Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.86■□□□□ 0.93
IGHV4-28A0A0C4DH34 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
IGHV4-28A0A0C4DH34 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IGHV4-28A0A0C4DH34 DYNLL1-208ENST00000550178 581 ntBASIC20.85■□□□□ 0.93
IGHV4-28A0A0C4DH34 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
IGHV4-28A0A0C4DH34 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
IGHV4-28A0A0C4DH34 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.84■□□□□ 0.93
IGHV4-28A0A0C4DH34 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC20.83■□□□□ 0.92
IGHV4-28A0A0C4DH34 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IGHV4-28A0A0C4DH34 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.8■□□□□ 0.92
IGHV4-28A0A0C4DH34 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.78■□□□□ 0.92
IGHV4-28A0A0C4DH34 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IGHV4-28A0A0C4DH34 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IGHV4-28A0A0C4DH34 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
IGHV4-28A0A0C4DH34 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IGHV4-28A0A0C4DH34 AC145285.7-201ENST00000614819 1539 ntBASIC20.74■□□□□ 0.91
IGHV4-28A0A0C4DH34 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
IGHV4-28A0A0C4DH34 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
IGHV4-28A0A0C4DH34 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
IGHV4-28A0A0C4DH34 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
IGHV4-28A0A0C4DH34 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
IGHV4-28A0A0C4DH34 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.7■□□□□ 0.9
IGHV4-28A0A0C4DH34 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.7■□□□□ 0.9
IGHV4-28A0A0C4DH34 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IGHV4-28A0A0C4DH34 AL031258.1-201ENST00000623562 325 ntBASIC20.67■□□□□ 0.9
IGHV4-28A0A0C4DH34 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
IGHV4-28A0A0C4DH34 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IGHV4-28A0A0C4DH34 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
IGHV4-28A0A0C4DH34 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
IGHV4-28A0A0C4DH34 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
IGHV4-28A0A0C4DH34 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
IGHV4-28A0A0C4DH34 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.62■□□□□ 0.89
IGHV4-28A0A0C4DH34 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IGHV4-28A0A0C4DH34 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
IGHV4-28A0A0C4DH34 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
IGHV4-28A0A0C4DH34 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IGHV4-28A0A0C4DH34 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IGHV4-28A0A0C4DH34 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.59■□□□□ 0.89
IGHV4-28A0A0C4DH34 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IGHV4-28A0A0C4DH34 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IGHV4-28A0A0C4DH34 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
IGHV4-28A0A0C4DH34 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.54■□□□□ 0.88
IGHV4-28A0A0C4DH34 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.52■□□□□ 0.88
IGHV4-28A0A0C4DH34 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.52■□□□□ 0.88
IGHV4-28A0A0C4DH34 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.52■□□□□ 0.88
IGHV4-28A0A0C4DH34 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.51■□□□□ 0.87
IGHV4-28A0A0C4DH34 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
IGHV4-28A0A0C4DH34 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IGHV4-28A0A0C4DH34 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.47■□□□□ 0.87
IGHV4-28A0A0C4DH34 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.45■□□□□ 0.86
IGHV4-28A0A0C4DH34 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IGHV4-28A0A0C4DH34 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
IGHV4-28A0A0C4DH34 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
IGHV4-28A0A0C4DH34 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
IGHV4-28A0A0C4DH34 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IGHV4-28A0A0C4DH34 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.41■□□□□ 0.86
IGHV4-28A0A0C4DH34 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
IGHV4-28A0A0C4DH34 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.39■□□□□ 0.85
IGHV4-28A0A0C4DH34 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.39■□□□□ 0.85
IGHV4-28A0A0C4DH34 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGHV4-28A0A0C4DH34 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGHV4-28A0A0C4DH34 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.37■□□□□ 0.85
IGHV4-28A0A0C4DH34 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IGHV4-28A0A0C4DH34 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IGHV4-28A0A0C4DH34 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IGHV4-28A0A0C4DH34 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
IGHV4-28A0A0C4DH34 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.33■□□□□ 0.85
IGHV4-28A0A0C4DH34 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
IGHV4-28A0A0C4DH34 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IGHV4-28A0A0C4DH34 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IGHV4-28A0A0C4DH34 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.3■□□□□ 0.84
IGHV4-28A0A0C4DH34 RARRES2P7-201ENST00000567349 469 ntBASIC20.28■□□□□ 0.84
IGHV4-28A0A0C4DH34 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.26■□□□□ 0.83
IGHV4-28A0A0C4DH34 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IGHV4-28A0A0C4DH34 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IGHV4-28A0A0C4DH34 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
IGHV4-28A0A0C4DH34 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.23■□□□□ 0.83
IGHV4-28A0A0C4DH34 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.22■□□□□ 0.83
IGHV4-28A0A0C4DH34 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.22■□□□□ 0.83
IGHV4-28A0A0C4DH34 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.19■□□□□ 0.82
IGHV4-28A0A0C4DH34 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IGHV4-28A0A0C4DH34 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IGHV4-28A0A0C4DH34 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.15■□□□□ 0.82
IGHV4-28A0A0C4DH34 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
IGHV4-28A0A0C4DH34 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
IGHV4-28A0A0C4DH34 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IGHV4-28A0A0C4DH34 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IGHV4-28A0A0C4DH34 SETD8P1-201ENST00000623146 1180 ntBASIC20.13■□□□□ 0.81
IGHV4-28A0A0C4DH34 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IGHV4-28A0A0C4DH34 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IGHV4-28A0A0C4DH34 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.11■□□□□ 0.81
IGHV4-28A0A0C4DH34 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
IGHV4-28A0A0C4DH34 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
IGHV4-28A0A0C4DH34 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
IGHV4-28A0A0C4DH34 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
IGHV4-28A0A0C4DH34 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.08■□□□□ 0.81
IGHV4-28A0A0C4DH34 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IGHV4-28A0A0C4DH34 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
IGHV4-28A0A0C4DH34 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IGHV4-28A0A0C4DH34 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms