RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 NISCHQ9Y2I1 1504 aa41.59■■■■■ 4.25
SDHA-206ENST00000505555 CCDC180Q9P1Z9 1646 aa35.52■■■■□ 3.28
SDHA-206ENST00000505555 SHROOM4Q9ULL8 1493 aa35.16■■■■□ 3.22
SDHA-206ENST00000505555 ZCCHC6Q5VYS8 1495 aaKnown RBP35.08■■■■□ 3.21
SDHA-206ENST00000505555 DCAF8L2P0C7V8 631 aa34.63■■■■□ 3.13
SDHA-206ENST00000505555 SUPT5HO00267 1087 aaKnown RBP34.3■■■■□ 3.08
SDHA-206ENST00000505555 DCAF1Q9Y4B6 1507 aa34.12■■■■□ 3.05
SDHA-206ENST00000505555 ABCC9O60706 1549 aa33.29■■■□□ 2.92
SDHA-206ENST00000505555 MYO15BQ96JP2 1530 aa33.28■■■□□ 2.92
SDHA-206ENST00000505555 SCRIBQ14160 1630 aa33.24■■■□□ 2.91
SDHA-206ENST00000505555 CHIC1Q5VXU3 224 aa33.16■■■□□ 2.9
SDHA-206ENST00000505555 NACADO15069 1562 aa32.96■■■□□ 2.87
SDHA-206ENST00000505555 RSF1Q96T23 1441 aaPredicted RBP32.76■■■□□ 2.84
SDHA-206ENST00000505555 RB1CC1Q8TDY2 1594 aa32.5■■■□□ 2.79
SDHA-206ENST00000505555 CECR2Q9BXF3 1484 aa32.48■■■□□ 2.79
SDHA-206ENST00000505555 MROH2BQ7Z745 1585 aa32.32■■■□□ 2.76
SDHA-206ENST00000505555 LOC105371045A0A1W2PR82 267 aa32.18■■■□□ 2.74
SDHA-206ENST00000505555 WIZO95785 1651 aa32.11■■■□□ 2.73
SDHA-206ENST00000505555 TRIM41Q8WV44 630 aa31.99■■■□□ 2.71
SDHA-206ENST00000505555 UNC13AQ9UPW8 1703 aa31.99■■■□□ 2.71
SDHA-206ENST00000505555 BAZ1AQ9NRL2 1556 aaPredicted RBP31.96■■■□□ 2.71
SDHA-206ENST00000505555 PABPN1Q86U42 306 aaKnown RBP eCLIP31.79■■■□□ 2.68
SDHA-206ENST00000505555 SMARCA4P51532 1647 aa31.74■■■□□ 2.67
SDHA-206ENST00000505555 FAM9AQ8IZU1 332 aaPredicted RBP31.71■■■□□ 2.67
SDHA-206ENST00000505555 PCGF6Q9BYE7 350 aa31.69■■■□□ 2.66
SDHA-206ENST00000505555 BICRAQ9NZM4 1560 aa31.65■■■□□ 2.66
SDHA-206ENST00000505555 TOP2AP11388 1531 aaKnown RBP31.6■■■□□ 2.65
SDHA-206ENST00000505555 CCDC88BA6NC98 1476 aa31.49■■■□□ 2.63
SDHA-206ENST00000505555 EIF4G1Q04637 1599 aaKnown RBP31.47■■■□□ 2.63
SDHA-206ENST00000505555 EHMT2Q96KQ7 1210 aa31.45■■■□□ 2.63
SDHA-206ENST00000505555 SMARCA2P51531 1590 aa31.41■■■□□ 2.62
SDHA-206ENST00000505555 HRCP23327 699 aa31.39■■■□□ 2.61
SDHA-206ENST00000505555 ABCC8Q09428 1581 aa31.25■■■□□ 2.59
SDHA-206ENST00000505555 TRIM26Q12899 539 aaPredicted RBP31.18■■■□□ 2.58
SDHA-206ENST00000505555 PEG3Q9GZU2 1588 aa31.15■■■□□ 2.58
SDHA-206ENST00000505555 ATAD2BQ9ULI0 1458 aa31.05■■■□□ 2.56
SDHA-206ENST00000505555 BAZ1BQ9UIG0 1483 aaKnown RBP30.93■■■□□ 2.54
SDHA-206ENST00000505555 SOGA1O94964 1423 aa30.9■■■□□ 2.54
SDHA-206ENST00000505555 PPARGC1BQ86YN6 1023 aaKnown RBP30.83■■■□□ 2.53
SDHA-206ENST00000505555 WRNQ14191 1432 aaPredicted RBP eCLIP30.78■■■□□ 2.52
SDHA-206ENST00000505555 RUSC2Q8N2Y8 1516 aa30.77■■■□□ 2.52
SDHA-206ENST00000505555 CSRNP3Q8WYN3 585 aa30.69■■■□□ 2.5
SDHA-206ENST00000505555 SYNJ1O43426 1573 aa30.63■■■□□ 2.49
SDHA-206ENST00000505555 EEA1Q15075 1411 aa30.63■■■□□ 2.49
SDHA-206ENST00000505555 CEP162Q5TB80 1403 aa30.54■■■□□ 2.48
SDHA-206ENST00000505555 UBTFP17480 764 aaKnown RBP30.53■■■□□ 2.48
SDHA-206ENST00000505555 TNIKQ9UKE5 1360 aa30.53■■■□□ 2.48
SDHA-206ENST00000505555 NCAPD3P42695 1498 aa30.52■■■□□ 2.48
SDHA-206ENST00000505555 HMGXB3Q12766 1538 aa30.46■■■□□ 2.47
SDHA-206ENST00000505555 GOLGA3Q08378 1498 aa30.41■■■□□ 2.46
SDHA-206ENST00000505555 TTBK1Q5TCY1 1321 aaPredicted RBP30.32■■■□□ 2.44
SDHA-206ENST00000505555 TOP2BQ02880 1626 aa30.29■■■□□ 2.44
SDHA-206ENST00000505555 CEP164Q9UPV0 1460 aa30.28■■■□□ 2.44
SDHA-206ENST00000505555 ZEB1P37275 1124 aaPredicted RBP30.28■■■□□ 2.44
SDHA-206ENST00000505555 KIF21BO75037 1637 aa30.23■■■□□ 2.43
SDHA-206ENST00000505555 BIVM-ERCC5R4GMW8 1640 aa30.17■■■□□ 2.42
SDHA-206ENST00000505555 CFTRP13569 1480 aa30.16■■■□□ 2.42
SDHA-206ENST00000505555 RAPGEF2Q9Y4G8 1499 aa30.15■■■□□ 2.42
SDHA-206ENST00000505555 CUX1P39880 1505 aa30.11■■■□□ 2.41
SDHA-206ENST00000505555 CLIP1P30622 1438 aa30.07■■■□□ 2.4
SDHA-206ENST00000505555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.04■■■□□ 2.4
SDHA-206ENST00000505555 RANGAP1P46060 587 aaPredicted RBP30.04■■■□□ 2.4
SDHA-206ENST00000505555 CC2D2AQ9P2K1 1620 aa29.96■■■□□ 2.39
SDHA-206ENST00000505555 CCER1Q8TC90 406 aaPredicted RBP29.92■■■□□ 2.38
SDHA-206ENST00000505555 CADPSQ9ULU8 1353 aa29.92■■■□□ 2.38
SDHA-206ENST00000505555 PRXQ9BXM0 1461 aa29.9■■■□□ 2.38
SDHA-206ENST00000505555 KIF27Q86VH2 1401 aa29.87■■■□□ 2.37
SDHA-206ENST00000505555 VPS8Q8N3P4 1428 aa29.87■■■□□ 2.37
SDHA-206ENST00000505555 ERICH3Q5RHP9 1530 aa29.82■■■□□ 2.36
SDHA-206ENST00000505555 PRDM2Q13029 1718 aa29.82■■■□□ 2.36
SDHA-206ENST00000505555 APLP2Q06481 763 aa29.73■■■□□ 2.35
SDHA-206ENST00000505555 CUX2O14529 1486 aa29.68■■■□□ 2.34
SDHA-206ENST00000505555 FGD5Q6ZNL6 1462 aa29.64■■■□□ 2.33
SDHA-206ENST00000505555 ARAP1Q96P48 1450 aa29.63■■■□□ 2.33
SDHA-206ENST00000505555 FANCD2Q9BXW9 1451 aa29.62■■■□□ 2.33
SDHA-206ENST00000505555 IGF1RP08069 1367 aa29.61■■■□□ 2.33
SDHA-206ENST00000505555 HNRNPUL2Q1KMD3 747 aaKnown RBP29.6■■■□□ 2.33
SDHA-206ENST00000505555 NESP48681 1621 aa29.55■■■□□ 2.32
SDHA-206ENST00000505555 CARMIL1Q5VZK9 1371 aa29.46■■■□□ 2.31
SDHA-206ENST00000505555 KANK4Q5T7N3 995 aaPredicted RBP29.45■■■□□ 2.31
SDHA-206ENST00000505555 ARHGAP35Q9NRY4 1499 aa29.45■■■□□ 2.3
SDHA-206ENST00000505555 RAD54L2Q9Y4B4 1467 aa29.41■■■□□ 2.3
SDHA-206ENST00000505555 DNAJC5BQ9UF47 199 aa29.39■■■□□ 2.3
SDHA-206ENST00000505555 DNMBPQ6XZF7 1577 aa29.39■■■□□ 2.29
SDHA-206ENST00000505555 TOPBP1Q92547 1522 aa29.37■■■□□ 2.29
SDHA-206ENST00000505555 POLA1P09884 1462 aaPredicted RBP29.34■■■□□ 2.29
SDHA-206ENST00000505555 ABCA10Q8WWZ4 1543 aa29.27■■■□□ 2.28
SDHA-206ENST00000505555 LAMC3Q9Y6N6 1575 aa29.25■■■□□ 2.27
SDHA-206ENST00000505555 URB2Q14146 1524 aaKnown RBP29.22■■■□□ 2.27
SDHA-206ENST00000505555 P3H3Q8IVL6 736 aa29.17■■■□□ 2.26
SDHA-206ENST00000505555 PDS5BQ9NTI5 1447 aa29.11■■■□□ 2.25
SDHA-206ENST00000505555 RRBP1Q9P2E9 1410 aaKnown RBP29.11■■■□□ 2.25
SDHA-206ENST00000505555 DIEXFQ68CQ4 756 aaKnown RBP29.08■■■□□ 2.25
SDHA-206ENST00000505555 TDRD9Q8NDG6 1382 aaKnown RBP29.08■■■□□ 2.25
SDHA-206ENST00000505555 TIAM1Q13009 1591 aa29.03■■■□□ 2.24
SDHA-206ENST00000505555 CCNB3Q8WWL7 1395 aa29.03■■■□□ 2.24
SDHA-206ENST00000505555 CUL7Q14999 1698 aa29.02■■■□□ 2.24
SDHA-206ENST00000505555 ATP1B4Q9UN42 357 aaPredicted RBP29.01■■■□□ 2.24
SDHA-206ENST00000505555 WDR97A6NE52 1622 aa29■■■□□ 2.23
SDHA-206ENST00000505555 FHOD3Q2V2M9 1422 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms