51797 869 aa14.95□□□□□ -0.02
CCDC144NL-AS1-210ENST00000577968 ZNF579Q8NAF0 562 aaKnown RBP14.93□□□□□ -0.02
CCDC144NL-AS1-210ENST00000577968 KLHL34Q8N239 644 aa14.91□□□□□ -0.02
CCDC144NL-AS1-210ENST00000577968 NUBP1P53384 320 aa14.87□□□□□ -0.03
CCDC144NL-AS1-210ENST00000577968 GABBR2O75899 941 aa14.86□□□□□ -0.03
CCDC144NL-AS1-210ENST00000577968 RASEFQ8IZ41 740 aa14.86□□□□□ -0.03
CCDC144NL-AS1-210ENST00000577968 TSPYL2Q9H2G4 693 aaPredicted RBP14.86□□□□□ -0.03
CCDC144NL-AS1-210ENST00000577968 IFNLR1Q8IU57 520 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms