Protein–RNA interactions for Protein: Q8TD19

NEK9, Serine/threonine-protein kinase Nek9, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9Q8TD19 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
NEK9Q8TD19 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.47■■■□□ 2.79
NEK9Q8TD19 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.46■■■□□ 2.79
NEK9Q8TD19 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.46■■■□□ 2.79
NEK9Q8TD19 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.46■■■□□ 2.79
NEK9Q8TD19 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
NEK9Q8TD19 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
NEK9Q8TD19 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
NEK9Q8TD19 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
NEK9Q8TD19 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
NEK9Q8TD19 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.36■■■□□ 2.77
NEK9Q8TD19 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.35■■■□□ 2.77
NEK9Q8TD19 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.3■■■□□ 2.76
NEK9Q8TD19 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
NEK9Q8TD19 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
NEK9Q8TD19 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.27■■■□□ 2.76
NEK9Q8TD19 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.27■■■□□ 2.76
NEK9Q8TD19 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.27■■■□□ 2.76
NEK9Q8TD19 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
NEK9Q8TD19 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
NEK9Q8TD19 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
NEK9Q8TD19 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
NEK9Q8TD19 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
NEK9Q8TD19 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
NEK9Q8TD19 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
NEK9Q8TD19 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.16■■■□□ 2.74
NEK9Q8TD19 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
NEK9Q8TD19 DYNLL1-208ENST00000550178 581 ntBASIC32.15■■■□□ 2.74
NEK9Q8TD19 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.14■■■□□ 2.74
NEK9Q8TD19 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.74
NEK9Q8TD19 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
NEK9Q8TD19 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.1■■■□□ 2.73
NEK9Q8TD19 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
NEK9Q8TD19 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.07■■■□□ 2.72
NEK9Q8TD19 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
NEK9Q8TD19 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.06■■■□□ 2.72
NEK9Q8TD19 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
NEK9Q8TD19 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.03■■■□□ 2.72
NEK9Q8TD19 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32■■■□□ 2.71
NEK9Q8TD19 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
NEK9Q8TD19 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
NEK9Q8TD19 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
NEK9Q8TD19 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
NEK9Q8TD19 AL031258.1-201ENST00000623562 325 ntBASIC31.94■■■□□ 2.7
NEK9Q8TD19 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
NEK9Q8TD19 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NEK9Q8TD19 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.87■■■□□ 2.69
NEK9Q8TD19 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
NEK9Q8TD19 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
NEK9Q8TD19 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
NEK9Q8TD19 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.85■■■□□ 2.69
NEK9Q8TD19 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
NEK9Q8TD19 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.79■■■□□ 2.68
NEK9Q8TD19 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NEK9Q8TD19 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.75■■■□□ 2.67
NEK9Q8TD19 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
NEK9Q8TD19 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.72■■■□□ 2.67
NEK9Q8TD19 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.71■■■□□ 2.67
NEK9Q8TD19 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.71■■■□□ 2.67
NEK9Q8TD19 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NEK9Q8TD19 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NEK9Q8TD19 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NEK9Q8TD19 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
NEK9Q8TD19 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
NEK9Q8TD19 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.61■■■□□ 2.65
NEK9Q8TD19 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.6■■■□□ 2.65
NEK9Q8TD19 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.6■■■□□ 2.65
NEK9Q8TD19 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.58■■■□□ 2.65
NEK9Q8TD19 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
NEK9Q8TD19 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
NEK9Q8TD19 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NEK9Q8TD19 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.55■■■□□ 2.64
NEK9Q8TD19 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NEK9Q8TD19 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.54■■■□□ 2.64
NEK9Q8TD19 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
NEK9Q8TD19 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NEK9Q8TD19 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.49■■■□□ 2.63
NEK9Q8TD19 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.49■■■□□ 2.63
NEK9Q8TD19 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
NEK9Q8TD19 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.48■■■□□ 2.63
NEK9Q8TD19 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.46■■■□□ 2.63
NEK9Q8TD19 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.46■■■□□ 2.63
NEK9Q8TD19 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.45■■■□□ 2.63
NEK9Q8TD19 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NEK9Q8TD19 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.43■■■□□ 2.62
NEK9Q8TD19 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NEK9Q8TD19 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.43■■■□□ 2.62
NEK9Q8TD19 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
NEK9Q8TD19 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NEK9Q8TD19 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.42■■■□□ 2.62
NEK9Q8TD19 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NEK9Q8TD19 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.38■■■□□ 2.61
NEK9Q8TD19 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.37■■■□□ 2.61
NEK9Q8TD19 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
NEK9Q8TD19 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.35■■■□□ 2.61
NEK9Q8TD19 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
NEK9Q8TD19 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
NEK9Q8TD19 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.33■■■□□ 2.61
NEK9Q8TD19 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
NEK9Q8TD19 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms