Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.23■■■□□ 2.11
EFCAB3Q8N7B9 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28.21■■■□□ 2.11
EFCAB3Q8N7B9 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
EFCAB3Q8N7B9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
EFCAB3Q8N7B9 AC015813.7-201ENST00000623294 581 ntBASIC28.19■■■□□ 2.1
EFCAB3Q8N7B9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.19■■■□□ 2.1
EFCAB3Q8N7B9 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
EFCAB3Q8N7B9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
EFCAB3Q8N7B9 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
EFCAB3Q8N7B9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
EFCAB3Q8N7B9 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
EFCAB3Q8N7B9 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
EFCAB3Q8N7B9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.06■■■□□ 2.08
EFCAB3Q8N7B9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.06■■■□□ 2.08
EFCAB3Q8N7B9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
EFCAB3Q8N7B9 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
EFCAB3Q8N7B9 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.01■■■□□ 2.07
EFCAB3Q8N7B9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
EFCAB3Q8N7B9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.99■■■□□ 2.07
EFCAB3Q8N7B9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
EFCAB3Q8N7B9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
EFCAB3Q8N7B9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.96■■■□□ 2.07
EFCAB3Q8N7B9 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.07
EFCAB3Q8N7B9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
EFCAB3Q8N7B9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
EFCAB3Q8N7B9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
EFCAB3Q8N7B9 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.9■■■□□ 2.06
EFCAB3Q8N7B9 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
EFCAB3Q8N7B9 AP002365.1-201ENST00000603448 772 ntBASIC27.87■■■□□ 2.05
EFCAB3Q8N7B9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
EFCAB3Q8N7B9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
EFCAB3Q8N7B9 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
EFCAB3Q8N7B9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
EFCAB3Q8N7B9 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
EFCAB3Q8N7B9 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
EFCAB3Q8N7B9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
EFCAB3Q8N7B9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
EFCAB3Q8N7B9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
EFCAB3Q8N7B9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.74■■■□□ 2.03
EFCAB3Q8N7B9 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
EFCAB3Q8N7B9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.71■■■□□ 2.03
EFCAB3Q8N7B9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
EFCAB3Q8N7B9 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.71■■■□□ 2.03
EFCAB3Q8N7B9 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
EFCAB3Q8N7B9 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
EFCAB3Q8N7B9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
EFCAB3Q8N7B9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
EFCAB3Q8N7B9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
EFCAB3Q8N7B9 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
EFCAB3Q8N7B9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
EFCAB3Q8N7B9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
EFCAB3Q8N7B9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.63■■■□□ 2.01
EFCAB3Q8N7B9 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
EFCAB3Q8N7B9 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
EFCAB3Q8N7B9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
EFCAB3Q8N7B9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.58■■■□□ 2.01
EFCAB3Q8N7B9 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
EFCAB3Q8N7B9 AC145285.7-201ENST00000614819 1539 ntBASIC27.57■■■□□ 2
EFCAB3Q8N7B9 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.56■■■□□ 2
EFCAB3Q8N7B9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.55■■■□□ 2
EFCAB3Q8N7B9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.55■■■□□ 2
EFCAB3Q8N7B9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
EFCAB3Q8N7B9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
EFCAB3Q8N7B9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.53■■■□□ 2
EFCAB3Q8N7B9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.52■■■□□ 2
EFCAB3Q8N7B9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
EFCAB3Q8N7B9 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
EFCAB3Q8N7B9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.51■■□□□ 1.99
EFCAB3Q8N7B9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
EFCAB3Q8N7B9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.51■■□□□ 1.99
EFCAB3Q8N7B9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.49■■□□□ 1.99
EFCAB3Q8N7B9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
EFCAB3Q8N7B9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
EFCAB3Q8N7B9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
EFCAB3Q8N7B9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.45■■□□□ 1.99
EFCAB3Q8N7B9 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.45■■□□□ 1.98
EFCAB3Q8N7B9 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
EFCAB3Q8N7B9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
EFCAB3Q8N7B9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
EFCAB3Q8N7B9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
EFCAB3Q8N7B9 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
EFCAB3Q8N7B9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
EFCAB3Q8N7B9 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.38■■□□□ 1.97
EFCAB3Q8N7B9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.36■■□□□ 1.97
EFCAB3Q8N7B9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
EFCAB3Q8N7B9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
EFCAB3Q8N7B9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
EFCAB3Q8N7B9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.35■■□□□ 1.97
EFCAB3Q8N7B9 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
EFCAB3Q8N7B9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
EFCAB3Q8N7B9 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
EFCAB3Q8N7B9 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.3■■□□□ 1.96
EFCAB3Q8N7B9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.29■■□□□ 1.96
EFCAB3Q8N7B9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
EFCAB3Q8N7B9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
EFCAB3Q8N7B9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.27■■□□□ 1.96
EFCAB3Q8N7B9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
EFCAB3Q8N7B9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
EFCAB3Q8N7B9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
EFCAB3Q8N7B9 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 365.1 ms