Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV13-2A0A0B4J235 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
TRAV13-2A0A0B4J235 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
TRAV13-2A0A0B4J235 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV13-2A0A0B4J235 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV13-2A0A0B4J235 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TRAV13-2A0A0B4J235 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV13-2A0A0B4J235 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAV13-2A0A0B4J235 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRAV13-2A0A0B4J235 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV13-2A0A0B4J235 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV13-2A0A0B4J235 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV13-2A0A0B4J235 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAV13-2A0A0B4J235 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TRAV13-2A0A0B4J235 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV13-2A0A0B4J235 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV13-2A0A0B4J235 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRAV13-2A0A0B4J235 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV13-2A0A0B4J235 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV13-2A0A0B4J235 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV13-2A0A0B4J235 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV13-2A0A0B4J235 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV13-2A0A0B4J235 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV13-2A0A0B4J235 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV13-2A0A0B4J235 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRAV13-2A0A0B4J235 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV13-2A0A0B4J235 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV13-2A0A0B4J235 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRAV13-2A0A0B4J235 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV13-2A0A0B4J235 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV13-2A0A0B4J235 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRAV13-2A0A0B4J235 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV13-2A0A0B4J235 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRAV13-2A0A0B4J235 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRAV13-2A0A0B4J235 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV13-2A0A0B4J235 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV13-2A0A0B4J235 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV13-2A0A0B4J235 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV13-2A0A0B4J235 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV13-2A0A0B4J235 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.83■□□□□ 0.61
TRAV13-2A0A0B4J235 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRAV13-2A0A0B4J235 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAV13-2A0A0B4J235 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV13-2A0A0B4J235 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRAV13-2A0A0B4J235 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV13-2A0A0B4J235 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV13-2A0A0B4J235 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRAV13-2A0A0B4J235 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRAV13-2A0A0B4J235 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV13-2A0A0B4J235 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV13-2A0A0B4J235 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TRAV13-2A0A0B4J235 AC145285.7-201ENST00000614819 1539 ntBASIC18.77■□□□□ 0.6
TRAV13-2A0A0B4J235 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV13-2A0A0B4J235 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV13-2A0A0B4J235 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV13-2A0A0B4J235 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TRAV13-2A0A0B4J235 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV13-2A0A0B4J235 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV13-2A0A0B4J235 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV13-2A0A0B4J235 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV13-2A0A0B4J235 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV13-2A0A0B4J235 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV13-2A0A0B4J235 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV13-2A0A0B4J235 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV13-2A0A0B4J235 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV13-2A0A0B4J235 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV13-2A0A0B4J235 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV13-2A0A0B4J235 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRAV13-2A0A0B4J235 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV13-2A0A0B4J235 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV13-2A0A0B4J235 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV13-2A0A0B4J235 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC18.62■□□□□ 0.57
TRAV13-2A0A0B4J235 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV13-2A0A0B4J235 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRAV13-2A0A0B4J235 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV13-2A0A0B4J235 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV13-2A0A0B4J235 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV13-2A0A0B4J235 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV13-2A0A0B4J235 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV13-2A0A0B4J235 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV13-2A0A0B4J235 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV13-2A0A0B4J235 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV13-2A0A0B4J235 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV13-2A0A0B4J235 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV13-2A0A0B4J235 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV13-2A0A0B4J235 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV13-2A0A0B4J235 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV13-2A0A0B4J235 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV13-2A0A0B4J235 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV13-2A0A0B4J235 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV13-2A0A0B4J235 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV13-2A0A0B4J235 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV13-2A0A0B4J235 AL161658.1-201ENST00000623641 1967 ntBASIC18.49■□□□□ 0.55
TRAV13-2A0A0B4J235 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV13-2A0A0B4J235 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV13-2A0A0B4J235 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV13-2A0A0B4J235 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRAV13-2A0A0B4J235 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV13-2A0A0B4J235 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV13-2A0A0B4J235 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms