Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV20-1A0A075B6N2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.54■□□□□ 0.72
TRBV20-1A0A075B6N2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV20-1A0A075B6N2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV20-1A0A075B6N2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.52■□□□□ 0.72
TRBV20-1A0A075B6N2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV20-1A0A075B6N2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.51■□□□□ 0.71
TRBV20-1A0A075B6N2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV20-1A0A075B6N2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV20-1A0A075B6N2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV20-1A0A075B6N2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV20-1A0A075B6N2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.49■□□□□ 0.71
TRBV20-1A0A075B6N2 AC139426.1-201ENST00000568218 2529 ntBASIC19.47■□□□□ 0.71
TRBV20-1A0A075B6N2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV20-1A0A075B6N2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV20-1A0A075B6N2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRBV20-1A0A075B6N2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.41■□□□□ 0.7
TRBV20-1A0A075B6N2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRBV20-1A0A075B6N2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV20-1A0A075B6N2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV20-1A0A075B6N2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.4■□□□□ 0.7
TRBV20-1A0A075B6N2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV20-1A0A075B6N2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
TRBV20-1A0A075B6N2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV20-1A0A075B6N2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV20-1A0A075B6N2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV20-1A0A075B6N2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV20-1A0A075B6N2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV20-1A0A075B6N2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV20-1A0A075B6N2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
TRBV20-1A0A075B6N2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV20-1A0A075B6N2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV20-1A0A075B6N2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TRBV20-1A0A075B6N2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TRBV20-1A0A075B6N2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC19.33■□□□□ 0.69
TRBV20-1A0A075B6N2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.31■□□□□ 0.68
TRBV20-1A0A075B6N2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV20-1A0A075B6N2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV20-1A0A075B6N2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TRBV20-1A0A075B6N2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV20-1A0A075B6N2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV20-1A0A075B6N2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRBV20-1A0A075B6N2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV20-1A0A075B6N2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV20-1A0A075B6N2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV20-1A0A075B6N2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV20-1A0A075B6N2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV20-1A0A075B6N2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV20-1A0A075B6N2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV20-1A0A075B6N2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV20-1A0A075B6N2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV20-1A0A075B6N2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.19■□□□□ 0.66
TRBV20-1A0A075B6N2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV20-1A0A075B6N2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRBV20-1A0A075B6N2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC19.17■□□□□ 0.66
TRBV20-1A0A075B6N2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV20-1A0A075B6N2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV20-1A0A075B6N2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.12■□□□□ 0.65
TRBV20-1A0A075B6N2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV20-1A0A075B6N2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV20-1A0A075B6N2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV20-1A0A075B6N2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV20-1A0A075B6N2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV20-1A0A075B6N2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV20-1A0A075B6N2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.03■□□□□ 0.64
TRBV20-1A0A075B6N2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV20-1A0A075B6N2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TRBV20-1A0A075B6N2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV20-1A0A075B6N2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TRBV20-1A0A075B6N2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV20-1A0A075B6N2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TRBV20-1A0A075B6N2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRBV20-1A0A075B6N2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV20-1A0A075B6N2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV20-1A0A075B6N2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV20-1A0A075B6N2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRBV20-1A0A075B6N2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
TRBV20-1A0A075B6N2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV20-1A0A075B6N2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV20-1A0A075B6N2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV20-1A0A075B6N2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV20-1A0A075B6N2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV20-1A0A075B6N2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV20-1A0A075B6N2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV20-1A0A075B6N2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRBV20-1A0A075B6N2 ABCB10P3-201ENST00000561950 2166 ntBASIC18.9■□□□□ 0.62
TRBV20-1A0A075B6N2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV20-1A0A075B6N2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRBV20-1A0A075B6N2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV20-1A0A075B6N2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV20-1A0A075B6N2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV20-1A0A075B6N2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRBV20-1A0A075B6N2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV20-1A0A075B6N2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRBV20-1A0A075B6N2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV20-1A0A075B6N2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV20-1A0A075B6N2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV20-1A0A075B6N2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV20-1A0A075B6N2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV20-1A0A075B6N2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms