RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 AEBP2Q6ZN18 517 aaPredicted RBP12.39□□□□□ -0.43
FXN-204ENST00000484259 CHIC1Q5VXU3 224 aa11.63□□□□□ -0.55
FXN-204ENST00000484259 SENP3Q9H4L4 574 aaPredicted RBP10.71□□□□□ -0.69
FXN-204ENST00000484259 PHF23Q9BUL5 403 aaPredicted RBP10.47□□□□□ -0.73
FXN-204ENST00000484259 POTEDQ86YR6 584 aa10.29□□□□□ -0.76
FXN-204ENST00000484259 FOXD1Q16676 465 aa10.01□□□□□ -0.81
FXN-204ENST00000484259 MSH5O43196 834 aa9.63□□□□□ -0.87
FXN-204ENST00000484259 PIAS4Q8N2W9 510 aaPredicted RBP9.26□□□□□ -0.93
FXN-204ENST00000484259 PPP6R1Q9UPN7 881 aa8.93□□□□□ -0.98
FXN-204ENST00000484259 ADRA2BP18089 450 aa8.88□□□□□ -0.99
FXN-204ENST00000484259 PLPPR3Q6T4P5 718 aa8.78□□□□□ -1
FXN-204ENST00000484259 CACNB1Q02641 598 aaPredicted RBP8.6□□□□□ -1.03
FXN-204ENST00000484259 DMRT2Q9Y5R5 561 aa8.39□□□□□ -1.07
FXN-204ENST00000484259 MAPK8IP2Q13387 824 aaPredicted RBP8.31□□□□□ -1.08
FXN-204ENST00000484259 SCAF1Q9H7N4 1312 aaKnown RBP8.19□□□□□ -1.1
FXN-204ENST00000484259 RNF39Q9H2S5 420 aa8.13□□□□□ -1.11
FXN-204ENST00000484259 DCAF8L1A6NGE4 600 aa8.12□□□□□ -1.11
FXN-204ENST00000484259 C1QBPQ07021 282 aaKnown RBP8□□□□□ -1.13
FXN-204ENST00000484259 POTEHQ6S545 545 aa7.97□□□□□ -1.13
FXN-204ENST00000484259 HOXD11P31277 338 aaPredicted RBP7.86□□□□□ -1.15
FXN-204ENST00000484259 DNAJC5BQ9UF47 199 aa7.7□□□□□ -1.18
FXN-204ENST00000484259 RNF216Q9NWF9 866 aaPredicted RBP7.67□□□□□ -1.18
FXN-204ENST00000484259 PPP4R3CPQ6ZMV5 832 aa7.61□□□□□ -1.19
FXN-204ENST00000484259 CNKSR2Q8WXI2 1034 aa7.6□□□□□ -1.19
FXN-204ENST00000484259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.53□□□□□ -1.2
FXN-204ENST00000484259 DSG3P32926 999 aa7.43□□□□□ -1.22
FXN-204ENST00000484259 CAPN15O75808 1086 aa7.38□□□□□ -1.23
FXN-204ENST00000484259 SLC24A1O60721 1099 aa7.34□□□□□ -1.23
FXN-204ENST00000484259 SPINK5Q9NQ38 1064 aaPredicted RBP7.33□□□□□ -1.24
FXN-204ENST00000484259 U3KPZ7 1027 aaPredicted RBP7.26□□□□□ -1.25
FXN-204ENST00000484259 SP7Q8TDD2 431 aaPredicted RBP7.22□□□□□ -1.25
FXN-204ENST00000484259 NCBP3Q53F19 620 aaKnown RBP7.19□□□□□ -1.26
FXN-204ENST00000484259 CHRDL2Q6WN34 429 aa7.19□□□□□ -1.26
FXN-204ENST00000484259 ABCB7O75027 752 aa7.15□□□□□ -1.26
FXN-204ENST00000484259 RBM42Q9BTD8 480 aaKnown RBP7.15□□□□□ -1.26
FXN-204ENST00000484259 TRHP20396 242 aaPredicted RBP7.13□□□□□ -1.27
FXN-204ENST00000484259 ZNF219Q9P2Y4 722 aaPredicted RBP7.1□□□□□ -1.27
FXN-204ENST00000484259 APLP2Q06481 763 aa7.08□□□□□ -1.28
FXN-204ENST00000484259 NPM3O75607 178 aaKnown RBP7.03□□□□□ -1.28
FXN-204ENST00000484259 HAX1O00165 279 aa6.94□□□□□ -1.3
FXN-204ENST00000484259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.93□□□□□ -1.3
FXN-204ENST00000484259 HNRNPUL2Q1KMD3 747 aaKnown RBP6.93□□□□□ -1.3
FXN-204ENST00000484259 PIP4P2Q8N4L2 257 aa6.88□□□□□ -1.31
FXN-204ENST00000484259 SAMD1Q6SPF0 538 aaPredicted RBP6.85□□□□□ -1.31
FXN-204ENST00000484259 AKT1S1Q96B36 256 aa6.85□□□□□ -1.31
FXN-204ENST00000484259 SLC4A2P04920 1241 aa6.84□□□□□ -1.31
FXN-204ENST00000484259 EHMT2Q96KQ7 1210 aa6.84□□□□□ -1.31
FXN-204ENST00000484259 PLSCR2Q9NRY7 297 aa6.83□□□□□ -1.32
FXN-204ENST00000484259 POLA2Q14181 598 aa6.8□□□□□ -1.32
FXN-204ENST00000484259 LHX8Q68G74 356 aa6.77□□□□□ -1.33
FXN-204ENST00000484259 REM2Q8IYK8 340 aaPredicted RBP6.77□□□□□ -1.33
FXN-204ENST00000484259 EVX2Q03828 476 aa6.76□□□□□ -1.33
FXN-204ENST00000484259 FXR2P51116 673 aaKnown RBP eCLIP6.75□□□□□ -1.33
FXN-204ENST00000484259 PITPNM1O00562 1244 aa6.71□□□□□ -1.34
FXN-204ENST00000484259 DAXXQ9UER7 740 aaPredicted RBP6.69□□□□□ -1.34
FXN-204ENST00000484259 ZBTB12Q9Y330 459 aaPredicted RBP6.65□□□□□ -1.34
FXN-204ENST00000484259 AMER1Q5JTC6 1135 aaPredicted RBP6.64□□□□□ -1.35
FXN-204ENST00000484259 GABBR2O75899 941 aa6.6□□□□□ -1.35
FXN-204ENST00000484259 OSCARQ8IYS5 282 aa6.6□□□□□ -1.35
FXN-204ENST00000484259 RTN4Q9NQC3 1192 aaKnown RBP6.58□□□□□ -1.36
FXN-204ENST00000484259 C19orf67A6NJJ6 358 aa6.55□□□□□ -1.36
FXN-204ENST00000484259 MYCNP04198 464 aaPredicted RBP6.55□□□□□ -1.36
FXN-204ENST00000484259 PRKAR2AP13861 404 aaKnown RBP6.54□□□□□ -1.36
FXN-204ENST00000484259 TTBK1Q5TCY1 1321 aaPredicted RBP6.48□□□□□ -1.37
FXN-204ENST00000484259 CSRNP3Q8WYN3 585 aa6.43□□□□□ -1.38
FXN-204ENST00000484259 CLEC11AQ9Y240 323 aa6.43□□□□□ -1.38
FXN-204ENST00000484259 POTEIP0CG38 1075 aa6.42□□□□□ -1.38
FXN-204ENST00000484259 POTEMA6NI47 508 aa6.41□□□□□ -1.38
FXN-204ENST00000484259 KCNA4P22459 653 aa6.41□□□□□ -1.38
FXN-204ENST00000484259 SPDYE1Q8NFV5 336 aaPredicted RBP6.41□□□□□ -1.38
FXN-204ENST00000484259 MYT1Q01538 1121 aa6.4□□□□□ -1.38
FXN-204ENST00000484259 ATF5Q9Y2D1 282 aaPredicted RBP6.4□□□□□ -1.38
FXN-204ENST00000484259 ARXQ96QS3 562 aa6.39□□□□□ -1.39
FXN-204ENST00000484259 SPDYE2BA6NHP3 402 aa6.38□□□□□ -1.39
FXN-204ENST00000484259 SPDYE6P0CI01 402 aa6.38□□□□□ -1.39
FXN-204ENST00000484259 SPDYE2Q495Y8 402 aa6.38□□□□□ -1.39
FXN-204ENST00000484259 PELP1Q8IZL8 1130 aaKnown RBP6.38□□□□□ -1.39
FXN-204ENST00000484259 POTEGQ6S5H5 508 aa6.37□□□□□ -1.39
FXN-204ENST00000484259 CLCN6P51797 869 aa6.35□□□□□ -1.39
FXN-204ENST00000484259 DCBLD2Q96PD2 775 aa6.35□□□□□ -1.39
FXN-204ENST00000484259 PCDH10Q9P2E7 1040 aa6.35□□□□□ -1.39
FXN-204ENST00000484259 CHADLQ6NUI6 762 aa6.34□□□□□ -1.39
FXN-204ENST00000484259 CD44P16070 742 aaKnown RBP6.31□□□□□ -1.4
FXN-204ENST00000484259 OTUD5Q96G74 571 aa6.31□□□□□ -1.4
FXN-204ENST00000484259 ERICH6Q7L0X2 663 aa6.26□□□□□ -1.41
FXN-204ENST00000484259 PRR29P0C7W0 189 aa6.25□□□□□ -1.41
FXN-204ENST00000484259 FBLN2P98095 1184 aa6.25□□□□□ -1.41
FXN-204ENST00000484259 PRKCSHP14314 528 aaPredicted RBP6.23□□□□□ -1.41
FXN-204ENST00000484259 ZNF692Q9BU19 519 aaPredicted RBP6.22□□□□□ -1.41
FXN-204ENST00000484259 SSUH2Q9Y2M2 353 aa6.21□□□□□ -1.42
FXN-204ENST00000484259 POTEB2H3BUK9 544 aa6.2□□□□□ -1.42
FXN-204ENST00000484259 RANGAP1P46060 587 aaPredicted RBP6.2□□□□□ -1.42
FXN-204ENST00000484259 BCANQ96GW7 911 aa6.2□□□□□ -1.42
FXN-204ENST00000484259 FARP1Q9Y4F1 1045 aaPredicted RBP6.19□□□□□ -1.42
FXN-204ENST00000484259 FOXD4L1Q9NU39 408 aa6.18□□□□□ -1.42
FXN-204ENST00000484259 HOMEZQ8IX15 550 aa6.17□□□□□ -1.42
FXN-204ENST00000484259 ZNF579Q8NAF0 562 aaKnown RBP6.17□□□□□ -1.42
FXN-204ENST00000484259 SLC4A1APQ9BWU0 796 aaKnown RBP6.17□□□□□ -1.42
FXN-204ENST00000484259 TAOK2Q9UL54 1235 aa6.17□□□□□ -1.42
FXN-204ENST00000484259 TIMELESSQ9UNS1 1208 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms