RNA–Protein interactions for RNA: ENST00000504309.5

SDHA-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-204ENST00000504309 NISCHQ9Y2I1 1504 aa39.1■■■■□ 3.85
SDHA-204ENST00000504309 CCDC180Q9P1Z9 1646 aa33.77■■■■□ 3
SDHA-204ENST00000504309 ZCCHC6Q5VYS8 1495 aaKnown RBP33.02■■■□□ 2.88
SDHA-204ENST00000504309 SHROOM4Q9ULL8 1493 aa32.6■■■□□ 2.81
SDHA-204ENST00000504309 DCAF1Q9Y4B6 1507 aa32.22■■■□□ 2.75
SDHA-204ENST00000504309 DCAF8L2P0C7V8 631 aa32.14■■■□□ 2.74
SDHA-204ENST00000504309 SUPT5HO00267 1087 aaKnown RBP31.64■■■□□ 2.66
SDHA-204ENST00000504309 MYO15BQ96JP2 1530 aa31.53■■■□□ 2.64
SDHA-204ENST00000504309 ABCC9O60706 1549 aa31.38■■■□□ 2.61
SDHA-204ENST00000504309 SCRIBQ14160 1630 aa31.31■■■□□ 2.6
SDHA-204ENST00000504309 NACADO15069 1562 aa31.2■■■□□ 2.59
SDHA-204ENST00000504309 RB1CC1Q8TDY2 1594 aa30.81■■■□□ 2.52
SDHA-204ENST00000504309 RSF1Q96T23 1441 aaPredicted RBP30.63■■■□□ 2.49
SDHA-204ENST00000504309 CHIC1Q5VXU3 224 aa30.6■■■□□ 2.49
SDHA-204ENST00000504309 UNC13AQ9UPW8 1703 aa30.5■■■□□ 2.47
SDHA-204ENST00000504309 CECR2Q9BXF3 1484 aa30.43■■■□□ 2.46
SDHA-204ENST00000504309 MROH2BQ7Z745 1585 aa30.33■■■□□ 2.45
SDHA-204ENST00000504309 WIZO95785 1651 aa30.2■■■□□ 2.42
SDHA-204ENST00000504309 BAZ1AQ9NRL2 1556 aaPredicted RBP30.12■■■□□ 2.41
SDHA-204ENST00000504309 BICRAQ9NZM4 1560 aa29.98■■■□□ 2.39
SDHA-204ENST00000504309 SMARCA4P51532 1647 aa29.98■■■□□ 2.39
SDHA-204ENST00000504309 TOP2AP11388 1531 aaKnown RBP29.76■■■□□ 2.35
SDHA-204ENST00000504309 PABPN1Q86U42 306 aaKnown RBP eCLIP29.73■■■□□ 2.35
SDHA-204ENST00000504309 EIF4G1Q04637 1599 aaKnown RBP29.67■■■□□ 2.34
SDHA-204ENST00000504309 TRIM41Q8WV44 630 aa29.59■■■□□ 2.33
SDHA-204ENST00000504309 SMARCA2P51531 1590 aa29.57■■■□□ 2.32
SDHA-204ENST00000504309 LOC105371045A0A1W2PR82 267 aa29.56■■■□□ 2.32
SDHA-204ENST00000504309 PEG3Q9GZU2 1588 aa29.49■■■□□ 2.31
SDHA-204ENST00000504309 CCDC88BA6NC98 1476 aa29.48■■■□□ 2.31
SDHA-204ENST00000504309 ABCC8Q09428 1581 aa29.24■■■□□ 2.27
SDHA-204ENST00000504309 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
SDHA-204ENST00000504309 FAM9AQ8IZU1 332 aaPredicted RBP29.22■■■□□ 2.27
SDHA-204ENST00000504309 BAZ1BQ9UIG0 1483 aaKnown RBP29.13■■■□□ 2.25
SDHA-204ENST00000504309 PCGF6Q9BYE7 350 aa28.97■■■□□ 2.23
SDHA-204ENST00000504309 EHMT2Q96KQ7 1210 aa28.9■■■□□ 2.22
SDHA-204ENST00000504309 HMGXB3Q12766 1538 aa28.86■■■□□ 2.21
SDHA-204ENST00000504309 WRNQ14191 1432 aaPredicted RBP eCLIP28.8■■■□□ 2.2
SDHA-204ENST00000504309 NCAPD3P42695 1498 aa28.78■■■□□ 2.2
SDHA-204ENST00000504309 SYNJ1O43426 1573 aa28.78■■■□□ 2.2
SDHA-204ENST00000504309 SOGA1O94964 1423 aa28.76■■■□□ 2.19
SDHA-204ENST00000504309 RUSC2Q8N2Y8 1516 aa28.66■■■□□ 2.18
SDHA-204ENST00000504309 HRCP23327 699 aa28.66■■■□□ 2.18
SDHA-204ENST00000504309 EEA1Q15075 1411 aa28.65■■■□□ 2.18
SDHA-204ENST00000504309 TRIM26Q12899 539 aaPredicted RBP28.65■■■□□ 2.18
SDHA-204ENST00000504309 TOP2BQ02880 1626 aa28.52■■■□□ 2.16
SDHA-204ENST00000504309 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
SDHA-204ENST00000504309 CSRNP3Q8WYN3 585 aa28.48■■■□□ 2.15
SDHA-204ENST00000504309 PRDM2Q13029 1718 aa28.46■■■□□ 2.15
SDHA-204ENST00000504309 CC2D2AQ9P2K1 1620 aa28.42■■■□□ 2.14
SDHA-204ENST00000504309 CEP162Q5TB80 1403 aa28.41■■■□□ 2.14
SDHA-204ENST00000504309 TNIKQ9UKE5 1360 aa28.4■■■□□ 2.14
SDHA-204ENST00000504309 GOLGA3Q08378 1498 aa28.4■■■□□ 2.14
SDHA-204ENST00000504309 KIF21BO75037 1637 aa28.39■■■□□ 2.14
SDHA-204ENST00000504309 CFTRP13569 1480 aa28.39■■■□□ 2.14
SDHA-204ENST00000504309 CEP164Q9UPV0 1460 aa28.31■■■□□ 2.12
SDHA-204ENST00000504309 CUX1P39880 1505 aa28.3■■■□□ 2.12
SDHA-204ENST00000504309 UBTFP17480 764 aaKnown RBP28.24■■■□□ 2.11
SDHA-204ENST00000504309 PPARGC1BQ86YN6 1023 aaKnown RBP28.19■■■□□ 2.1
SDHA-204ENST00000504309 RAPGEF2Q9Y4G8 1499 aa28.14■■■□□ 2.1
SDHA-204ENST00000504309 CADPSQ9ULU8 1353 aa28.11■■■□□ 2.09
SDHA-204ENST00000504309 ERICH3Q5RHP9 1530 aa28.02■■■□□ 2.08
SDHA-204ENST00000504309 PRXQ9BXM0 1461 aa27.99■■■□□ 2.07
SDHA-204ENST00000504309 CLIP1P30622 1438 aa27.98■■■□□ 2.07
SDHA-204ENST00000504309 KIF27Q86VH2 1401 aa27.96■■■□□ 2.07
SDHA-204ENST00000504309 FANCD2Q9BXW9 1451 aa27.88■■■□□ 2.05
SDHA-204ENST00000504309 FGD5Q6ZNL6 1462 aa27.86■■■□□ 2.05
SDHA-204ENST00000504309 TTBK1Q5TCY1 1321 aaPredicted RBP27.85■■■□□ 2.05
SDHA-204ENST00000504309 VPS8Q8N3P4 1428 aa27.84■■■□□ 2.05
SDHA-204ENST00000504309 NESP48681 1621 aa27.82■■■□□ 2.04
SDHA-204ENST00000504309 CUX2O14529 1486 aa27.79■■■□□ 2.04
SDHA-204ENST00000504309 ZEB1P37275 1124 aaPredicted RBP27.77■■■□□ 2.04
SDHA-204ENST00000504309 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
SDHA-204ENST00000504309 LAMC3Q9Y6N6 1575 aa27.74■■■□□ 2.03
SDHA-204ENST00000504309 RANGAP1P46060 587 aaPredicted RBP27.72■■■□□ 2.03
SDHA-204ENST00000504309 ARAP1Q96P48 1450 aa27.68■■■□□ 2.02
SDHA-204ENST00000504309 TOPBP1Q92547 1522 aa27.67■■■□□ 2.02
SDHA-204ENST00000504309 IGF1RP08069 1367 aa27.65■■■□□ 2.02
SDHA-204ENST00000504309 POLA1P09884 1462 aaPredicted RBP27.61■■■□□ 2.01
SDHA-204ENST00000504309 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
SDHA-204ENST00000504309 ABCA10Q8WWZ4 1543 aa27.56■■■□□ 2
SDHA-204ENST00000504309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.55■■■□□ 2
SDHA-204ENST00000504309 KIF21AQ7Z4S6 1674 aa27.55■■■□□ 2
SDHA-204ENST00000504309 WDR97A6NE52 1622 aa27.55■■■□□ 2
SDHA-204ENST00000504309 DNAJC5BQ9UF47 199 aa27.55■■■□□ 2
SDHA-204ENST00000504309 URB2Q14146 1524 aaKnown RBP27.54■■■□□ 2
SDHA-204ENST00000504309 ARHGAP35Q9NRY4 1499 aa27.52■■■□□ 2
SDHA-204ENST00000504309 CARMIL1Q5VZK9 1371 aa27.52■■■□□ 2
SDHA-204ENST00000504309 APLP2Q06481 763 aa27.49■■□□□ 1.99
SDHA-204ENST00000504309 CCER1Q8TC90 406 aaPredicted RBP27.45■■□□□ 1.98
SDHA-204ENST00000504309 PDS5BQ9NTI5 1447 aa27.43■■□□□ 1.98
SDHA-204ENST00000504309 CUL7Q14999 1698 aa27.43■■□□□ 1.98
SDHA-204ENST00000504309 ABCA5Q8WWZ7 1642 aa27.37■■□□□ 1.97
SDHA-204ENST00000504309 CTTNBP2Q8WZ74 1663 aa27.35■■□□□ 1.97
SDHA-204ENST00000504309 KANK4Q5T7N3 995 aaPredicted RBP27.26■■□□□ 1.95
SDHA-204ENST00000504309 TARBP1Q13395 1621 aaKnown RBP27.24■■□□□ 1.95
SDHA-204ENST00000504309 HNRNPUL2Q1KMD3 747 aaKnown RBP27.24■■□□□ 1.95
SDHA-204ENST00000504309 GAPVD1Q14C86 1478 aa27.2■■□□□ 1.94
SDHA-204ENST00000504309 TIAM1Q13009 1591 aa27.2■■□□□ 1.94
SDHA-204ENST00000504309 TDRD9Q8NDG6 1382 aaKnown RBP27.2■■□□□ 1.94
SDHA-204ENST00000504309 PCF11O94913 1555 aaKnown RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms