RNA–Protein interactions for RNA: ENST00000404666.6

VSNL1-202, Transcript of visinin like 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene VSNL1, Length 992 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-202ENST00000404666 NISCHQ9Y2I1 1504 aa28.26■■■□□ 2.11
VSNL1-202ENST00000404666 CCDC180Q9P1Z9 1646 aa25.22■■□□□ 1.63
VSNL1-202ENST00000404666 ABCC9O60706 1549 aa24.44■■□□□ 1.5
VSNL1-202ENST00000404666 NACADO15069 1562 aa23.65■■□□□ 1.38
VSNL1-202ENST00000404666 RB1CC1Q8TDY2 1594 aa23.64■■□□□ 1.37
VSNL1-202ENST00000404666 MYO15BQ96JP2 1530 aa23.6■■□□□ 1.37
VSNL1-202ENST00000404666 ZCCHC6Q5VYS8 1495 aaKnown RBP23.57■■□□□ 1.36
VSNL1-202ENST00000404666 DCAF1Q9Y4B6 1507 aa23.49■■□□□ 1.35
VSNL1-202ENST00000404666 DCAF8L2P0C7V8 631 aa23.3■■□□□ 1.32
VSNL1-202ENST00000404666 UNC13AQ9UPW8 1703 aa23.17■■□□□ 1.3
VSNL1-202ENST00000404666 BICRAQ9NZM4 1560 aa22.95■■□□□ 1.26
VSNL1-202ENST00000404666 SCRIBQ14160 1630 aa22.85■■□□□ 1.25
VSNL1-202ENST00000404666 SHROOM4Q9ULL8 1493 aa22.8■■□□□ 1.24
VSNL1-202ENST00000404666 PABPN1Q86U42 306 aaKnown RBP eCLIP22.75■■□□□ 1.23
VSNL1-202ENST00000404666 DNAJC5BQ9UF47 199 aa22.39■■□□□ 1.17
VSNL1-202ENST00000404666 EIF4G1Q04637 1599 aaKnown RBP22.31■■□□□ 1.16
VSNL1-202ENST00000404666 CC2D2AQ9P2K1 1620 aa22.2■■□□□ 1.14
VSNL1-202ENST00000404666 CECR2Q9BXF3 1484 aa22.01■■□□□ 1.11
VSNL1-202ENST00000404666 SMARCA4P51532 1647 aa21.94■■□□□ 1.1
VSNL1-202ENST00000404666 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
VSNL1-202ENST00000404666 PEG3Q9GZU2 1588 aa21.81■■□□□ 1.08
VSNL1-202ENST00000404666 NCAPD3P42695 1498 aa21.8■■□□□ 1.08
VSNL1-202ENST00000404666 SMARCA2P51531 1590 aa21.79■■□□□ 1.08
VSNL1-202ENST00000404666 ATAD2BQ9ULI0 1458 aa21.77■■□□□ 1.08
VSNL1-202ENST00000404666 HMGXB3Q12766 1538 aa21.74■■□□□ 1.07
VSNL1-202ENST00000404666 MROH2BQ7Z745 1585 aa21.74■■□□□ 1.07
VSNL1-202ENST00000404666 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
VSNL1-202ENST00000404666 WIZO95785 1651 aa21.51■■□□□ 1.03
VSNL1-202ENST00000404666 RSF1Q96T23 1441 aaPredicted RBP21.49■■□□□ 1.03
VSNL1-202ENST00000404666 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
VSNL1-202ENST00000404666 LAMC3Q9Y6N6 1575 aa21.24■□□□□ 0.99
VSNL1-202ENST00000404666 NESP48681 1621 aa21.18■□□□□ 0.98
VSNL1-202ENST00000404666 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
VSNL1-202ENST00000404666 ERCC6Q03468 1493 aa21.06■□□□□ 0.96
VSNL1-202ENST00000404666 CFTRP13569 1480 aa21.04■□□□□ 0.96
VSNL1-202ENST00000404666 PDS5BQ9NTI5 1447 aa21.03■□□□□ 0.96
VSNL1-202ENST00000404666 KIF21AQ7Z4S6 1674 aa21.02■□□□□ 0.95
VSNL1-202ENST00000404666 CCDC88BA6NC98 1476 aa21.01■□□□□ 0.95
VSNL1-202ENST00000404666 PRDM2Q13029 1718 aa20.98■□□□□ 0.95
VSNL1-202ENST00000404666 THOC2Q8NI27 1593 aaKnown RBP20.97■□□□□ 0.95
VSNL1-202ENST00000404666 CUX2O14529 1486 aa20.95■□□□□ 0.94
VSNL1-202ENST00000404666 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
VSNL1-202ENST00000404666 CEP164Q9UPV0 1460 aa20.84■□□□□ 0.93
VSNL1-202ENST00000404666 MRC2Q9UBG0 1479 aa20.82■□□□□ 0.92
VSNL1-202ENST00000404666 WDR62O43379 1518 aa20.81■□□□□ 0.92
VSNL1-202ENST00000404666 SUPT5HO00267 1087 aaKnown RBP20.75■□□□□ 0.91
VSNL1-202ENST00000404666 URB2Q14146 1524 aaKnown RBP20.67■□□□□ 0.9
VSNL1-202ENST00000404666 ABCC8Q09428 1581 aa20.59■□□□□ 0.89
VSNL1-202ENST00000404666 DNMBPQ6XZF7 1577 aa20.56■□□□□ 0.88
VSNL1-202ENST00000404666 TOPBP1Q92547 1522 aa20.55■□□□□ 0.88
VSNL1-202ENST00000404666 IFT140Q96RY7 1462 aa20.43■□□□□ 0.86
VSNL1-202ENST00000404666 CUX1P39880 1505 aa20.39■□□□□ 0.85
VSNL1-202ENST00000404666 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
VSNL1-202ENST00000404666 POLA1P09884 1462 aaPredicted RBP20.38■□□□□ 0.85
VSNL1-202ENST00000404666 FGD5Q6ZNL6 1462 aa20.3■□□□□ 0.84
VSNL1-202ENST00000404666 WDR97A6NE52 1622 aa20.3■□□□□ 0.84
VSNL1-202ENST00000404666 BIVM-ERCC5R4GMW8 1640 aa20.3■□□□□ 0.84
VSNL1-202ENST00000404666 ZNF608Q9ULD9 1512 aaPredicted RBP20.28■□□□□ 0.84
VSNL1-202ENST00000404666 TOP2BQ02880 1626 aa20.28■□□□□ 0.84
VSNL1-202ENST00000404666 EIF4G3O43432 1585 aaKnown RBP20.27■□□□□ 0.84
VSNL1-202ENST00000404666 WRNQ14191 1432 aaPredicted RBP eCLIP20.25■□□□□ 0.83
VSNL1-202ENST00000404666 SYNJ1O43426 1573 aa20.23■□□□□ 0.83
VSNL1-202ENST00000404666 SOGA1O94964 1423 aa20.23■□□□□ 0.83
VSNL1-202ENST00000404666 RAD54L2Q9Y4B4 1467 aa20.22■□□□□ 0.83
VSNL1-202ENST00000404666 DNAJC5Q9H3Z4 198 aa20.2■□□□□ 0.82
VSNL1-202ENST00000404666 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
VSNL1-202ENST00000404666 AQRO60306 1485 aaKnown RBP eCLIP20.14■□□□□ 0.813e-6■■■□□ 19
VSNL1-202ENST00000404666 ABCA5Q8WWZ7 1642 aa20.12■□□□□ 0.81
VSNL1-202ENST00000404666 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.8
VSNL1-202ENST00000404666 PBRM1Q86U86 1689 aa20.07■□□□□ 0.8
VSNL1-202ENST00000404666 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
VSNL1-202ENST00000404666 GAPVD1Q14C86 1478 aa20.03■□□□□ 0.8
VSNL1-202ENST00000404666 MAGI1Q96QZ7 1491 aaPredicted RBP20.03■□□□□ 0.8
VSNL1-202ENST00000404666 CHD1O14646 1710 aa20.02■□□□□ 0.79
VSNL1-202ENST00000404666 SNAPC4Q5SXM2 1469 aa19.99■□□□□ 0.79
VSNL1-202ENST00000404666 OSCARQ8IYS5 282 aa19.97■□□□□ 0.79
VSNL1-202ENST00000404666 ERICH3Q5RHP9 1530 aa19.94■□□□□ 0.78
VSNL1-202ENST00000404666 SYNJ2O15056 1496 aa19.93■□□□□ 0.78
VSNL1-202ENST00000404666 ADAMTS12P58397 1594 aa19.89■□□□□ 0.77
VSNL1-202ENST00000404666 CLASP1Q7Z460 1538 aa19.82■□□□□ 0.76
VSNL1-202ENST00000404666 FHAD1B1AJZ9 1412 aa19.82■□□□□ 0.76
VSNL1-202ENST00000404666 KIF27Q86VH2 1401 aa19.82■□□□□ 0.76
VSNL1-202ENST00000404666 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
VSNL1-202ENST00000404666 CHMP7Q8WUX9 453 aaPredicted RBP19.79■□□□□ 0.76
VSNL1-202ENST00000404666 CUL7Q14999 1698 aa19.78■□□□□ 0.76
VSNL1-202ENST00000404666 FBLN2P98095 1184 aa19.77■□□□□ 0.76
VSNL1-202ENST00000404666 NUP160Q12769 1436 aa19.74■□□□□ 0.75
VSNL1-202ENST00000404666 RIMBP3CA6NJZ7 1639 aa19.73■□□□□ 0.75
VSNL1-202ENST00000404666 RIMBP3BA6NNM3 1639 aa19.73■□□□□ 0.75
VSNL1-202ENST00000404666 RIMBP3Q9UFD9 1639 aa19.73■□□□□ 0.75
VSNL1-202ENST00000404666 IGF1RP08069 1367 aa19.73■□□□□ 0.75
VSNL1-202ENST00000404666 ARHGEF11O15085 1522 aa19.72■□□□□ 0.75
VSNL1-202ENST00000404666 CEP170Q5SW79 1584 aa19.71■□□□□ 0.75
VSNL1-202ENST00000404666 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
VSNL1-202ENST00000404666 SHROOM2Q13796 1616 aa19.65■□□□□ 0.74
VSNL1-202ENST00000404666 RUSC2Q8N2Y8 1516 aa19.61■□□□□ 0.73
VSNL1-202ENST00000404666 CARMIL1Q5VZK9 1371 aa19.59■□□□□ 0.73
VSNL1-202ENST00000404666 ARAP1Q96P48 1450 aa19.56■□□□□ 0.72
VSNL1-202ENST00000404666 KIAA0586Q9BVV6 1533 aa19.53■□□□□ 0.72
VSNL1-202ENST00000404666 RAPGEF2Q9Y4G8 1499 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms