RNA–Protein interactions for RNA: ENST00000560190.5

TCF12-215, Transcript of transcription factor 12, humanhuman

TSL 1 (best)

Gene TCF12, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-215ENST00000560190 NISCHQ9Y2I1 1504 aa47.84■■■■■ 5.25
TCF12-215ENST00000560190 ABCC9O60706 1549 aa43.11■■■■■ 4.49
TCF12-215ENST00000560190 CCDC180Q9P1Z9 1646 aa43.04■■■■■ 4.48
TCF12-215ENST00000560190 RB1CC1Q8TDY2 1594 aa40.97■■■■■ 4.15
TCF12-215ENST00000560190 NACADO15069 1562 aa40.65■■■■■ 4.1
TCF12-215ENST00000560190 DNAJC5BQ9UF47 199 aa40.49■■■■■ 4.07
TCF12-215ENST00000560190 DCAF8L2P0C7V8 631 aa40.26■■■■■ 4.04
TCF12-215ENST00000560190 UNC13AQ9UPW8 1703 aa40.16■■■■■ 4.02
TCF12-215ENST00000560190 PABPN1Q86U42 306 aaKnown RBP eCLIP40.05■■■■■ 4
TCF12-215ENST00000560190 MYO15BQ96JP2 1530 aa40.05■■■■■ 4
TCF12-215ENST00000560190 BICRAQ9NZM4 1560 aa39.84■■■■□ 3.97
TCF12-215ENST00000560190 ZCCHC6Q5VYS8 1495 aaKnown RBP39.67■■■■□ 3.94
TCF12-215ENST00000560190 DCAF1Q9Y4B6 1507 aa39.5■■■■□ 3.91
TCF12-215ENST00000560190 SHROOM4Q9ULL8 1493 aa39.24■■■■□ 3.87
TCF12-215ENST00000560190 SCRIBQ14160 1630 aa39.23■■■■□ 3.87
TCF12-215ENST00000560190 CC2D2AQ9P2K1 1620 aa38.96■■■■□ 3.83
TCF12-215ENST00000560190 EIF4G1Q04637 1599 aaKnown RBP38.86■■■■□ 3.81
TCF12-215ENST00000560190 CECR2Q9BXF3 1484 aa38.83■■■■□ 3.81
TCF12-215ENST00000560190 NCAPD3P42695 1498 aa37.5■■■■□ 3.59
TCF12-215ENST00000560190 ATAD2BQ9ULI0 1458 aa37.4■■■■□ 3.58
TCF12-215ENST00000560190 SMARCA4P51532 1647 aa37.39■■■■□ 3.58
TCF12-215ENST00000560190 SMARCA2P51531 1590 aa37.29■■■■□ 3.56
TCF12-215ENST00000560190 HMGXB3Q12766 1538 aa37.29■■■■□ 3.56
TCF12-215ENST00000560190 DNAJC5Q9H3Z4 198 aa37.21■■■■□ 3.55
TCF12-215ENST00000560190 ERCC6Q03468 1493 aa37.2■■■■□ 3.55
TCF12-215ENST00000560190 CUX2O14529 1486 aa37.19■■■■□ 3.54
TCF12-215ENST00000560190 BAZ1AQ9NRL2 1556 aaPredicted RBP37.14■■■■□ 3.54
TCF12-215ENST00000560190 BAZ1BQ9UIG0 1483 aaKnown RBP37.04■■■■□ 3.52
TCF12-215ENST00000560190 NESP48681 1621 aa37.03■■■■□ 3.52
TCF12-215ENST00000560190 PEG3Q9GZU2 1588 aa37.02■■■■□ 3.52
TCF12-215ENST00000560190 MROH2BQ7Z745 1585 aa36.89■■■■□ 3.5
TCF12-215ENST00000560190 THOC2Q8NI27 1593 aaKnown RBP36.74■■■■□ 3.47
TCF12-215ENST00000560190 LAMC3Q9Y6N6 1575 aa36.72■■■■□ 3.47
TCF12-215ENST00000560190 KIF21AQ7Z4S6 1674 aa36.59■■■■□ 3.45
TCF12-215ENST00000560190 WIZO95785 1651 aa36.45■■■■□ 3.43
TCF12-215ENST00000560190 PDS5BQ9NTI5 1447 aa36.44■■■■□ 3.42
TCF12-215ENST00000560190 CADPSQ9ULU8 1353 aa36.33■■■■□ 3.41
TCF12-215ENST00000560190 MRC2Q9UBG0 1479 aa36.21■■■■□ 3.39
TCF12-215ENST00000560190 WDR62O43379 1518 aa36.16■■■■□ 3.38
TCF12-215ENST00000560190 CEP164Q9UPV0 1460 aa36.04■■■■□ 3.36
TCF12-215ENST00000560190 RSF1Q96T23 1441 aaPredicted RBP36.03■■■■□ 3.36
TCF12-215ENST00000560190 FANCD2Q9BXW9 1451 aa35.98■■■■□ 3.35
TCF12-215ENST00000560190 TOP2AP11388 1531 aaKnown RBP35.98■■■■□ 3.35
TCF12-215ENST00000560190 CFTRP13569 1480 aa35.94■■■■□ 3.34
TCF12-215ENST00000560190 URB2Q14146 1524 aaKnown RBP35.73■■■■□ 3.31
TCF12-215ENST00000560190 PRDM2Q13029 1718 aa35.68■■■■□ 3.3
TCF12-215ENST00000560190 TRIM41Q8WV44 630 aa35.55■■■■□ 3.28
TCF12-215ENST00000560190 CCDC88BA6NC98 1476 aa35.52■■■■□ 3.28
TCF12-215ENST00000560190 OSCARQ8IYS5 282 aa35.34■■■■□ 3.25
TCF12-215ENST00000560190 ZNF608Q9ULD9 1512 aaPredicted RBP35.31■■■■□ 3.24
TCF12-215ENST00000560190 IFT140Q96RY7 1462 aa35.3■■■■□ 3.24
TCF12-215ENST00000560190 TOPBP1Q92547 1522 aa35.3■■■■□ 3.24
TCF12-215ENST00000560190 DNMBPQ6XZF7 1577 aa35.18■■■■□ 3.22
TCF12-215ENST00000560190 EIF4G3O43432 1585 aaKnown RBP35.16■■■■□ 3.22
TCF12-215ENST00000560190 ABCC8Q09428 1581 aa35.13■■■■□ 3.21
TCF12-215ENST00000560190 RIMBP3CA6NJZ7 1639 aa35.08■■■■□ 3.21
TCF12-215ENST00000560190 RIMBP3BA6NNM3 1639 aa35.08■■■■□ 3.21
TCF12-215ENST00000560190 RIMBP3Q9UFD9 1639 aa35.08■■■■□ 3.21
TCF12-215ENST00000560190 TARBP1Q13395 1621 aaKnown RBP35.03■■■■□ 3.2
TCF12-215ENST00000560190 POLA1P09884 1462 aaPredicted RBP34.95■■■■□ 3.19
TCF12-215ENST00000560190 ARHGEF11O15085 1522 aa34.94■■■■□ 3.18
TCF12-215ENST00000560190 CHD1O14646 1710 aa34.92■■■■□ 3.18
TCF12-215ENST00000560190 AQRO60306 1485 aaKnown RBP eCLIP34.91■■■■□ 3.183e-10■■■□□ 17.5
TCF12-215ENST00000560190 RAD54L2Q9Y4B4 1467 aa34.8■■■■□ 3.16
TCF12-215ENST00000560190 FGD5Q6ZNL6 1462 aa34.71■■■■□ 3.15
TCF12-215ENST00000560190 SOGA1O94964 1423 aa34.7■■■■□ 3.15
TCF12-215ENST00000560190 CUX1P39880 1505 aa34.68■■■■□ 3.14
TCF12-215ENST00000560190 TDRD9Q8NDG6 1382 aaKnown RBP34.66■■■■□ 3.14
TCF12-215ENST00000560190 WDR97A6NE52 1622 aa34.64■■■■□ 3.14
TCF12-215ENST00000560190 FBLN2P98095 1184 aa34.63■■■■□ 3.13
TCF12-215ENST00000560190 SNAPC4Q5SXM2 1469 aa34.61■■■■□ 3.13
TCF12-215ENST00000560190 ARAP1Q96P48 1450 aa34.6■■■■□ 3.13
TCF12-215ENST00000560190 CYB5RLQ6IPT4 315 aa34.55■■■■□ 3.12
TCF12-215ENST00000560190 CLASP1Q7Z460 1538 aa34.5■■■■□ 3.11
TCF12-215ENST00000560190 MAGI1Q96QZ7 1491 aaPredicted RBP34.48■■■■□ 3.11
TCF12-215ENST00000560190 GRIN2BQ13224 1484 aa34.45■■■■□ 3.1
TCF12-215ENST00000560190 SYNJ1O43426 1573 aa34.41■■■■□ 3.1
TCF12-215ENST00000560190 PBRM1Q86U86 1689 aa34.41■■■■□ 3.1
TCF12-215ENST00000560190 SYNJ2O15056 1496 aa34.37■■■■□ 3.09
TCF12-215ENST00000560190 CHMP7Q8WUX9 453 aaPredicted RBP34.34■■■■□ 3.09
TCF12-215ENST00000560190 ABCA5Q8WWZ7 1642 aa34.32■■■■□ 3.08
TCF12-215ENST00000560190 GAPVD1Q14C86 1478 aa34.31■■■■□ 3.08
TCF12-215ENST00000560190 ABCA10Q8WWZ4 1543 aa34.29■■■■□ 3.08
TCF12-215ENST00000560190 SUPT5HO00267 1087 aaKnown RBP34.25■■■■□ 3.07
TCF12-215ENST00000560190 TRHP20396 242 aaPredicted RBP34.19■■■■□ 3.06
TCF12-215ENST00000560190 BIVM-ERCC5R4GMW8 1640 aa34.11■■■■□ 3.05
TCF12-215ENST00000560190 TOP2BQ02880 1626 aa34.08■■■■□ 3.05
TCF12-215ENST00000560190 ADAMTS12P58397 1594 aa34.07■■■■□ 3.05
TCF12-215ENST00000560190 WRNQ14191 1432 aaPredicted RBP eCLIP34.07■■■■□ 3.04
TCF12-215ENST00000560190 GRIN2AQ12879 1464 aa34.04■■■■□ 3.04
TCF12-215ENST00000560190 CEP170Q5SW79 1584 aa33.98■■■■□ 3.03
TCF12-215ENST00000560190 ERCC6L2Q5T890 1561 aa33.97■■■■□ 3.03
TCF12-215ENST00000560190 NUP160Q12769 1436 aa33.93■■■■□ 3.02
TCF12-215ENST00000560190 FHAD1B1AJZ9 1412 aa33.87■■■■□ 3.01
TCF12-215ENST00000560190 ERICH3Q5RHP9 1530 aa33.85■■■■□ 3.01
TCF12-215ENST00000560190 SHROOM2Q13796 1616 aa33.83■■■■□ 3.01
TCF12-215ENST00000560190 RUSC2Q8N2Y8 1516 aa33.61■■■□□ 2.97
TCF12-215ENST00000560190 PRG4Q92954 1404 aaPredicted RBP33.56■■■□□ 2.96
TCF12-215ENST00000560190 KIF13AQ9H1H9 1805 aa33.46■■■□□ 2.95
TCF12-215ENST00000560190 JPH4Q96JJ6 628 aa33.45■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms