Protein–RNA interactions for Protein: A0A087WSY6

IGKV3D-15, Immunoglobulin kappa variable 3D-15, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-15A0A087WSY6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
IGKV3D-15A0A087WSY6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
IGKV3D-15A0A087WSY6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
IGKV3D-15A0A087WSY6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.69■■□□□ 1.7
IGKV3D-15A0A087WSY6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
IGKV3D-15A0A087WSY6 AP002365.1-201ENST00000603448 772 ntBASIC25.65■■□□□ 1.7
IGKV3D-15A0A087WSY6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
IGKV3D-15A0A087WSY6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
IGKV3D-15A0A087WSY6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
IGKV3D-15A0A087WSY6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
IGKV3D-15A0A087WSY6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC25.58■■□□□ 1.69
IGKV3D-15A0A087WSY6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
IGKV3D-15A0A087WSY6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
IGKV3D-15A0A087WSY6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
IGKV3D-15A0A087WSY6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.55■■□□□ 1.68
IGKV3D-15A0A087WSY6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
IGKV3D-15A0A087WSY6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
IGKV3D-15A0A087WSY6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
IGKV3D-15A0A087WSY6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
IGKV3D-15A0A087WSY6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
IGKV3D-15A0A087WSY6 DYNLL1-208ENST00000550178 581 ntBASIC25.51■■□□□ 1.67
IGKV3D-15A0A087WSY6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.5■■□□□ 1.67
IGKV3D-15A0A087WSY6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC25.49■■□□□ 1.67
IGKV3D-15A0A087WSY6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
IGKV3D-15A0A087WSY6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
IGKV3D-15A0A087WSY6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC25.47■■□□□ 1.67
IGKV3D-15A0A087WSY6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
IGKV3D-15A0A087WSY6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
IGKV3D-15A0A087WSY6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.43■■□□□ 1.66
IGKV3D-15A0A087WSY6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
IGKV3D-15A0A087WSY6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
IGKV3D-15A0A087WSY6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.41■■□□□ 1.66
IGKV3D-15A0A087WSY6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC25.4■■□□□ 1.66
IGKV3D-15A0A087WSY6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
IGKV3D-15A0A087WSY6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
IGKV3D-15A0A087WSY6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
IGKV3D-15A0A087WSY6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.35■■□□□ 1.65
IGKV3D-15A0A087WSY6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
IGKV3D-15A0A087WSY6 AL031258.1-201ENST00000623562 325 ntBASIC25.35■■□□□ 1.65
IGKV3D-15A0A087WSY6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
IGKV3D-15A0A087WSY6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
IGKV3D-15A0A087WSY6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.32■■□□□ 1.64
IGKV3D-15A0A087WSY6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.29■■□□□ 1.64
IGKV3D-15A0A087WSY6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
IGKV3D-15A0A087WSY6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.27■■□□□ 1.64
IGKV3D-15A0A087WSY6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
IGKV3D-15A0A087WSY6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
IGKV3D-15A0A087WSY6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.21■■□□□ 1.63
IGKV3D-15A0A087WSY6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
IGKV3D-15A0A087WSY6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
IGKV3D-15A0A087WSY6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
IGKV3D-15A0A087WSY6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
IGKV3D-15A0A087WSY6 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.15■■□□□ 1.62
IGKV3D-15A0A087WSY6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
IGKV3D-15A0A087WSY6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
IGKV3D-15A0A087WSY6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
IGKV3D-15A0A087WSY6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
IGKV3D-15A0A087WSY6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
IGKV3D-15A0A087WSY6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.08■■□□□ 1.6
IGKV3D-15A0A087WSY6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
IGKV3D-15A0A087WSY6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
IGKV3D-15A0A087WSY6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.05■■□□□ 1.6
IGKV3D-15A0A087WSY6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.05■■□□□ 1.6
IGKV3D-15A0A087WSY6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
IGKV3D-15A0A087WSY6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.03■■□□□ 1.6
IGKV3D-15A0A087WSY6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
IGKV3D-15A0A087WSY6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.02■■□□□ 1.6
IGKV3D-15A0A087WSY6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
IGKV3D-15A0A087WSY6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
IGKV3D-15A0A087WSY6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
IGKV3D-15A0A087WSY6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
IGKV3D-15A0A087WSY6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.98■■□□□ 1.59
IGKV3D-15A0A087WSY6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC24.96■■□□□ 1.59
IGKV3D-15A0A087WSY6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC24.96■■□□□ 1.59
IGKV3D-15A0A087WSY6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.58
IGKV3D-15A0A087WSY6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
IGKV3D-15A0A087WSY6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
IGKV3D-15A0A087WSY6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC24.92■■□□□ 1.58
IGKV3D-15A0A087WSY6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
IGKV3D-15A0A087WSY6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.92■■□□□ 1.58
IGKV3D-15A0A087WSY6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.92■■□□□ 1.58
IGKV3D-15A0A087WSY6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
IGKV3D-15A0A087WSY6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
IGKV3D-15A0A087WSY6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.87■■□□□ 1.57
IGKV3D-15A0A087WSY6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
IGKV3D-15A0A087WSY6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
IGKV3D-15A0A087WSY6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
IGKV3D-15A0A087WSY6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
IGKV3D-15A0A087WSY6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.83■■□□□ 1.57
IGKV3D-15A0A087WSY6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
IGKV3D-15A0A087WSY6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
IGKV3D-15A0A087WSY6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.82■■□□□ 1.56
IGKV3D-15A0A087WSY6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
IGKV3D-15A0A087WSY6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.81■■□□□ 1.56
IGKV3D-15A0A087WSY6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
IGKV3D-15A0A087WSY6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.8■■□□□ 1.56
IGKV3D-15A0A087WSY6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.76■■□□□ 1.55
IGKV3D-15A0A087WSY6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
IGKV3D-15A0A087WSY6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
IGKV3D-15A0A087WSY6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms