RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 NISCHQ9Y2I1 1504 aa36.07■■■■□ 3.36
SHANK2-204ENST00000409530 CCDC180Q9P1Z9 1646 aa31.59■■■□□ 2.65
SHANK2-204ENST00000409530 ABCC9O60706 1549 aa30.35■■■□□ 2.45
SHANK2-204ENST00000409530 ZCCHC6Q5VYS8 1495 aaKnown RBP30.24■■■□□ 2.43
SHANK2-204ENST00000409530 DCAF8L2P0C7V8 631 aa30.16■■■□□ 2.42
SHANK2-204ENST00000409530 DCAF1Q9Y4B6 1507 aa29.67■■■□□ 2.34
SHANK2-204ENST00000409530 SHROOM4Q9ULL8 1493 aa29.51■■■□□ 2.31
SHANK2-204ENST00000409530 NACADO15069 1562 aa29.45■■■□□ 2.31
SHANK2-204ENST00000409530 MYO15BQ96JP2 1530 aa29.39■■■□□ 2.3
SHANK2-204ENST00000409530 RB1CC1Q8TDY2 1594 aa29.36■■■□□ 2.29
SHANK2-204ENST00000409530 SCRIBQ14160 1630 aa29.22■■■□□ 2.27
SHANK2-204ENST00000409530 UNC13AQ9UPW8 1703 aa28.87■■■□□ 2.21
SHANK2-204ENST00000409530 PABPN1Q86U42 306 aaKnown RBP eCLIP28.57■■■□□ 2.16
SHANK2-204ENST00000409530 BICRAQ9NZM4 1560 aa28.48■■■□□ 2.15
SHANK2-204ENST00000409530 SUPT5HO00267 1087 aaKnown RBP28.16■■■□□ 2.1
SHANK2-204ENST00000409530 CECR2Q9BXF3 1484 aa28.15■■■□□ 2.1
SHANK2-204ENST00000409530 MROH2BQ7Z745 1585 aa27.93■■■□□ 2.06
SHANK2-204ENST00000409530 BAZ1AQ9NRL2 1556 aaPredicted RBP27.89■■■□□ 2.06
SHANK2-204ENST00000409530 RSF1Q96T23 1441 aaPredicted RBP27.87■■■□□ 2.05
SHANK2-204ENST00000409530 SMARCA4P51532 1647 aa27.86■■■□□ 2.05
SHANK2-204ENST00000409530 WIZO95785 1651 aa27.75■■■□□ 2.03
SHANK2-204ENST00000409530 EIF4G1Q04637 1599 aaKnown RBP27.69■■■□□ 2.02
SHANK2-204ENST00000409530 ATAD2BQ9ULI0 1458 aa27.42■■□□□ 1.98
SHANK2-204ENST00000409530 CC2D2AQ9P2K1 1620 aa27.39■■□□□ 1.98
SHANK2-204ENST00000409530 SMARCA2P51531 1590 aa27.39■■□□□ 1.98
SHANK2-204ENST00000409530 PEG3Q9GZU2 1588 aa27.39■■□□□ 1.98
SHANK2-204ENST00000409530 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
SHANK2-204ENST00000409530 BAZ1BQ9UIG0 1483 aaKnown RBP27.32■■□□□ 1.96
SHANK2-204ENST00000409530 NCAPD3P42695 1498 aa27.16■■□□□ 1.94
SHANK2-204ENST00000409530 HMGXB3Q12766 1538 aa27.15■■□□□ 1.94
SHANK2-204ENST00000409530 CCDC88BA6NC98 1476 aa27.07■■□□□ 1.92
SHANK2-204ENST00000409530 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
SHANK2-204ENST00000409530 CHIC1Q5VXU3 224 aa26.62■■□□□ 1.85
SHANK2-204ENST00000409530 ABCC8Q09428 1581 aa26.55■■□□□ 1.84
SHANK2-204ENST00000409530 NESP48681 1621 aa26.54■■□□□ 1.84
SHANK2-204ENST00000409530 CFTRP13569 1480 aa26.51■■□□□ 1.83
SHANK2-204ENST00000409530 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
SHANK2-204ENST00000409530 PRDM2Q13029 1718 aa26.46■■□□□ 1.83
SHANK2-204ENST00000409530 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
SHANK2-204ENST00000409530 LAMC3Q9Y6N6 1575 aa26.36■■□□□ 1.81
SHANK2-204ENST00000409530 FANCD2Q9BXW9 1451 aa26.28■■□□□ 1.8
SHANK2-204ENST00000409530 WRNQ14191 1432 aaPredicted RBP eCLIP26.28■■□□□ 1.8
SHANK2-204ENST00000409530 SYNJ1O43426 1573 aa26.25■■□□□ 1.79
SHANK2-204ENST00000409530 KIF21AQ7Z4S6 1674 aa26.23■■□□□ 1.79
SHANK2-204ENST00000409530 CEP164Q9UPV0 1460 aa26.16■■□□□ 1.78
SHANK2-204ENST00000409530 PDS5BQ9NTI5 1447 aa26.16■■□□□ 1.78
SHANK2-204ENST00000409530 CUX1P39880 1505 aa26.14■■□□□ 1.77
SHANK2-204ENST00000409530 TOP2BQ02880 1626 aa26.09■■□□□ 1.77
SHANK2-204ENST00000409530 FAM9AQ8IZU1 332 aaPredicted RBP26.08■■□□□ 1.76
SHANK2-204ENST00000409530 BIVM-ERCC5R4GMW8 1640 aa26.07■■□□□ 1.76
SHANK2-204ENST00000409530 ERCC6Q03468 1493 aa26.05■■□□□ 1.76
SHANK2-204ENST00000409530 URB2Q14146 1524 aaKnown RBP25.98■■□□□ 1.75
SHANK2-204ENST00000409530 DNMBPQ6XZF7 1577 aa25.97■■□□□ 1.75
SHANK2-204ENST00000409530 TOPBP1Q92547 1522 aa25.95■■□□□ 1.75
SHANK2-204ENST00000409530 FGD5Q6ZNL6 1462 aa25.92■■□□□ 1.74
SHANK2-204ENST00000409530 SOGA1O94964 1423 aa25.91■■□□□ 1.74
SHANK2-204ENST00000409530 MRC2Q9UBG0 1479 aa25.89■■□□□ 1.73
SHANK2-204ENST00000409530 EHMT2Q96KQ7 1210 aa25.88■■□□□ 1.73
SHANK2-204ENST00000409530 RUSC2Q8N2Y8 1516 aa25.85■■□□□ 1.73
SHANK2-204ENST00000409530 POLA1P09884 1462 aaPredicted RBP25.82■■□□□ 1.72
SHANK2-204ENST00000409530 THOC2Q8NI27 1593 aaKnown RBP25.8■■□□□ 1.72
SHANK2-204ENST00000409530 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
SHANK2-204ENST00000409530 WDR62O43379 1518 aa25.74■■□□□ 1.71
SHANK2-204ENST00000409530 LOC105371045A0A1W2PR82 267 aa25.71■■□□□ 1.71
SHANK2-204ENST00000409530 CUX2O14529 1486 aa25.7■■□□□ 1.71
SHANK2-204ENST00000409530 KIF27Q86VH2 1401 aa25.62■■□□□ 1.69
SHANK2-204ENST00000409530 EEA1Q15075 1411 aa25.61■■□□□ 1.69
SHANK2-204ENST00000409530 WDR97A6NE52 1622 aa25.61■■□□□ 1.69
SHANK2-204ENST00000409530 CSRNP3Q8WYN3 585 aa25.58■■□□□ 1.69
SHANK2-204ENST00000409530 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.69
SHANK2-204ENST00000409530 TARBP1Q13395 1621 aaKnown RBP25.58■■□□□ 1.68
SHANK2-204ENST00000409530 TDRD9Q8NDG6 1382 aaKnown RBP25.55■■□□□ 1.68
SHANK2-204ENST00000409530 IFT140Q96RY7 1462 aa25.48■■□□□ 1.67
SHANK2-204ENST00000409530 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
SHANK2-204ENST00000409530 ABCA5Q8WWZ7 1642 aa25.46■■□□□ 1.67
SHANK2-204ENST00000409530 AQRO60306 1485 aaKnown RBP eCLIP25.44■■□□□ 1.665e-7■■■■■ 27.6
SHANK2-204ENST00000409530 GAPVD1Q14C86 1478 aa25.43■■□□□ 1.66
SHANK2-204ENST00000409530 EIF4G3O43432 1585 aaKnown RBP25.4■■□□□ 1.66
SHANK2-204ENST00000409530 KIF21BO75037 1637 aa25.4■■□□□ 1.66
SHANK2-204ENST00000409530 PBRM1Q86U86 1689 aa25.39■■□□□ 1.66
SHANK2-204ENST00000409530 RAPGEF2Q9Y4G8 1499 aa25.39■■□□□ 1.66
SHANK2-204ENST00000409530 IGF1RP08069 1367 aa25.38■■□□□ 1.65
SHANK2-204ENST00000409530 GOLGA3Q08378 1498 aa25.37■■□□□ 1.65
SHANK2-204ENST00000409530 UBTFP17480 764 aaKnown RBP25.37■■□□□ 1.65
SHANK2-204ENST00000409530 PRXQ9BXM0 1461 aa25.32■■□□□ 1.64
SHANK2-204ENST00000409530 CARMIL1Q5VZK9 1371 aa25.29■■□□□ 1.64
SHANK2-204ENST00000409530 ERICH3Q5RHP9 1530 aa25.28■■□□□ 1.64
SHANK2-204ENST00000409530 CUL7Q14999 1698 aa25.27■■□□□ 1.64
SHANK2-204ENST00000409530 RANGAP1P46060 587 aaPredicted RBP25.26■■□□□ 1.63
SHANK2-204ENST00000409530 GRIN2BQ13224 1484 aa25.25■■□□□ 1.63
SHANK2-204ENST00000409530 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
SHANK2-204ENST00000409530 ADAMTS12P58397 1594 aa25.18■■□□□ 1.62
SHANK2-204ENST00000409530 TNIKQ9UKE5 1360 aa25.15■■□□□ 1.62
SHANK2-204ENST00000409530 CEP162Q5TB80 1403 aa25.12■■□□□ 1.61
SHANK2-204ENST00000409530 FBLN2P98095 1184 aa25.1■■□□□ 1.61
SHANK2-204ENST00000409530 FHAD1B1AJZ9 1412 aa25.09■■□□□ 1.61
SHANK2-204ENST00000409530 MAGI1Q96QZ7 1491 aaPredicted RBP25.05■■□□□ 1.6
SHANK2-204ENST00000409530 CTTNBP2Q8WZ74 1663 aa25.03■■□□□ 1.6
SHANK2-204ENST00000409530 CHMP7Q8WUX9 453 aaPredicted RBP25■■□□□ 1.59
SHANK2-204ENST00000409530 CLIP1P30622 1438 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms