Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.51■■□□□ 1.83
SH3D21A4FU49 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SH3D21A4FU49 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
SH3D21A4FU49 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SH3D21A4FU49 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SH3D21A4FU49 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
SH3D21A4FU49 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.45■■□□□ 1.83
SH3D21A4FU49 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
SH3D21A4FU49 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
SH3D21A4FU49 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.42■■□□□ 1.82
SH3D21A4FU49 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SH3D21A4FU49 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SH3D21A4FU49 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.41■■□□□ 1.82
SH3D21A4FU49 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.41■■□□□ 1.82
SH3D21A4FU49 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SH3D21A4FU49 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SH3D21A4FU49 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
SH3D21A4FU49 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SH3D21A4FU49 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SH3D21A4FU49 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.32■■□□□ 1.8
SH3D21A4FU49 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SH3D21A4FU49 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SH3D21A4FU49 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
SH3D21A4FU49 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SH3D21A4FU49 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SH3D21A4FU49 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SH3D21A4FU49 AC145285.7-201ENST00000614819 1539 ntBASIC26.22■■□□□ 1.79
SH3D21A4FU49 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
SH3D21A4FU49 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SH3D21A4FU49 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SH3D21A4FU49 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SH3D21A4FU49 AP002365.1-201ENST00000603448 772 ntBASIC26.16■■□□□ 1.78
SH3D21A4FU49 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.15■■□□□ 1.78
SH3D21A4FU49 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SH3D21A4FU49 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.13■■□□□ 1.77
SH3D21A4FU49 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SH3D21A4FU49 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SH3D21A4FU49 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SH3D21A4FU49 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SH3D21A4FU49 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SH3D21A4FU49 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
SH3D21A4FU49 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH3D21A4FU49 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.04■■□□□ 1.76
SH3D21A4FU49 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SH3D21A4FU49 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SH3D21A4FU49 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SH3D21A4FU49 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
SH3D21A4FU49 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26■■□□□ 1.75
SH3D21A4FU49 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SH3D21A4FU49 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
SH3D21A4FU49 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
SH3D21A4FU49 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.96■■□□□ 1.75
SH3D21A4FU49 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.96■■□□□ 1.75
SH3D21A4FU49 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SH3D21A4FU49 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SH3D21A4FU49 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.94■■□□□ 1.74
SH3D21A4FU49 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SH3D21A4FU49 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SH3D21A4FU49 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
SH3D21A4FU49 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.93■■□□□ 1.74
SH3D21A4FU49 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
SH3D21A4FU49 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC25.93■■□□□ 1.74
SH3D21A4FU49 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SH3D21A4FU49 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SH3D21A4FU49 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SH3D21A4FU49 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC25.91■■□□□ 1.74
SH3D21A4FU49 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.9■■□□□ 1.74
SH3D21A4FU49 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SH3D21A4FU49 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SH3D21A4FU49 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
SH3D21A4FU49 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
SH3D21A4FU49 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC25.86■■□□□ 1.73
SH3D21A4FU49 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SH3D21A4FU49 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
SH3D21A4FU49 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.85■■□□□ 1.73
SH3D21A4FU49 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.85■■□□□ 1.73
SH3D21A4FU49 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SH3D21A4FU49 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.83■■□□□ 1.73
SH3D21A4FU49 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SH3D21A4FU49 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SH3D21A4FU49 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
SH3D21A4FU49 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SH3D21A4FU49 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SH3D21A4FU49 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
SH3D21A4FU49 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SH3D21A4FU49 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
SH3D21A4FU49 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC25.78■■□□□ 1.72
SH3D21A4FU49 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.78■■□□□ 1.72
SH3D21A4FU49 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SH3D21A4FU49 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
SH3D21A4FU49 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
SH3D21A4FU49 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SH3D21A4FU49 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SH3D21A4FU49 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SH3D21A4FU49 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
SH3D21A4FU49 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.71■■□□□ 1.71
SH3D21A4FU49 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
SH3D21A4FU49 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SH3D21A4FU49 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.68■■□□□ 1.7
SH3D21A4FU49 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms