RNA–Protein interactions for RNA: ENST00000258739.8

KDELR2-201, Transcript of KDEL endoplasmic reticulum protein retention receptor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDELR2, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR2-201ENST00000258739 NISCHQ9Y2I1 1504 aa30.9■■■□□ 2.54
KDELR2-201ENST00000258739 CCDC180Q9P1Z9 1646 aa26.58■■□□□ 1.85
KDELR2-201ENST00000258739 ZCCHC6Q5VYS8 1495 aaKnown RBP26.01■■□□□ 1.75
KDELR2-201ENST00000258739 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
KDELR2-201ENST00000258739 DCAF8L2P0C7V8 631 aa25.78■■□□□ 1.72
KDELR2-201ENST00000258739 DCAF1Q9Y4B6 1507 aa25.36■■□□□ 1.65
KDELR2-201ENST00000258739 ABCC9O60706 1549 aa25.2■■□□□ 1.62
KDELR2-201ENST00000258739 SUPT5HO00267 1087 aaKnown RBP25.03■■□□□ 1.6
KDELR2-201ENST00000258739 MYO15BQ96JP2 1530 aa24.87■■□□□ 1.57
KDELR2-201ENST00000258739 SCRIBQ14160 1630 aa24.8■■□□□ 1.56
KDELR2-201ENST00000258739 NACADO15069 1562 aa24.72■■□□□ 1.55
KDELR2-201ENST00000258739 RB1CC1Q8TDY2 1594 aa24.47■■□□□ 1.51
KDELR2-201ENST00000258739 CHIC1Q5VXU3 224 aa24.27■■□□□ 1.48
KDELR2-201ENST00000258739 RSF1Q96T23 1441 aaPredicted RBP24.2■■□□□ 1.47
KDELR2-201ENST00000258739 CECR2Q9BXF3 1484 aa24.17■■□□□ 1.46
KDELR2-201ENST00000258739 HRCP23327 699 aa24.14■■□□□ 1.45
KDELR2-201ENST00000258739 UNC13AQ9UPW8 1703 aa24.11■■□□□ 1.45
KDELR2-201ENST00000258739 MROH2BQ7Z745 1585 aa24■■□□□ 1.43
KDELR2-201ENST00000258739 PABPN1Q86U42 306 aaKnown RBP eCLIP23.96■■□□□ 1.433e-6■■■■□ 22
KDELR2-201ENST00000258739 PCGF6Q9BYE7 350 aa23.87■■□□□ 1.41
KDELR2-201ENST00000258739 BICRAQ9NZM4 1560 aa23.85■■□□□ 1.41
KDELR2-201ENST00000258739 WIZO95785 1651 aa23.83■■□□□ 1.41
KDELR2-201ENST00000258739 BAZ1AQ9NRL2 1556 aaPredicted RBP23.77■■□□□ 1.4
KDELR2-201ENST00000258739 PPARGC1BQ86YN6 1023 aaKnown RBP23.75■■□□□ 1.39
KDELR2-201ENST00000258739 SMARCA4P51532 1647 aa23.68■■□□□ 1.38
KDELR2-201ENST00000258739 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
KDELR2-201ENST00000258739 TOP2AP11388 1531 aaKnown RBP23.44■■□□□ 1.34
KDELR2-201ENST00000258739 TRIM26Q12899 539 aaPredicted RBP23.4■■□□□ 1.34
KDELR2-201ENST00000258739 TRIM41Q8WV44 630 aa23.35■■□□□ 1.33
KDELR2-201ENST00000258739 CCDC88BA6NC98 1476 aa23.33■■□□□ 1.33
KDELR2-201ENST00000258739 SMARCA2P51531 1590 aa23.3■■□□□ 1.32
KDELR2-201ENST00000258739 PEG3Q9GZU2 1588 aa23.25■■□□□ 1.31
KDELR2-201ENST00000258739 ATAD2BQ9ULI0 1458 aa23.23■■□□□ 1.31
KDELR2-201ENST00000258739 EIF4G1Q04637 1599 aaKnown RBP23.22■■□□□ 1.31
KDELR2-201ENST00000258739 FAM9AQ8IZU1 332 aaPredicted RBP23.15■■□□□ 1.3
KDELR2-201ENST00000258739 ZEB1P37275 1124 aaPredicted RBP23.12■■□□□ 1.29
KDELR2-201ENST00000258739 BAZ1BQ9UIG0 1483 aaKnown RBP23.12■■□□□ 1.29
KDELR2-201ENST00000258739 ABCC8Q09428 1581 aa23.07■■□□□ 1.28
KDELR2-201ENST00000258739 EHMT2Q96KQ7 1210 aa22.98■■□□□ 1.27
KDELR2-201ENST00000258739 NCAPD3P42695 1498 aa22.89■■□□□ 1.26
KDELR2-201ENST00000258739 HMGXB3Q12766 1538 aa22.83■■□□□ 1.25
KDELR2-201ENST00000258739 WRNQ14191 1432 aaPredicted RBP eCLIP22.74■■□□□ 1.23
KDELR2-201ENST00000258739 SOGA1O94964 1423 aa22.72■■□□□ 1.23
KDELR2-201ENST00000258739 CC2D2AQ9P2K1 1620 aa22.68■■□□□ 1.22
KDELR2-201ENST00000258739 SCAF1Q9H7N4 1312 aaKnown RBP22.68■■□□□ 1.22
KDELR2-201ENST00000258739 SYNJ1O43426 1573 aa22.67■■□□□ 1.22
KDELR2-201ENST00000258739 RUSC2Q8N2Y8 1516 aa22.65■■□□□ 1.22
KDELR2-201ENST00000258739 PELP1Q8IZL8 1130 aaKnown RBP22.55■■□□□ 1.2
KDELR2-201ENST00000258739 CFTRP13569 1480 aa22.53■■□□□ 1.2
KDELR2-201ENST00000258739 CSRNP3Q8WYN3 585 aa22.5■■□□□ 1.19
KDELR2-201ENST00000258739 TOP2BQ02880 1626 aa22.44■■□□□ 1.18
KDELR2-201ENST00000258739 EEA1Q15075 1411 aa22.43■■□□□ 1.18
KDELR2-201ENST00000258739 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
KDELR2-201ENST00000258739 CUX1P39880 1505 aa22.39■■□□□ 1.17
KDELR2-201ENST00000258739 CCER1Q8TC90 406 aaPredicted RBP22.36■■□□□ 1.17
KDELR2-201ENST00000258739 DNAJC5BQ9UF47 199 aa22.36■■□□□ 1.17
KDELR2-201ENST00000258739 BIVM-ERCC5R4GMW8 1640 aa22.36■■□□□ 1.17
KDELR2-201ENST00000258739 UBTFP17480 764 aaKnown RBP22.34■■□□□ 1.17
KDELR2-201ENST00000258739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.32■■□□□ 1.16
KDELR2-201ENST00000258739 PRDM2Q13029 1718 aa22.29■■□□□ 1.16
KDELR2-201ENST00000258739 TNIKQ9UKE5 1360 aa22.28■■□□□ 1.16
KDELR2-201ENST00000258739 CEP162Q5TB80 1403 aa22.27■■□□□ 1.16
KDELR2-201ENST00000258739 GOLGA3Q08378 1498 aa22.27■■□□□ 1.16
KDELR2-201ENST00000258739 NESP48681 1621 aa22.27■■□□□ 1.15
KDELR2-201ENST00000258739 CEP164Q9UPV0 1460 aa22.21■■□□□ 1.15
KDELR2-201ENST00000258739 RAPGEF2Q9Y4G8 1499 aa22.19■■□□□ 1.14
KDELR2-201ENST00000258739 KIF21BO75037 1637 aa22.18■■□□□ 1.14
KDELR2-201ENST00000258739 FANCD2Q9BXW9 1451 aa22.18■■□□□ 1.14
KDELR2-201ENST00000258739 ACIN1Q9UKV3 1341 aaKnown RBP22.14■■□□□ 1.13
KDELR2-201ENST00000258739 NEUROD1Q13562 356 aa22.1■■□□□ 1.13
KDELR2-201ENST00000258739 DIEXFQ68CQ4 756 aaKnown RBP22.1■■□□□ 1.13
KDELR2-201ENST00000258739 RANGAP1P46060 587 aaPredicted RBP22.09■■□□□ 1.13
KDELR2-201ENST00000258739 KIF27Q86VH2 1401 aa22.09■■□□□ 1.13
KDELR2-201ENST00000258739 FGD5Q6ZNL6 1462 aa22.08■■□□□ 1.13
KDELR2-201ENST00000258739 CENPBP07199 599 aaPredicted RBP22.07■■□□□ 1.12
KDELR2-201ENST00000258739 TTBK1Q5TCY1 1321 aaPredicted RBP22.05■■□□□ 1.12
KDELR2-201ENST00000258739 PRXQ9BXM0 1461 aa22.04■■□□□ 1.12
KDELR2-201ENST00000258739 CUX2O14529 1486 aa22.03■■□□□ 1.12
KDELR2-201ENST00000258739 LAMC3Q9Y6N6 1575 aa22.01■■□□□ 1.11
KDELR2-201ENST00000258739 CLIP1P30622 1438 aa22■■□□□ 1.11
KDELR2-201ENST00000258739 TOPBP1Q92547 1522 aa21.97■■□□□ 1.11
KDELR2-201ENST00000258739 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
KDELR2-201ENST00000258739 DNMBPQ6XZF7 1577 aa21.96■■□□□ 1.11
KDELR2-201ENST00000258739 GTF3C3Q9Y5Q9 886 aa21.95■■□□□ 1.1
KDELR2-201ENST00000258739 ERICH3Q5RHP9 1530 aa21.95■■□□□ 1.1
KDELR2-201ENST00000258739 IGF1RP08069 1367 aa21.93■■□□□ 1.1
KDELR2-201ENST00000258739 POLA1P09884 1462 aaPredicted RBP21.92■■□□□ 1.1
KDELR2-201ENST00000258739 URB2Q14146 1524 aaKnown RBP21.92■■□□□ 1.1
KDELR2-201ENST00000258739 PDS5BQ9NTI5 1447 aa21.88■■□□□ 1.09
KDELR2-201ENST00000258739 KIF21AQ7Z4S6 1674 aa21.86■■□□□ 1.09
KDELR2-201ENST00000258739 ZNF316A6NFI3 1004 aaPredicted RBP21.85■■□□□ 1.09
KDELR2-201ENST00000258739 CARMIL1Q5VZK9 1371 aa21.82■■□□□ 1.08
KDELR2-201ENST00000258739 VPS8Q8N3P4 1428 aa21.81■■□□□ 1.08
KDELR2-201ENST00000258739 ABCA10Q8WWZ4 1543 aa21.81■■□□□ 1.08
KDELR2-201ENST00000258739 ARAP1Q96P48 1450 aa21.74■■□□□ 1.07
KDELR2-201ENST00000258739 TDRD9Q8NDG6 1382 aaKnown RBP21.74■■□□□ 1.07
KDELR2-201ENST00000258739 ARHGAP35Q9NRY4 1499 aa21.67■■□□□ 1.06
KDELR2-201ENST00000258739 WDR97A6NE52 1622 aa21.67■■□□□ 1.06
KDELR2-201ENST00000258739 APLP2Q06481 763 aa21.65■■□□□ 1.06
KDELR2-201ENST00000258739 HNRNPUL2Q1KMD3 747 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 397.9 ms