RNA–Protein interactions for RNA: ENST00000382079.3

C1QTNF3-AMACR-201, Transcript of C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene C1QTNF3-AMACR, Length 3,424 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACR-201ENST00000382079 NISCHQ9Y2I1 1504 aa19.47■□□□□ 0.71
C1QTNF3-AMACR-201ENST00000382079 SHROOM4Q9ULL8 1493 aa16.78■□□□□ 0.28
C1QTNF3-AMACR-201ENST00000382079 SUPT5HO00267 1087 aaKnown RBP16.61■□□□□ 0.25
C1QTNF3-AMACR-201ENST00000382079 ZCCHC6Q5VYS8 1495 aaKnown RBP16.49■□□□□ 0.23
C1QTNF3-AMACR-201ENST00000382079 CCDC180Q9P1Z9 1646 aa16.41■□□□□ 0.22
C1QTNF3-AMACR-201ENST00000382079 DCAF8L2P0C7V8 631 aa16.23■□□□□ 0.19
C1QTNF3-AMACR-201ENST00000382079 CHIC1Q5VXU3 224 aa16.22■□□□□ 0.19
C1QTNF3-AMACR-201ENST00000382079 HRCP23327 699 aa16.09■□□□□ 0.17
C1QTNF3-AMACR-201ENST00000382079 MYO15BQ96JP2 1530 aa16.07■□□□□ 0.16
C1QTNF3-AMACR-201ENST00000382079 DCAF1Q9Y4B6 1507 aa15.99■□□□□ 0.15
C1QTNF3-AMACR-201ENST00000382079 PCGF6Q9BYE7 350 aa15.94■□□□□ 0.14
C1QTNF3-AMACR-201ENST00000382079 LOC105371045A0A1W2PR82 267 aa15.72■□□□□ 0.11
C1QTNF3-AMACR-201ENST00000382079 TRIM26Q12899 539 aaPredicted RBP15.64■□□□□ 0.09
C1QTNF3-AMACR-201ENST00000382079 PPARGC1BQ86YN6 1023 aaKnown RBP15.64■□□□□ 0.09
C1QTNF3-AMACR-201ENST00000382079 ABCC9O60706 1549 aa15.57■□□□□ 0.08
C1QTNF3-AMACR-201ENST00000382079 RSF1Q96T23 1441 aaPredicted RBP15.5■□□□□ 0.07
C1QTNF3-AMACR-201ENST00000382079 TRIM41Q8WV44 630 aa15.5■□□□□ 0.07
C1QTNF3-AMACR-201ENST00000382079 ZEB1P37275 1124 aaPredicted RBP15.48■□□□□ 0.07
C1QTNF3-AMACR-201ENST00000382079 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
C1QTNF3-AMACR-201ENST00000382079 RB1CC1Q8TDY2 1594 aa15.35■□□□□ 0.05
C1QTNF3-AMACR-201ENST00000382079 FAM9AQ8IZU1 332 aaPredicted RBP15.34■□□□□ 0.05
C1QTNF3-AMACR-201ENST00000382079 NACADO15069 1562 aa15.2■□□□□ 0.02
C1QTNF3-AMACR-201ENST00000382079 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
C1QTNF3-AMACR-201ENST00000382079 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
C1QTNF3-AMACR-201ENST00000382079 MROH2BQ7Z745 1585 aa15.12■□□□□ 0.01
C1QTNF3-AMACR-201ENST00000382079 PELP1Q8IZL8 1130 aaKnown RBP15.03■□□□□ -0
C1QTNF3-AMACR-201ENST00000382079 WIZO95785 1651 aa15□□□□□ -0.01
C1QTNF3-AMACR-201ENST00000382079 CCER1Q8TC90 406 aaPredicted RBP14.98□□□□□ -0.01
C1QTNF3-AMACR-201ENST00000382079 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
C1QTNF3-AMACR-201ENST00000382079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
C1QTNF3-AMACR-201ENST00000382079 SCAF1Q9H7N4 1312 aaKnown RBP14.89□□□□□ -0.03
C1QTNF3-AMACR-201ENST00000382079 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
C1QTNF3-AMACR-201ENST00000382079 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
C1QTNF3-AMACR-201ENST00000382079 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.04
C1QTNF3-AMACR-201ENST00000382079 CCDC88BA6NC98 1476 aa14.8□□□□□ -0.04
C1QTNF3-AMACR-201ENST00000382079 EEA1Q15075 1411 aa14.79□□□□□ -0.04
C1QTNF3-AMACR-201ENST00000382079 CEP162Q5TB80 1403 aa14.79□□□□□ -0.04
C1QTNF3-AMACR-201ENST00000382079 TNIKQ9UKE5 1360 aa14.79□□□□□ -0.04
C1QTNF3-AMACR-201ENST00000382079 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.05
C1QTNF3-AMACR-201ENST00000382079 ACIN1Q9UKV3 1341 aaKnown RBP14.77□□□□□ -0.05
C1QTNF3-AMACR-201ENST00000382079 DIEXFQ68CQ4 756 aaKnown RBP14.76□□□□□ -0.05
C1QTNF3-AMACR-201ENST00000382079 ABCC8Q09428 1581 aa14.76□□□□□ -0.05
C1QTNF3-AMACR-201ENST00000382079 CENPBP07199 599 aaPredicted RBP14.76□□□□□ -0.05
C1QTNF3-AMACR-201ENST00000382079 UBTFP17480 764 aaKnown RBP14.76□□□□□ -0.05
C1QTNF3-AMACR-201ENST00000382079 TTBK1Q5TCY1 1321 aaPredicted RBP14.75□□□□□ -0.05
C1QTNF3-AMACR-201ENST00000382079 SMARCA4P51532 1647 aa14.75□□□□□ -0.05
C1QTNF3-AMACR-201ENST00000382079 SMARCA2P51531 1590 aa14.73□□□□□ -0.05
C1QTNF3-AMACR-201ENST00000382079 SOGA1O94964 1423 aa14.72□□□□□ -0.05
C1QTNF3-AMACR-201ENST00000382079 NEUROD1Q13562 356 aa14.67□□□□□ -0.06
C1QTNF3-AMACR-201ENST00000382079 GOLGA3Q08378 1498 aa14.65□□□□□ -0.06
C1QTNF3-AMACR-201ENST00000382079 ZNF316A6NFI3 1004 aaPredicted RBP14.62□□□□□ -0.07
C1QTNF3-AMACR-201ENST00000382079 RUSC2Q8N2Y8 1516 aa14.59□□□□□ -0.07
C1QTNF3-AMACR-201ENST00000382079 GTF3C3Q9Y5Q9 886 aa14.59□□□□□ -0.07
C1QTNF3-AMACR-201ENST00000382079 APLP2Q06481 763 aa14.56□□□□□ -0.08
C1QTNF3-AMACR-201ENST00000382079 CEP164Q9UPV0 1460 aa14.55□□□□□ -0.08
C1QTNF3-AMACR-201ENST00000382079 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
C1QTNF3-AMACR-201ENST00000382079 HNRNPUL2Q1KMD3 747 aaKnown RBP14.51□□□□□ -0.09
C1QTNF3-AMACR-201ENST00000382079 CLIP1P30622 1438 aa14.51□□□□□ -0.09
C1QTNF3-AMACR-201ENST00000382079 UNC13AQ9UPW8 1703 aa14.48□□□□□ -0.09
C1QTNF3-AMACR-201ENST00000382079 KIF21BO75037 1637 aa14.46□□□□□ -0.09
C1QTNF3-AMACR-201ENST00000382079 PEG3Q9GZU2 1588 aa14.45□□□□□ -0.1
C1QTNF3-AMACR-201ENST00000382079 VPS8Q8N3P4 1428 aa14.45□□□□□ -0.1
C1QTNF3-AMACR-201ENST00000382079 BAZ1BQ9UIG0 1483 aaKnown RBP14.43□□□□□ -0.1
C1QTNF3-AMACR-201ENST00000382079 YTHDC1Q96MU7 727 aaKnown RBP14.41□□□□□ -0.1
C1QTNF3-AMACR-201ENST00000382079 SYNJ1O43426 1573 aa14.41□□□□□ -0.1
C1QTNF3-AMACR-201ENST00000382079 BICRAQ9NZM4 1560 aa14.4□□□□□ -0.1
C1QTNF3-AMACR-201ENST00000382079 ATAD2BQ9ULI0 1458 aa14.38□□□□□ -0.11
C1QTNF3-AMACR-201ENST00000382079 MYT1Q01538 1121 aa14.37□□□□□ -0.11
C1QTNF3-AMACR-201ENST00000382079 MIER1Q8N108 512 aa14.37□□□□□ -0.11
C1QTNF3-AMACR-201ENST00000382079 RANGAP1P46060 587 aaPredicted RBP14.36□□□□□ -0.11
C1QTNF3-AMACR-201ENST00000382079 RAPGEF2Q9Y4G8 1499 aa14.35□□□□□ -0.11
C1QTNF3-AMACR-201ENST00000382079 CLSPNQ9HAW4 1339 aa14.33□□□□□ -0.12
C1QTNF3-AMACR-201ENST00000382079 TOP2BQ02880 1626 aa14.24□□□□□ -0.13
C1QTNF3-AMACR-201ENST00000382079 ERICH3Q5RHP9 1530 aa14.22□□□□□ -0.13
C1QTNF3-AMACR-201ENST00000382079 PRXQ9BXM0 1461 aa14.2□□□□□ -0.14
C1QTNF3-AMACR-201ENST00000382079 DHX57Q6P158 1386 aaKnown RBP14.2□□□□□ -0.14
C1QTNF3-AMACR-201ENST00000382079 KIF27Q86VH2 1401 aa14.17□□□□□ -0.14
C1QTNF3-AMACR-201ENST00000382079 ARAP1Q96P48 1450 aa14.16□□□□□ -0.14
C1QTNF3-AMACR-201ENST00000382079 BIVM-ERCC5R4GMW8 1640 aa14.16□□□□□ -0.14
C1QTNF3-AMACR-201ENST00000382079 KANK4Q5T7N3 995 aaPredicted RBP14.16□□□□□ -0.14
C1QTNF3-AMACR-201ENST00000382079 RRBP1Q9P2E9 1410 aaKnown RBP14.12□□□□□ -0.15
C1QTNF3-AMACR-201ENST00000382079 CCNB3Q8WWL7 1395 aa14.1□□□□□ -0.15
C1QTNF3-AMACR-201ENST00000382079 NCAPD3P42695 1498 aa14.08□□□□□ -0.15
C1QTNF3-AMACR-201ENST00000382079 CUX1P39880 1505 aa14.06□□□□□ -0.16
C1QTNF3-AMACR-201ENST00000382079 HMGXB3Q12766 1538 aa14.06□□□□□ -0.16
C1QTNF3-AMACR-201ENST00000382079 ITGAEP38570 1179 aa14.06□□□□□ -0.16
C1QTNF3-AMACR-201ENST00000382079 CUX2O14529 1486 aa14.06□□□□□ -0.16
C1QTNF3-AMACR-201ENST00000382079 ARHGAP35Q9NRY4 1499 aa14.02□□□□□ -0.16
C1QTNF3-AMACR-201ENST00000382079 CFTRP13569 1480 aa14.01□□□□□ -0.17
C1QTNF3-AMACR-201ENST00000382079 SUPT16HQ9Y5B9 1047 aaKnown RBP13.99□□□□□ -0.17
C1QTNF3-AMACR-201ENST00000382079 RAB3GAP2Q9H2M9 1393 aa13.97□□□□□ -0.17
C1QTNF3-AMACR-201ENST00000382079 IGF1RP08069 1367 aa13.95□□□□□ -0.18
C1QTNF3-AMACR-201ENST00000382079 MAP3K1Q13233 1512 aa13.95□□□□□ -0.18
C1QTNF3-AMACR-201ENST00000382079 SETD5Q9C0A6 1442 aa13.94□□□□□ -0.18
C1QTNF3-AMACR-201ENST00000382079 CARMIL1Q5VZK9 1371 aa13.93□□□□□ -0.18
C1QTNF3-AMACR-201ENST00000382079 FAM50AQ14320 339 aaKnown RBP13.92□□□□□ -0.18
C1QTNF3-AMACR-201ENST00000382079 TIMELESSQ9UNS1 1208 aa13.9□□□□□ -0.18
C1QTNF3-AMACR-201ENST00000382079 FHAD1B1AJZ9 1412 aa13.9□□□□□ -0.18
C1QTNF3-AMACR-201ENST00000382079 TIAM1Q13009 1591 aa13.9□□□□□ -0.18
C1QTNF3-AMACR-201ENST00000382079 LRRC9Q6ZRR7 1453 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms