Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV7-9A0A0J9YWB2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC21.38■■□□□ 1.01
TRBV7-9A0A0J9YWB2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TRBV7-9A0A0J9YWB2 AC015813.7-201ENST00000623294 581 ntBASIC21.35■■□□□ 1.01
TRBV7-9A0A0J9YWB2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRBV7-9A0A0J9YWB2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TRBV7-9A0A0J9YWB2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV7-9A0A0J9YWB2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
TRBV7-9A0A0J9YWB2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRBV7-9A0A0J9YWB2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV7-9A0A0J9YWB2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV7-9A0A0J9YWB2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV7-9A0A0J9YWB2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV7-9A0A0J9YWB2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV7-9A0A0J9YWB2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV7-9A0A0J9YWB2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV7-9A0A0J9YWB2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV7-9A0A0J9YWB2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
TRBV7-9A0A0J9YWB2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV7-9A0A0J9YWB2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV7-9A0A0J9YWB2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TRBV7-9A0A0J9YWB2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.16■□□□□ 0.98
TRBV7-9A0A0J9YWB2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC21.16■□□□□ 0.98
TRBV7-9A0A0J9YWB2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV7-9A0A0J9YWB2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRBV7-9A0A0J9YWB2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV7-9A0A0J9YWB2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV7-9A0A0J9YWB2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TRBV7-9A0A0J9YWB2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV7-9A0A0J9YWB2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV7-9A0A0J9YWB2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV7-9A0A0J9YWB2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV7-9A0A0J9YWB2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV7-9A0A0J9YWB2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRBV7-9A0A0J9YWB2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV7-9A0A0J9YWB2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.06■□□□□ 0.96
TRBV7-9A0A0J9YWB2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV7-9A0A0J9YWB2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC21.05■□□□□ 0.96
TRBV7-9A0A0J9YWB2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TRBV7-9A0A0J9YWB2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV7-9A0A0J9YWB2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV7-9A0A0J9YWB2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC21.02■□□□□ 0.96
TRBV7-9A0A0J9YWB2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV7-9A0A0J9YWB2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV7-9A0A0J9YWB2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV7-9A0A0J9YWB2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV7-9A0A0J9YWB2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV7-9A0A0J9YWB2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV7-9A0A0J9YWB2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV7-9A0A0J9YWB2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV7-9A0A0J9YWB2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV7-9A0A0J9YWB2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV7-9A0A0J9YWB2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV7-9A0A0J9YWB2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
TRBV7-9A0A0J9YWB2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV7-9A0A0J9YWB2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.9■□□□□ 0.94
TRBV7-9A0A0J9YWB2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRBV7-9A0A0J9YWB2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV7-9A0A0J9YWB2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TRBV7-9A0A0J9YWB2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRBV7-9A0A0J9YWB2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV7-9A0A0J9YWB2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV7-9A0A0J9YWB2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV7-9A0A0J9YWB2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
TRBV7-9A0A0J9YWB2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.87■□□□□ 0.93
TRBV7-9A0A0J9YWB2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.87■□□□□ 0.93
TRBV7-9A0A0J9YWB2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV7-9A0A0J9YWB2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV7-9A0A0J9YWB2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV7-9A0A0J9YWB2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV7-9A0A0J9YWB2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV7-9A0A0J9YWB2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.83■□□□□ 0.93
TRBV7-9A0A0J9YWB2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV7-9A0A0J9YWB2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.81■□□□□ 0.92
TRBV7-9A0A0J9YWB2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.81■□□□□ 0.92
TRBV7-9A0A0J9YWB2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.81■□□□□ 0.92
TRBV7-9A0A0J9YWB2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TRBV7-9A0A0J9YWB2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRBV7-9A0A0J9YWB2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV7-9A0A0J9YWB2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV7-9A0A0J9YWB2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV7-9A0A0J9YWB2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
TRBV7-9A0A0J9YWB2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV7-9A0A0J9YWB2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TRBV7-9A0A0J9YWB2 AC006077.2-201ENST00000623591 457 ntBASIC20.74■□□□□ 0.91
TRBV7-9A0A0J9YWB2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV7-9A0A0J9YWB2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.73■□□□□ 0.91
TRBV7-9A0A0J9YWB2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.71■□□□□ 0.91
TRBV7-9A0A0J9YWB2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV7-9A0A0J9YWB2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV7-9A0A0J9YWB2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV7-9A0A0J9YWB2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV7-9A0A0J9YWB2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV7-9A0A0J9YWB2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.65■□□□□ 0.9
TRBV7-9A0A0J9YWB2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.65■□□□□ 0.9
TRBV7-9A0A0J9YWB2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV7-9A0A0J9YWB2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TRBV7-9A0A0J9YWB2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.64■□□□□ 0.89
TRBV7-9A0A0J9YWB2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV7-9A0A0J9YWB2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms