RNA–Protein interactions for RNA: ENST00000451533.5

VSNL1-204, Transcript of visinin like 1, humanhuman

TSL 4

Gene VSNL1, Length 562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-204ENST00000451533 AEBP2Q6ZN18 517 aaPredicted RBP29.47■■■□□ 2.31
VSNL1-204ENST00000451533 CHIC1Q5VXU3 224 aa28■■■□□ 2.07
VSNL1-204ENST00000451533 SENP3Q9H4L4 574 aaPredicted RBP25.19■■□□□ 1.62
VSNL1-204ENST00000451533 PHF23Q9BUL5 403 aaPredicted RBP24.86■■□□□ 1.57
VSNL1-204ENST00000451533 FOXD1Q16676 465 aa23.46■■□□□ 1.35
VSNL1-204ENST00000451533 PLPPR3Q6T4P5 718 aa22.39■■□□□ 1.17
VSNL1-204ENST00000451533 MSH5O43196 834 aa21.99■■□□□ 1.11
VSNL1-204ENST00000451533 PIAS4Q8N2W9 510 aaPredicted RBP21.95■■□□□ 1.1
VSNL1-204ENST00000451533 PPP6R1Q9UPN7 881 aa21.91■■□□□ 1.1
VSNL1-204ENST00000451533 ADRA2BP18089 450 aa21.87■■□□□ 1.09
VSNL1-204ENST00000451533 POTEDQ86YR6 584 aa21.47■■□□□ 1.03
VSNL1-204ENST00000451533 MAPK8IP2Q13387 824 aaPredicted RBP20.08■□□□□ 0.81
VSNL1-204ENST00000451533 SCAF1Q9H7N4 1312 aaKnown RBP20.04■□□□□ 0.8
VSNL1-204ENST00000451533 DMRT2Q9Y5R5 561 aa19.96■□□□□ 0.79
VSNL1-204ENST00000451533 PPP4R3CPQ6ZMV5 832 aa19.62■□□□□ 0.73
VSNL1-204ENST00000451533 NISCHQ9Y2I1 1504 aa19.56■□□□□ 0.72
VSNL1-204ENST00000451533 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
VSNL1-204ENST00000451533 DCAF8L1A6NGE4 600 aa19.22■□□□□ 0.67
VSNL1-204ENST00000451533 HOXD11P31277 338 aaPredicted RBP19.2■□□□□ 0.66
VSNL1-204ENST00000451533 RNF216Q9NWF9 866 aaPredicted RBP19.07■□□□□ 0.64
VSNL1-204ENST00000451533 CACNB1Q02641 598 aaPredicted RBP18.9■□□□□ 0.62
VSNL1-204ENST00000451533 NCBP3Q53F19 620 aaKnown RBP18.89■□□□□ 0.61
VSNL1-204ENST00000451533 RNF39Q9H2S5 420 aa18.73■□□□□ 0.59
VSNL1-204ENST00000451533 NPM3O75607 178 aaKnown RBP18.58■□□□□ 0.56
VSNL1-204ENST00000451533 DNAJC5BQ9UF47 199 aa18.53■□□□□ 0.56
VSNL1-204ENST00000451533 C1QBPQ07021 282 aaKnown RBP18.48■□□□□ 0.55
VSNL1-204ENST00000451533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.534e-12■■■□□ 18.6
VSNL1-204ENST00000451533 KCNA4P22459 653 aa18.21■□□□□ 0.51
VSNL1-204ENST00000451533 U3KPZ7 1027 aaPredicted RBP17.92■□□□□ 0.46
VSNL1-204ENST00000451533 SLC4A2P04920 1241 aa17.72■□□□□ 0.43
VSNL1-204ENST00000451533 CAPN15O75808 1086 aa17.69■□□□□ 0.42
VSNL1-204ENST00000451533 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
VSNL1-204ENST00000451533 DSG3P32926 999 aa17.55■□□□□ 0.4
VSNL1-204ENST00000451533 APLP2Q06481 763 aa17.48■□□□□ 0.39
VSNL1-204ENST00000451533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
VSNL1-204ENST00000451533 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
VSNL1-204ENST00000451533 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
VSNL1-204ENST00000451533 ZNF219Q9P2Y4 722 aaPredicted RBP17.36■□□□□ 0.37
VSNL1-204ENST00000451533 SAMD1Q6SPF0 538 aaPredicted RBP17.34■□□□□ 0.37
VSNL1-204ENST00000451533 ABCB7O75027 752 aa17.26■□□□□ 0.35
VSNL1-204ENST00000451533 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
VSNL1-204ENST00000451533 MYCNP04198 464 aaPredicted RBP17.2■□□□□ 0.34
VSNL1-204ENST00000451533 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
VSNL1-204ENST00000451533 CCDC180Q9P1Z9 1646 aa16.99■□□□□ 0.31
VSNL1-204ENST00000451533 POLA2Q14181 598 aa16.91■□□□□ 0.3
VSNL1-204ENST00000451533 POTEHQ6S545 545 aa16.83■□□□□ 0.28
VSNL1-204ENST00000451533 RBM42Q9BTD8 480 aaKnown RBP16.78■□□□□ 0.28
VSNL1-204ENST00000451533 ATF5Q9Y2D1 282 aaPredicted RBP16.77■□□□□ 0.28
VSNL1-204ENST00000451533 ZBTB22O15209 634 aa16.7■□□□□ 0.26
VSNL1-204ENST00000451533 ZBTB12Q9Y330 459 aaPredicted RBP16.58■□□□□ 0.24
VSNL1-204ENST00000451533 ZCCHC6Q5VYS8 1495 aaKnown RBP16.58■□□□□ 0.24
VSNL1-204ENST00000451533 ATXN8OSP0DMR3 200 aa16.47■□□□□ 0.23
VSNL1-204ENST00000451533 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
VSNL1-204ENST00000451533 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
VSNL1-204ENST00000451533 AKT1S1Q96B36 256 aa16.37■□□□□ 0.21
VSNL1-204ENST00000451533 DCAF1Q9Y4B6 1507 aa16.3■□□□□ 0.2
VSNL1-204ENST00000451533 REM2Q8IYK8 340 aaPredicted RBP16.22■□□□□ 0.19
VSNL1-204ENST00000451533 SHROOM4Q9ULL8 1493 aa16.19■□□□□ 0.18
VSNL1-204ENST00000451533 FBLN2P98095 1184 aa16.18■□□□□ 0.18
VSNL1-204ENST00000451533 SPDYE2BA6NHP3 402 aa16.05■□□□□ 0.16
VSNL1-204ENST00000451533 SPDYE6P0CI01 402 aa16.05■□□□□ 0.16
VSNL1-204ENST00000451533 SPDYE2Q495Y8 402 aa16.05■□□□□ 0.16
VSNL1-204ENST00000451533 PITPNM1O00562 1244 aa16.03■□□□□ 0.16
VSNL1-204ENST00000451533 MKRN4PQ13434 485 aaPredicted RBP16■□□□□ 0.15
VSNL1-204ENST00000451533 PIP4P2Q8N4L2 257 aa15.99■□□□□ 0.15
VSNL1-204ENST00000451533 CSRNP3Q8WYN3 585 aa15.95■□□□□ 0.14
VSNL1-204ENST00000451533 SUPT5HO00267 1087 aaKnown RBP15.91■□□□□ 0.14
VSNL1-204ENST00000451533 MYO15BQ96JP2 1530 aa15.9■□□□□ 0.14
VSNL1-204ENST00000451533 FXR2P51116 673 aaKnown RBP eCLIP15.89■□□□□ 0.13
VSNL1-204ENST00000451533 ZNF692Q9BU19 519 aaPredicted RBP15.87■□□□□ 0.13
VSNL1-204ENST00000451533 SSUH2Q9Y2M2 353 aa15.8■□□□□ 0.12
VSNL1-204ENST00000451533 DCAF8L2P0C7V8 631 aa15.79■□□□□ 0.12
VSNL1-204ENST00000451533 SPDYE1Q8NFV5 336 aaPredicted RBP15.79■□□□□ 0.12
VSNL1-204ENST00000451533 CLEC11AQ9Y240 323 aa15.79■□□□□ 0.12
VSNL1-204ENST00000451533 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
VSNL1-204ENST00000451533 SP7Q8TDD2 431 aaPredicted RBP15.77■□□□□ 0.12
VSNL1-204ENST00000451533 HAX1O00165 279 aa15.75■□□□□ 0.11
VSNL1-204ENST00000451533 ABCC9O60706 1549 aa15.7■□□□□ 0.1
VSNL1-204ENST00000451533 PRKAR2AP13861 404 aaKnown RBP15.65■□□□□ 0.1
VSNL1-204ENST00000451533 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
VSNL1-204ENST00000451533 NACADO15069 1562 aa15.6■□□□□ 0.09
VSNL1-204ENST00000451533 PRR29P0C7W0 189 aa15.51■□□□□ 0.07
VSNL1-204ENST00000451533 SCRIBQ14160 1630 aa15.5■□□□□ 0.07
VSNL1-204ENST00000451533 EVX2Q03828 476 aa15.5■□□□□ 0.07
VSNL1-204ENST00000451533 CHADLQ6NUI6 762 aa15.46■□□□□ 0.07
VSNL1-204ENST00000451533 RB1CC1Q8TDY2 1594 aa15.39■□□□□ 0.05
VSNL1-204ENST00000451533 C19orf67A6NJJ6 358 aa15.38■□□□□ 0.05
VSNL1-204ENST00000451533 RSF1Q96T23 1441 aaPredicted RBP15.33■□□□□ 0.04
VSNL1-204ENST00000451533 SPDYE4A6NLX3 237 aa15.28■□□□□ 0.04
VSNL1-204ENST00000451533 FARP1Q9Y4F1 1045 aaPredicted RBP15.23■□□□□ 0.03
VSNL1-204ENST00000451533 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
VSNL1-204ENST00000451533 GABBR2O75899 941 aa15.17■□□□□ 0.02
VSNL1-204ENST00000451533 CD44P16070 742 aaKnown RBP15.16■□□□□ 0.02
VSNL1-204ENST00000451533 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
VSNL1-204ENST00000451533 HRCP23327 699 aa15.15■□□□□ 0.02
VSNL1-204ENST00000451533 CREBZFQ9NS37 354 aa15.08■□□□□ 0
VSNL1-204ENST00000451533 MROH2BQ7Z745 1585 aa15.05■□□□□ -0
VSNL1-204ENST00000451533 TRIM41Q8WV44 630 aa15.03■□□□□ -0
VSNL1-204ENST00000451533 WIZO95785 1651 aa15.02□□□□□ -0.01
VSNL1-204ENST00000451533 CECR2Q9BXF3 1484 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 396.5 ms