RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 NISCHQ9Y2I1 1504 aa35.05■■■■□ 3.2
LINC01006-202ENST00000418309 CCDC180Q9P1Z9 1646 aa31.36■■■□□ 2.61
LINC01006-202ENST00000418309 ABCC9O60706 1549 aa31.34■■■□□ 2.61
LINC01006-202ENST00000418309 RB1CC1Q8TDY2 1594 aa29.85■■■□□ 2.37
LINC01006-202ENST00000418309 DCAF8L2P0C7V8 631 aa29.72■■■□□ 2.35
LINC01006-202ENST00000418309 NACADO15069 1562 aa29.65■■■□□ 2.34
LINC01006-202ENST00000418309 DNAJC5BQ9UF47 199 aa29.29■■■□□ 2.28
LINC01006-202ENST00000418309 PABPN1Q86U42 306 aaKnown RBP eCLIP29.24■■■□□ 2.27
LINC01006-202ENST00000418309 AEBP2Q6ZN18 517 aaPredicted RBP29.23■■■□□ 2.27
LINC01006-202ENST00000418309 MYO15BQ96JP2 1530 aa29.23■■■□□ 2.27
LINC01006-202ENST00000418309 UNC13AQ9UPW8 1703 aa29.15■■■□□ 2.26
LINC01006-202ENST00000418309 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
LINC01006-202ENST00000418309 BICRAQ9NZM4 1560 aa28.92■■■□□ 2.22
LINC01006-202ENST00000418309 DCAF1Q9Y4B6 1507 aa28.91■■■□□ 2.22
LINC01006-202ENST00000418309 SCRIBQ14160 1630 aa28.65■■■□□ 2.18
LINC01006-202ENST00000418309 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
LINC01006-202ENST00000418309 CC2D2AQ9P2K1 1620 aa28.28■■■□□ 2.12
LINC01006-202ENST00000418309 EIF4G1Q04637 1599 aaKnown RBP28.24■■■□□ 2.11
LINC01006-202ENST00000418309 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
LINC01006-202ENST00000418309 CHIC1Q5VXU3 224 aa27.78■■■□□ 2.04
LINC01006-202ENST00000418309 NCAPD3P42695 1498 aa27.38■■□□□ 1.97
LINC01006-202ENST00000418309 ATAD2BQ9ULI0 1458 aa27.32■■□□□ 1.96
LINC01006-202ENST00000418309 SMARCA4P51532 1647 aa27.31■■□□□ 1.96
LINC01006-202ENST00000418309 SMARCA2P51531 1590 aa27.26■■□□□ 1.95
LINC01006-202ENST00000418309 BAZ1AQ9NRL2 1556 aaPredicted RBP27.2■■□□□ 1.94
LINC01006-202ENST00000418309 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
LINC01006-202ENST00000418309 BAZ1BQ9UIG0 1483 aaKnown RBP27.08■■□□□ 1.93
LINC01006-202ENST00000418309 ERCC6Q03468 1493 aa27.07■■□□□ 1.92
LINC01006-202ENST00000418309 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.92
LINC01006-202ENST00000418309 PEG3Q9GZU2 1588 aa27■■□□□ 1.91
LINC01006-202ENST00000418309 NESP48681 1621 aa26.94■■□□□ 1.9
LINC01006-202ENST00000418309 CUX2O14529 1486 aa26.92■■□□□ 1.9
LINC01006-202ENST00000418309 DNAJC5Q9H3Z4 198 aa26.82■■□□□ 1.88
LINC01006-202ENST00000418309 LAMC3Q9Y6N6 1575 aa26.74■■□□□ 1.87
LINC01006-202ENST00000418309 WIZO95785 1651 aa26.72■■□□□ 1.87
LINC01006-202ENST00000418309 PDS5BQ9NTI5 1447 aa26.63■■□□□ 1.85
LINC01006-202ENST00000418309 CADPSQ9ULU8 1353 aa26.58■■□□□ 1.85
LINC01006-202ENST00000418309 THOC2Q8NI27 1593 aaKnown RBP26.58■■□□□ 1.85
LINC01006-202ENST00000418309 KIF21AQ7Z4S6 1674 aa26.58■■□□□ 1.85
LINC01006-202ENST00000418309 RSF1Q96T23 1441 aaPredicted RBP26.5■■□□□ 1.83
LINC01006-202ENST00000418309 MRC2Q9UBG0 1479 aa26.36■■□□□ 1.81
LINC01006-202ENST00000418309 TOP2AP11388 1531 aaKnown RBP26.36■■□□□ 1.81
LINC01006-202ENST00000418309 CEP164Q9UPV0 1460 aa26.3■■□□□ 1.8
LINC01006-202ENST00000418309 FANCD2Q9BXW9 1451 aa26.28■■□□□ 1.8
LINC01006-202ENST00000418309 CFTRP13569 1480 aa26.27■■□□□ 1.8
LINC01006-202ENST00000418309 WDR62O43379 1518 aa26.26■■□□□ 1.79
LINC01006-202ENST00000418309 CCDC88BA6NC98 1476 aa26.09■■□□□ 1.77
LINC01006-202ENST00000418309 URB2Q14146 1524 aaKnown RBP26.03■■□□□ 1.76
LINC01006-202ENST00000418309 PRDM2Q13029 1718 aa26.01■■□□□ 1.75
LINC01006-202ENST00000418309 OSCARQ8IYS5 282 aa25.8■■□□□ 1.72
LINC01006-202ENST00000418309 TOPBP1Q92547 1522 aa25.78■■□□□ 1.72
LINC01006-202ENST00000418309 TRIM41Q8WV44 630 aa25.78■■□□□ 1.72
LINC01006-202ENST00000418309 IFT140Q96RY7 1462 aa25.75■■□□□ 1.71
LINC01006-202ENST00000418309 ABCC8Q09428 1581 aa25.74■■□□□ 1.71
LINC01006-202ENST00000418309 ZNF608Q9ULD9 1512 aaPredicted RBP25.7■■□□□ 1.7
LINC01006-202ENST00000418309 DNMBPQ6XZF7 1577 aa25.69■■□□□ 1.7
LINC01006-202ENST00000418309 SUPT5HO00267 1087 aaKnown RBP25.56■■□□□ 1.68
LINC01006-202ENST00000418309 EIF4G3O43432 1585 aaKnown RBP25.55■■□□□ 1.68
LINC01006-202ENST00000418309 AQRO60306 1485 aaKnown RBP eCLIP25.52■■□□□ 1.68
LINC01006-202ENST00000418309 POLA1P09884 1462 aaPredicted RBP25.52■■□□□ 1.68
LINC01006-202ENST00000418309 TARBP1Q13395 1621 aaKnown RBP25.52■■□□□ 1.68
LINC01006-202ENST00000418309 RAD54L2Q9Y4B4 1467 aa25.46■■□□□ 1.67
LINC01006-202ENST00000418309 SOGA1O94964 1423 aa25.46■■□□□ 1.67
LINC01006-202ENST00000418309 FBLN2P98095 1184 aa25.42■■□□□ 1.66
LINC01006-202ENST00000418309 TDRD9Q8NDG6 1382 aaKnown RBP25.4■■□□□ 1.66
LINC01006-202ENST00000418309 FGD5Q6ZNL6 1462 aa25.4■■□□□ 1.66
LINC01006-202ENST00000418309 CUX1P39880 1505 aa25.37■■□□□ 1.65
LINC01006-202ENST00000418309 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
LINC01006-202ENST00000418309 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
LINC01006-202ENST00000418309 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
LINC01006-202ENST00000418309 CHD1O14646 1710 aa25.36■■□□□ 1.65
LINC01006-202ENST00000418309 ARHGEF11O15085 1522 aa25.31■■□□□ 1.64
LINC01006-202ENST00000418309 WDR97A6NE52 1622 aa25.25■■□□□ 1.63
LINC01006-202ENST00000418309 SNAPC4Q5SXM2 1469 aa25.24■■□□□ 1.63
LINC01006-202ENST00000418309 CHMP7Q8WUX9 453 aaPredicted RBP25.22■■□□□ 1.63
LINC01006-202ENST00000418309 CYB5RLQ6IPT4 315 aa25.21■■□□□ 1.63
LINC01006-202ENST00000418309 GRIN2BQ13224 1484 aa25.19■■□□□ 1.62
LINC01006-202ENST00000418309 MAGI1Q96QZ7 1491 aaPredicted RBP25.16■■□□□ 1.62
LINC01006-202ENST00000418309 GAPVD1Q14C86 1478 aa25.13■■□□□ 1.61
LINC01006-202ENST00000418309 ABCA10Q8WWZ4 1543 aa25.09■■□□□ 1.61
LINC01006-202ENST00000418309 PBRM1Q86U86 1689 aa25.09■■□□□ 1.61
LINC01006-202ENST00000418309 SYNJ2O15056 1496 aa25.09■■□□□ 1.61
LINC01006-202ENST00000418309 SYNJ1O43426 1573 aa25.08■■□□□ 1.61
LINC01006-202ENST00000418309 WRNQ14191 1432 aaPredicted RBP eCLIP25.06■■□□□ 1.6
LINC01006-202ENST00000418309 ARAP1Q96P48 1450 aa25.06■■□□□ 1.6
LINC01006-202ENST00000418309 CLASP1Q7Z460 1538 aa25.02■■□□□ 1.6
LINC01006-202ENST00000418309 ABCA5Q8WWZ7 1642 aa25.02■■□□□ 1.6
LINC01006-202ENST00000418309 TOP2BQ02880 1626 aa24.99■■□□□ 1.59
LINC01006-202ENST00000418309 BIVM-ERCC5R4GMW8 1640 aa24.98■■□□□ 1.59
LINC01006-202ENST00000418309 TRHP20396 242 aaPredicted RBP24.93■■□□□ 1.58
LINC01006-202ENST00000418309 SENP3Q9H4L4 574 aaPredicted RBP24.9■■□□□ 1.58
LINC01006-202ENST00000418309 GRIN2AQ12879 1464 aa24.85■■□□□ 1.57
LINC01006-202ENST00000418309 ADAMTS12P58397 1594 aa24.83■■□□□ 1.57
LINC01006-202ENST00000418309 FHAD1B1AJZ9 1412 aa24.81■■□□□ 1.56
LINC01006-202ENST00000418309 ERICH3Q5RHP9 1530 aa24.78■■□□□ 1.56
LINC01006-202ENST00000418309 NUP160Q12769 1436 aa24.75■■□□□ 1.55
LINC01006-202ENST00000418309 CEP170Q5SW79 1584 aa24.75■■□□□ 1.55
LINC01006-202ENST00000418309 ERCC6L2Q5T890 1561 aa24.68■■□□□ 1.54
LINC01006-202ENST00000418309 SHROOM2Q13796 1616 aa24.61■■□□□ 1.53
LINC01006-202ENST00000418309 PHF23Q9BUL5 403 aaPredicted RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms