RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 AEBP2Q6ZN18 517 aaPredicted RBP15.6■□□□□ 0.09
FXN-205ENST00000498653 CHIC1Q5VXU3 224 aa15.39■□□□□ 0.05
FXN-205ENST00000498653 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
FXN-205ENST00000498653 ABCC9O60706 1549 aa14.64□□□□□ -0.07
FXN-205ENST00000498653 DNAJC5Q9H3Z4 198 aa14.48□□□□□ -0.09
FXN-205ENST00000498653 NISCHQ9Y2I1 1504 aa14.38□□□□□ -0.11
FXN-205ENST00000498653 CCDC180Q9P1Z9 1646 aa13.52□□□□□ -0.25
FXN-205ENST00000498653 PHF23Q9BUL5 403 aaPredicted RBP13.45□□□□□ -0.26
FXN-205ENST00000498653 RB1CC1Q8TDY2 1594 aa13.4□□□□□ -0.26
FXN-205ENST00000498653 SENP3Q9H4L4 574 aaPredicted RBP13.38□□□□□ -0.27
FXN-205ENST00000498653 PABPN1Q86U42 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
FXN-205ENST00000498653 CECR2Q9BXF3 1484 aa13.31□□□□□ -0.28
FXN-205ENST00000498653 TRIM41Q8WV44 630 aa13.26□□□□□ -0.29
FXN-205ENST00000498653 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
FXN-205ENST00000498653 CC2D2AQ9P2K1 1620 aa13.22□□□□□ -0.29
FXN-205ENST00000498653 BICRAQ9NZM4 1560 aa13.17□□□□□ -0.3
FXN-205ENST00000498653 CUX2O14529 1486 aa13.16□□□□□ -0.3
FXN-205ENST00000498653 NACADO15069 1562 aa13□□□□□ -0.33
FXN-205ENST00000498653 EIF4G1Q04637 1599 aaKnown RBP12.89□□□□□ -0.35
FXN-205ENST00000498653 SHROOM4Q9ULL8 1493 aa12.79□□□□□ -0.36
FXN-205ENST00000498653 ERCC6Q03468 1493 aa12.67□□□□□ -0.38
FXN-205ENST00000498653 ILDR1Q86SU0 546 aaPredicted RBP12.62□□□□□ -0.39
FXN-205ENST00000498653 PLPPR3Q6T4P5 718 aa12.58□□□□□ -0.4
FXN-205ENST00000498653 THOC2Q8NI27 1593 aaKnown RBP12.48□□□□□ -0.41
FXN-205ENST00000498653 MYO15BQ96JP2 1530 aa12.44□□□□□ -0.42
FXN-205ENST00000498653 DCAF8L2P0C7V8 631 aa12.4□□□□□ -0.42
FXN-205ENST00000498653 RIMBP3CA6NJZ7 1639 aa12.37□□□□□ -0.43
FXN-205ENST00000498653 RIMBP3BA6NNM3 1639 aa12.37□□□□□ -0.43
FXN-205ENST00000498653 RIMBP3Q9UFD9 1639 aa12.37□□□□□ -0.43
FXN-205ENST00000498653 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
FXN-205ENST00000498653 FOXD1Q16676 465 aa12.31□□□□□ -0.44
FXN-205ENST00000498653 NESP48681 1621 aa12.26□□□□□ -0.45
FXN-205ENST00000498653 SCRIBQ14160 1630 aa12.22□□□□□ -0.45
FXN-205ENST00000498653 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
FXN-205ENST00000498653 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
FXN-205ENST00000498653 ARHGEF11O15085 1522 aa12.17□□□□□ -0.46
FXN-205ENST00000498653 OSCARQ8IYS5 282 aa12.17□□□□□ -0.46
FXN-205ENST00000498653 KIF21AQ7Z4S6 1674 aa12.13□□□□□ -0.47
FXN-205ENST00000498653 NCAPD3P42695 1498 aa12.01□□□□□ -0.49
FXN-205ENST00000498653 ARAP1Q96P48 1450 aa11.99□□□□□ -0.49
FXN-205ENST00000498653 CYB5RLQ6IPT4 315 aa11.98□□□□□ -0.49
FXN-205ENST00000498653 WDR62O43379 1518 aa11.96□□□□□ -0.49
FXN-205ENST00000498653 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.5
FXN-205ENST00000498653 LMTK3Q96Q04 1460 aa11.89□□□□□ -0.51
FXN-205ENST00000498653 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
FXN-205ENST00000498653 ADRA2BP18089 450 aa11.87□□□□□ -0.51
FXN-205ENST00000498653 HMGXB3Q12766 1538 aa11.86□□□□□ -0.51
FXN-205ENST00000498653 PPP6R1Q9UPN7 881 aa11.84□□□□□ -0.51
FXN-205ENST00000498653 PDS5BQ9NTI5 1447 aa11.84□□□□□ -0.51
FXN-205ENST00000498653 SOCS7O14512 581 aa11.83□□□□□ -0.52
FXN-205ENST00000498653 DCAF1Q9Y4B6 1507 aa11.82□□□□□ -0.52
FXN-205ENST00000498653 ATAD2BQ9ULI0 1458 aa11.81□□□□□ -0.52
FXN-205ENST00000498653 ERCC6L2Q5T890 1561 aa11.79□□□□□ -0.52
FXN-205ENST00000498653 ILDR2Q71H61 639 aa11.75□□□□□ -0.53
FXN-205ENST00000498653 FBXO41Q8TF61 875 aa11.75□□□□□ -0.53
FXN-205ENST00000498653 KDM4FA0A1W2PPD8 638 aa11.74□□□□□ -0.53
FXN-205ENST00000498653 ZCCHC6Q5VYS8 1495 aaKnown RBP11.7□□□□□ -0.54
FXN-205ENST00000498653 PIAS4Q8N2W9 510 aaPredicted RBP11.69□□□□□ -0.54
FXN-205ENST00000498653 HECW2Q9P2P5 1572 aa11.69□□□□□ -0.54
FXN-205ENST00000498653 RSF1Q96T23 1441 aaPredicted RBP11.68□□□□□ -0.54
FXN-205ENST00000498653 CHD1O14646 1710 aa11.62□□□□□ -0.55
FXN-205ENST00000498653 SMARCA4P51532 1647 aa11.61□□□□□ -0.55
FXN-205ENST00000498653 BAZ1BQ9UIG0 1483 aaKnown RBP11.59□□□□□ -0.55
FXN-205ENST00000498653 CEP164Q9UPV0 1460 aa11.57□□□□□ -0.56
FXN-205ENST00000498653 ZNF608Q9ULD9 1512 aaPredicted RBP11.55□□□□□ -0.56
FXN-205ENST00000498653 KIF13AQ9H1H9 1805 aa11.53□□□□□ -0.56
FXN-205ENST00000498653 CADPSQ9ULU8 1353 aa11.53□□□□□ -0.56
FXN-205ENST00000498653 DISP3Q9P2K9 1392 aa11.5□□□□□ -0.57
FXN-205ENST00000498653 URB2Q14146 1524 aaKnown RBP11.5□□□□□ -0.57
FXN-205ENST00000498653 EIF4G3O43432 1585 aaKnown RBP11.46□□□□□ -0.57
FXN-205ENST00000498653 SYNJ2O15056 1496 aa11.46□□□□□ -0.57
FXN-205ENST00000498653 CLASP1Q7Z460 1538 aa11.45□□□□□ -0.58
FXN-205ENST00000498653 PEG3Q9GZU2 1588 aa11.45□□□□□ -0.58
FXN-205ENST00000498653 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
FXN-205ENST00000498653 MSH5O43196 834 aa11.44□□□□□ -0.58
FXN-205ENST00000498653 SPATA31D1Q6ZQQ2 1576 aa11.41□□□□□ -0.58
FXN-205ENST00000498653 ADGRL1O94910 1474 aa11.4□□□□□ -0.58
FXN-205ENST00000498653 IFT140Q96RY7 1462 aa11.38□□□□□ -0.59
FXN-205ENST00000498653 KDM6BO15054 1643 aa11.36□□□□□ -0.59
FXN-205ENST00000498653 GAPVD1Q14C86 1478 aa11.34□□□□□ -0.59
FXN-205ENST00000498653 POTEDQ86YR6 584 aa11.25□□□□□ -0.61
FXN-205ENST00000498653 SYNJ1O43426 1573 aa11.24□□□□□ -0.61
FXN-205ENST00000498653 FBLN2P98095 1184 aa11.23□□□□□ -0.61
FXN-205ENST00000498653 AQRO60306 1485 aaKnown RBP eCLIP11.21□□□□□ -0.61
FXN-205ENST00000498653 CFTRP13569 1480 aa11.19□□□□□ -0.62
FXN-205ENST00000498653 DIP2BQ9P265 1576 aa11.19□□□□□ -0.62
FXN-205ENST00000498653 TARBP1Q13395 1621 aaKnown RBP11.18□□□□□ -0.62
FXN-205ENST00000498653 ABCC10Q5T3U5 1492 aa11.18□□□□□ -0.62
FXN-205ENST00000498653 TOPBP1Q92547 1522 aa11.12□□□□□ -0.63
FXN-205ENST00000498653 TSPOAP1O95153 1857 aa11.12□□□□□ -0.63
FXN-205ENST00000498653 SNAPC4Q5SXM2 1469 aa11.11□□□□□ -0.63
FXN-205ENST00000498653 MROH2BQ7Z745 1585 aa11.09□□□□□ -0.63
FXN-205ENST00000498653 FAM69CQ0P6D2 419 aa11.09□□□□□ -0.63
FXN-205ENST00000498653 PRDM2Q13029 1718 aa11.09□□□□□ -0.63
FXN-205ENST00000498653 MAPKBP1O60336 1514 aa11.06□□□□□ -0.64
FXN-205ENST00000498653 PPP4R3CPQ6ZMV5 832 aa11.05□□□□□ -0.64
FXN-205ENST00000498653 SCAF1Q9H7N4 1312 aaKnown RBP11.03□□□□□ -0.64
FXN-205ENST00000498653 TOP2BQ02880 1626 aa11.02□□□□□ -0.64
FXN-205ENST00000498653 CERKQ8TCT0 537 aa11.01□□□□□ -0.65
FXN-205ENST00000498653 MAGI1Q96QZ7 1491 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms