RNA–Protein interactions for RNA: ENST00000377265.3

MALRD1-201, Transcript of MAM and LDL receptor class A domain containing 1, humanhuman

TSL 2

Gene MALRD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALRD1-201ENST00000377265 NISCHQ9Y2I1 1504 aa16.62■□□□□ 0.25
MALRD1-201ENST00000377265 CCDC180Q9P1Z9 1646 aa14.85□□□□□ -0.03
MALRD1-201ENST00000377265 ABCC9O60706 1549 aa14.56□□□□□ -0.08
MALRD1-201ENST00000377265 RB1CC1Q8TDY2 1594 aa13.97□□□□□ -0.17
MALRD1-201ENST00000377265 NACADO15069 1562 aa13.92□□□□□ -0.18
MALRD1-201ENST00000377265 DCAF8L2P0C7V8 631 aa13.88□□□□□ -0.19
MALRD1-201ENST00000377265 ZCCHC6Q5VYS8 1495 aaKnown RBP13.86□□□□□ -0.19
MALRD1-201ENST00000377265 MYO15BQ96JP2 1530 aa13.78□□□□□ -0.2
MALRD1-201ENST00000377265 UNC13AQ9UPW8 1703 aa13.75□□□□□ -0.21
MALRD1-201ENST00000377265 DCAF1Q9Y4B6 1507 aa13.72□□□□□ -0.21
MALRD1-201ENST00000377265 BICRAQ9NZM4 1560 aa13.57□□□□□ -0.24
MALRD1-201ENST00000377265 SCRIBQ14160 1630 aa13.57□□□□□ -0.24
MALRD1-201ENST00000377265 PABPN1Q86U42 306 aaKnown RBP eCLIP13.56□□□□□ -0.24
MALRD1-201ENST00000377265 DNAJC5BQ9UF47 199 aa13.36□□□□□ -0.27
MALRD1-201ENST00000377265 SHROOM4Q9ULL8 1493 aa13.36□□□□□ -0.27
MALRD1-201ENST00000377265 EIF4G1Q04637 1599 aaKnown RBP13.21□□□□□ -0.29
MALRD1-201ENST00000377265 CC2D2AQ9P2K1 1620 aa13.18□□□□□ -0.3
MALRD1-201ENST00000377265 CECR2Q9BXF3 1484 aa13.06□□□□□ -0.32
MALRD1-201ENST00000377265 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
MALRD1-201ENST00000377265 BAZ1AQ9NRL2 1556 aaPredicted RBP12.9□□□□□ -0.34
MALRD1-201ENST00000377265 ATAD2BQ9ULI0 1458 aa12.85□□□□□ -0.35
MALRD1-201ENST00000377265 SMARCA2P51531 1590 aa12.83□□□□□ -0.36
MALRD1-201ENST00000377265 MROH2BQ7Z745 1585 aa12.83□□□□□ -0.36
MALRD1-201ENST00000377265 NCAPD3P42695 1498 aa12.81□□□□□ -0.36
MALRD1-201ENST00000377265 HMGXB3Q12766 1538 aa12.8□□□□□ -0.36
MALRD1-201ENST00000377265 PEG3Q9GZU2 1588 aa12.79□□□□□ -0.36
MALRD1-201ENST00000377265 BAZ1BQ9UIG0 1483 aaKnown RBP12.75□□□□□ -0.37
MALRD1-201ENST00000377265 WIZO95785 1651 aa12.73□□□□□ -0.37
MALRD1-201ENST00000377265 RSF1Q96T23 1441 aaPredicted RBP12.63□□□□□ -0.39
MALRD1-201ENST00000377265 AEBP2Q6ZN18 517 aaPredicted RBP12.6□□□□□ -0.39
MALRD1-201ENST00000377265 NESP48681 1621 aa12.6□□□□□ -0.39
MALRD1-201ENST00000377265 TOP2AP11388 1531 aaKnown RBP12.56□□□□□ -0.4
MALRD1-201ENST00000377265 ERCC6Q03468 1493 aa12.54□□□□□ -0.4
MALRD1-201ENST00000377265 LAMC3Q9Y6N6 1575 aa12.53□□□□□ -0.4
MALRD1-201ENST00000377265 KIF21AQ7Z4S6 1674 aa12.5□□□□□ -0.41
MALRD1-201ENST00000377265 THOC2Q8NI27 1593 aaKnown RBP12.44□□□□□ -0.42
MALRD1-201ENST00000377265 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
MALRD1-201ENST00000377265 PDS5BQ9NTI5 1447 aa12.4□□□□□ -0.42
MALRD1-201ENST00000377265 CUX2O14529 1486 aa12.4□□□□□ -0.42
MALRD1-201ENST00000377265 PRDM2Q13029 1718 aa12.39□□□□□ -0.43
MALRD1-201ENST00000377265 CCDC88BA6NC98 1476 aa12.38□□□□□ -0.43
MALRD1-201ENST00000377265 CFTRP13569 1480 aa12.37□□□□□ -0.43
MALRD1-201ENST00000377265 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
MALRD1-201ENST00000377265 CEP164Q9UPV0 1460 aa12.34□□□□□ -0.43
MALRD1-201ENST00000377265 MRC2Q9UBG0 1479 aa12.32□□□□□ -0.44
MALRD1-201ENST00000377265 WDR62O43379 1518 aa12.29□□□□□ -0.44
MALRD1-201ENST00000377265 SUPT5HO00267 1087 aaKnown RBP12.28□□□□□ -0.44
MALRD1-201ENST00000377265 URB2Q14146 1524 aaKnown RBP12.23□□□□□ -0.45
MALRD1-201ENST00000377265 TOPBP1Q92547 1522 aa12.14□□□□□ -0.47
MALRD1-201ENST00000377265 DNMBPQ6XZF7 1577 aa12.14□□□□□ -0.47
MALRD1-201ENST00000377265 ABCC8Q09428 1581 aa12.08□□□□□ -0.48
MALRD1-201ENST00000377265 CUX1P39880 1505 aa12.05□□□□□ -0.48
MALRD1-201ENST00000377265 IFT140Q96RY7 1462 aa12.05□□□□□ -0.48
MALRD1-201ENST00000377265 ZNF608Q9ULD9 1512 aaPredicted RBP12.04□□□□□ -0.48
MALRD1-201ENST00000377265 POLA1P09884 1462 aaPredicted RBP12.04□□□□□ -0.48
MALRD1-201ENST00000377265 TARBP1Q13395 1621 aaKnown RBP12.04□□□□□ -0.48
MALRD1-201ENST00000377265 EIF4G3O43432 1585 aaKnown RBP12.04□□□□□ -0.48
MALRD1-201ENST00000377265 DNAJC5Q9H3Z4 198 aa12.02□□□□□ -0.48
MALRD1-201ENST00000377265 FGD5Q6ZNL6 1462 aa12.01□□□□□ -0.49
MALRD1-201ENST00000377265 CHIC1Q5VXU3 224 aa12□□□□□ -0.49
MALRD1-201ENST00000377265 RAD54L2Q9Y4B4 1467 aa11.99□□□□□ -0.49
MALRD1-201ENST00000377265 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
MALRD1-201ENST00000377265 SYNJ1O43426 1573 aa11.95□□□□□ -0.5
MALRD1-201ENST00000377265 BIVM-ERCC5R4GMW8 1640 aa11.95□□□□□ -0.5
MALRD1-201ENST00000377265 SOGA1O94964 1423 aa11.95□□□□□ -0.5
MALRD1-201ENST00000377265 AQRO60306 1485 aaKnown RBP eCLIP11.95□□□□□ -0.5
MALRD1-201ENST00000377265 TOP2BQ02880 1626 aa11.93□□□□□ -0.5
MALRD1-201ENST00000377265 WRNQ14191 1432 aaPredicted RBP eCLIP11.92□□□□□ -0.5
MALRD1-201ENST00000377265 CHD1O14646 1710 aa11.91□□□□□ -0.5
MALRD1-201ENST00000377265 TDRD9Q8NDG6 1382 aaKnown RBP11.9□□□□□ -0.5
MALRD1-201ENST00000377265 PBRM1Q86U86 1689 aa11.9□□□□□ -0.5
MALRD1-201ENST00000377265 ABCA5Q8WWZ7 1642 aa11.88□□□□□ -0.51
MALRD1-201ENST00000377265 ABCA10Q8WWZ4 1543 aa11.86□□□□□ -0.51
MALRD1-201ENST00000377265 SNAPC4Q5SXM2 1469 aa11.86□□□□□ -0.51
MALRD1-201ENST00000377265 GRIN2BQ13224 1484 aa11.83□□□□□ -0.52
MALRD1-201ENST00000377265 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
MALRD1-201ENST00000377265 OSCARQ8IYS5 282 aa11.82□□□□□ -0.52
MALRD1-201ENST00000377265 MAGI1Q96QZ7 1491 aaPredicted RBP11.81□□□□□ -0.52
MALRD1-201ENST00000377265 FBLN2P98095 1184 aa11.8□□□□□ -0.52
MALRD1-201ENST00000377265 SYNJ2O15056 1496 aa11.77□□□□□ -0.53
MALRD1-201ENST00000377265 ADAMTS12P58397 1594 aa11.76□□□□□ -0.53
MALRD1-201ENST00000377265 RIMBP3CA6NJZ7 1639 aa11.76□□□□□ -0.53
MALRD1-201ENST00000377265 RIMBP3BA6NNM3 1639 aa11.76□□□□□ -0.53
MALRD1-201ENST00000377265 RIMBP3Q9UFD9 1639 aa11.76□□□□□ -0.53
MALRD1-201ENST00000377265 ARHGEF11O15085 1522 aa11.73□□□□□ -0.53
MALRD1-201ENST00000377265 ERICH3Q5RHP9 1530 aa11.73□□□□□ -0.53
MALRD1-201ENST00000377265 CLASP1Q7Z460 1538 aa11.72□□□□□ -0.53
MALRD1-201ENST00000377265 CHMP7Q8WUX9 453 aaPredicted RBP11.72□□□□□ -0.53
MALRD1-201ENST00000377265 GRIN2AQ12879 1464 aa11.7□□□□□ -0.54
MALRD1-201ENST00000377265 TRIM41Q8WV44 630 aa11.68□□□□□ -0.54
MALRD1-201ENST00000377265 CEP170Q5SW79 1584 aa11.68□□□□□ -0.54
MALRD1-201ENST00000377265 FHAD1B1AJZ9 1412 aa11.67□□□□□ -0.54
MALRD1-201ENST00000377265 KIF27Q86VH2 1401 aa11.65□□□□□ -0.54
MALRD1-201ENST00000377265 CUL7Q14999 1698 aa11.65□□□□□ -0.55
MALRD1-201ENST00000377265 ARAP1Q96P48 1450 aa11.63□□□□□ -0.55
MALRD1-201ENST00000377265 NUP160Q12769 1436 aa11.63□□□□□ -0.55
MALRD1-201ENST00000377265 RUSC2Q8N2Y8 1516 aa11.61□□□□□ -0.55
MALRD1-201ENST00000377265 IGF1RP08069 1367 aa11.59□□□□□ -0.55
MALRD1-201ENST00000377265 ERCC6L2Q5T890 1561 aa11.59□□□□□ -0.55
MALRD1-201ENST00000377265 SHROOM2Q13796 1616 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms