RNA–Protein interactions for RNA: ENST00000333725.9

TCF12-202, Transcript of transcription factor 12, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TCF12, Length 4,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-202ENST00000333725 NISCHQ9Y2I1 1504 aa22.17■■□□□ 1.14
TCF12-202ENST00000333725 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
TCF12-202ENST00000333725 SUPT5HO00267 1087 aaKnown RBP20.67■□□□□ 0.9
TCF12-202ENST00000333725 SHROOM4Q9ULL8 1493 aa20.66■□□□□ 0.9
TCF12-202ENST00000333725 EHMT2Q96KQ7 1210 aa19.77■□□□□ 0.75
TCF12-202ENST00000333725 FAM9AQ8IZU1 332 aaPredicted RBP19.42■□□□□ 0.7
TCF12-202ENST00000333725 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
TCF12-202ENST00000333725 APLP2Q06481 763 aa19.14■□□□□ 0.65
TCF12-202ENST00000333725 ABCC9O60706 1549 aa19.11■□□□□ 0.65
TCF12-202ENST00000333725 RANGAP1P46060 587 aaPredicted RBP19.01■□□□□ 0.63
TCF12-202ENST00000333725 TTBK1Q5TCY1 1321 aaPredicted RBP19.01■□□□□ 0.63
TCF12-202ENST00000333725 UBTFP17480 764 aaKnown RBP18.83■□□□□ 0.61
TCF12-202ENST00000333725 PABPN1Q86U42 306 aaKnown RBP eCLIP18.81■□□□□ 0.6
TCF12-202ENST00000333725 PCGF6Q9BYE7 350 aa18.81■□□□□ 0.6
TCF12-202ENST00000333725 ATP1B4Q9UN42 357 aaPredicted RBP18.74■□□□□ 0.59
TCF12-202ENST00000333725 CHIC1Q5VXU3 224 aa18.59■□□□□ 0.57
TCF12-202ENST00000333725 PPARGC1BQ86YN6 1023 aaKnown RBP18.48■□□□□ 0.55
TCF12-202ENST00000333725 LOC105371045A0A1W2PR82 267 aa18.45■□□□□ 0.54
TCF12-202ENST00000333725 CCER1Q8TC90 406 aaPredicted RBP18.4■□□□□ 0.54
TCF12-202ENST00000333725 ZCCHC6Q5VYS8 1495 aaKnown RBP18.38■□□□□ 0.53
TCF12-202ENST00000333725 CCDC180Q9P1Z9 1646 aa18.35■□□□□ 0.53
TCF12-202ENST00000333725 SCRIBQ14160 1630 aa18.26■□□□□ 0.51
TCF12-202ENST00000333725 ZEB1P37275 1124 aaPredicted RBP18.23■□□□□ 0.51
TCF12-202ENST00000333725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.19■□□□□ 0.5
TCF12-202ENST00000333725 HNRNPUL2Q1KMD3 747 aaKnown RBP18.19■□□□□ 0.5
TCF12-202ENST00000333725 TRIM26Q12899 539 aaPredicted RBP18.16■□□□□ 0.5
TCF12-202ENST00000333725 ITGAEP38570 1179 aa18.12■□□□□ 0.49
TCF12-202ENST00000333725 MYT1LQ9UL68 1186 aa17.94■□□□□ 0.46
TCF12-202ENST00000333725 PELP1Q8IZL8 1130 aaKnown RBP17.91■□□□□ 0.46
TCF12-202ENST00000333725 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
TCF12-202ENST00000333725 FBLN2P98095 1184 aa17.86■□□□□ 0.45
TCF12-202ENST00000333725 CSRNP3Q8WYN3 585 aa17.8■□□□□ 0.44
TCF12-202ENST00000333725 NACADO15069 1562 aa17.78■□□□□ 0.44
TCF12-202ENST00000333725 CENPBP07199 599 aaPredicted RBP17.78■□□□□ 0.44
TCF12-202ENST00000333725 FAM50AQ14320 339 aaKnown RBP17.75■□□□□ 0.43
TCF12-202ENST00000333725 HRCP23327 699 aa17.75■□□□□ 0.43
TCF12-202ENST00000333725 P3H3Q8IVL6 736 aa17.7■□□□□ 0.42
TCF12-202ENST00000333725 YTHDC1Q96MU7 727 aaKnown RBP17.69■□□□□ 0.42
TCF12-202ENST00000333725 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
TCF12-202ENST00000333725 POLR3GLQ9BT43 218 aa17.62■□□□□ 0.41
TCF12-202ENST00000333725 ARID3CA6NKF2 412 aa17.6■□□□□ 0.41
TCF12-202ENST00000333725 DCAF1Q9Y4B6 1507 aa17.56■□□□□ 0.4
TCF12-202ENST00000333725 TRIM52Q96A61 297 aa17.54■□□□□ 0.4
TCF12-202ENST00000333725 CNGB1Q14028 1251 aaPredicted RBP17.46■□□□□ 0.39
TCF12-202ENST00000333725 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
TCF12-202ENST00000333725 BAZ1BQ9UIG0 1483 aaKnown RBP17.45■□□□□ 0.38
TCF12-202ENST00000333725 NEUROD1Q13562 356 aa17.44■□□□□ 0.38
TCF12-202ENST00000333725 NEFLP07196 543 aa17.42■□□□□ 0.38
TCF12-202ENST00000333725 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
TCF12-202ENST00000333725 ZNF777Q9ULD5 760 aaPredicted RBP17.35■□□□□ 0.37
TCF12-202ENST00000333725 CDK11AQ9UQ88 783 aaPredicted RBP17.32■□□□□ 0.36
TCF12-202ENST00000333725 WRNQ14191 1432 aaPredicted RBP eCLIP17.29■□□□□ 0.36
TCF12-202ENST00000333725 ZNF326Q5BKZ1 582 aaKnown RBP17.28■□□□□ 0.36
TCF12-202ENST00000333725 SLC4A1APQ9BWU0 796 aaKnown RBP17.28■□□□□ 0.36
TCF12-202ENST00000333725 DIEXFQ68CQ4 756 aaKnown RBP17.26■□□□□ 0.35
TCF12-202ENST00000333725 CHMP7Q8WUX9 453 aaPredicted RBP17.26■□□□□ 0.35
TCF12-202ENST00000333725 MROH2BQ7Z745 1585 aa17.2■□□□□ 0.34
TCF12-202ENST00000333725 MYO15BQ96JP2 1530 aa17.2■□□□□ 0.34
TCF12-202ENST00000333725 CLIP1P30622 1438 aa17.18■□□□□ 0.34
TCF12-202ENST00000333725 EEA1Q15075 1411 aa17.15■□□□□ 0.34
TCF12-202ENST00000333725 NPM1P06748 294 aaKnown RBP eCLIP17.13■□□□□ 0.33
TCF12-202ENST00000333725 ERICH6Q7L0X2 663 aa17.13■□□□□ 0.33
TCF12-202ENST00000333725 KIF27Q86VH2 1401 aa17.1■□□□□ 0.33
TCF12-202ENST00000333725 GOLGA3Q08378 1498 aa17.1■□□□□ 0.33
TCF12-202ENST00000333725 CHIC2Q9UKJ5 165 aa17.08■□□□□ 0.32
TCF12-202ENST00000333725 MTUS2Q5JR59 1369 aa17.07■□□□□ 0.32
TCF12-202ENST00000333725 ERCC6Q03468 1493 aa17.07■□□□□ 0.32
TCF12-202ENST00000333725 CEP162Q5TB80 1403 aa17.06■□□□□ 0.32
TCF12-202ENST00000333725 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
TCF12-202ENST00000333725 ZNF316A6NFI3 1004 aaPredicted RBP17.02■□□□□ 0.32
TCF12-202ENST00000333725 SMARCA2P51531 1590 aa17■□□□□ 0.31
TCF12-202ENST00000333725 CEP164Q9UPV0 1460 aa16.98■□□□□ 0.31
TCF12-202ENST00000333725 ANP32CO43423 234 aa16.97■□□□□ 0.31
TCF12-202ENST00000333725 TNIKQ9UKE5 1360 aa16.96■□□□□ 0.31
TCF12-202ENST00000333725 BCANQ96GW7 911 aa16.96■□□□□ 0.31
TCF12-202ENST00000333725 SOGA1O94964 1423 aa16.96■□□□□ 0.3
TCF12-202ENST00000333725 WIZO95785 1651 aa16.94■□□□□ 0.3
TCF12-202ENST00000333725 TSPY4P0CV99 314 aa16.94■□□□□ 0.3
TCF12-202ENST00000333725 TSPY10P0CW01 314 aa16.94■□□□□ 0.3
TCF12-202ENST00000333725 CUX2O14529 1486 aa16.92■□□□□ 0.3
TCF12-202ENST00000333725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.92■□□□□ 0.31e-7■■□□□ 12.6
TCF12-202ENST00000333725 TONSLQ96HA7 1378 aa16.92■□□□□ 0.3
TCF12-202ENST00000333725 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
TCF12-202ENST00000333725 ESF1Q9H501 851 aaKnown RBP16.92■□□□□ 0.3
TCF12-202ENST00000333725 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
TCF12-202ENST00000333725 CHGAP10645 457 aaKnown RBP16.91■□□□□ 0.3
TCF12-202ENST00000333725 PLEKHD1A6NEE1 506 aa16.89■□□□□ 0.29
TCF12-202ENST00000333725 CARMIL1Q5VZK9 1371 aa16.87■□□□□ 0.29
TCF12-202ENST00000333725 TOP2AP11388 1531 aaKnown RBP16.87■□□□□ 0.29
TCF12-202ENST00000333725 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
TCF12-202ENST00000333725 RRP7BPQ9NSQ0 103 aa16.85■□□□□ 0.29
TCF12-202ENST00000333725 ATAD2BQ9ULI0 1458 aa16.85■□□□□ 0.29
TCF12-202ENST00000333725 PDS5BQ9NTI5 1447 aa16.83■□□□□ 0.28
TCF12-202ENST00000333725 STAG3Q9UJ98 1225 aa16.82■□□□□ 0.28
TCF12-202ENST00000333725 SMARCA4P51532 1647 aa16.79■□□□□ 0.28
TCF12-202ENST00000333725 CADPSQ9ULU8 1353 aa16.79■□□□□ 0.28
TCF12-202ENST00000333725 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.28
TCF12-202ENST00000333725 CFDP1Q9UEE9 299 aaPredicted RBP16.76■□□□□ 0.27
TCF12-202ENST00000333725 EIF4G1Q04637 1599 aaKnown RBP16.75■□□□□ 0.27
TCF12-202ENST00000333725 KDM2AQ9Y2K7 1162 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms