Protein–RNA interactions for Protein: Q9UNX4

WDR3, WD repeat-containing protein 3, humanhuman

Known RBP eCLIP

Length 943 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR3Q9UNX4 PKMYT1-202ENST00000382240 1991 ntTSL 221.64■■□□□ 1.057e-6■■□□□ 11.9
WDR3Q9UNX4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.56■■□□□ 1.047e-6■■□□□ 11.9
WDR3Q9UNX4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.27■■□□□ 17e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.92■□□□□ 0.947e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-223ENST00000598717 811 ntTSL 520.46■□□□□ 0.877e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-208ENST00000593738 302 ntTSL 320.04■□□□□ 0.87e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.767e-6■■□□□ 11.9
WDR3Q9UNX4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.71■□□□□ 0.757e-6■■□□□ 11.9
WDR3Q9UNX4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.6■□□□□ 0.737e-6■■□□□ 11.9
WDR3Q9UNX4 PKMYT1-220ENST00000576268 1091 ntTSL 319.2■□□□□ 0.667e-6■■□□□ 11.9
WDR3Q9UNX4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.85■□□□□ 0.617e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.67e-6■■□□□ 11.9
WDR3Q9UNX4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.57e-6■■□□□ 11.9
WDR3Q9UNX4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.95■□□□□ 0.462e-7■■□□□ 11.9
WDR3Q9UNX4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.397e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.377e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.367e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.247e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.227e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-214ENST00000589416 773 ntTSL 416.39■□□□□ 0.217e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-209ENST00000587941 533 ntTSL 216.37■□□□□ 0.217e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-207ENST00000587840 655 ntTSL 516.19■□□□□ 0.187e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-206ENST00000587505 791 ntTSL 515.91■□□□□ 0.147e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.047e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-213ENST00000600239 5565 ntTSL 215.29■□□□□ 0.047e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.017e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-212ENST00000598863 551 ntTSL 315.03■□□□□ -07e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-218ENST00000590009 953 ntTSL 514.53□□□□□ -0.087e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-209ENST00000597280 814 ntTSL 314.44□□□□□ -0.17e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC14.32□□□□□ -0.127e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-204ENST00000593795 747 ntTSL 514.27□□□□□ -0.137e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.157e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-213ENST00000589283 599 ntTSL 314.08□□□□□ -0.167e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.257e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC13.46□□□□□ -0.267e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-211ENST00000557726 621 ntTSL 313.29□□□□□ -0.287e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-207ENST00000554731 888 ntTSL 312.98□□□□□ -0.337e-6■■□□□ 11.9
WDR3Q9UNX4 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC12.5□□□□□ -0.412e-7■■□□□ 11.9
WDR3Q9UNX4 ILF3-208ENST00000587928 4230 ntTSL 211.76□□□□□ -0.537e-6■■□□□ 11.9
WDR3Q9UNX4 TIMM17A-201ENST00000367287 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.577e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-222ENST00000592763 3866 ntTSL 5 BASIC11.36□□□□□ -0.597e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-202ENST00000428130 1064 ntTSL 2 BASIC10.91□□□□□ -0.667e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-210ENST00000557331 553 ntTSL 410.7□□□□□ -0.77e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-209ENST00000557273 562 ntTSL 310.54□□□□□ -0.727e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-201ENST00000330854 3629 ntTSL 1 (best)10.46□□□□□ -0.737e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-206ENST00000594773 4169 ntTSL 210.37□□□□□ -0.757e-6■■□□□ 11.9
WDR3Q9UNX4 UGCG-204ENST00000490110 581 ntTSL 310.14□□□□□ -0.797e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.797e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-211ENST00000589052 637 ntTSL 59.74□□□□□ -0.857e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-205ENST00000553816 1163 ntTSL 28.64□□□□□ -1.037e-6■■□□□ 11.9
WDR3Q9UNX4 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC8.51□□□□□ -1.057e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.45□□□□□ -1.227e-6■■□□□ 11.9
WDR3Q9UNX4 TIMM17A-202ENST00000478378 821 ntTSL 37.15□□□□□ -1.267e-6■■□□□ 11.9
WDR3Q9UNX4 TOP2A-204ENST00000578412 882 ntTSL 25.09□□□□□ -1.597e-6■■□□□ 11.9
WDR3Q9UNX4 UGCG-205ENST00000495085 772 ntTSL 35.05□□□□□ -1.67e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-208ENST00000556692 801 ntTSL 23.95□□□□□ -1.787e-6■■□□□ 11.9
WDR3Q9UNX4 TOP2A-202ENST00000577541 420 ntTSL 23.89□□□□□ -1.797e-6■■□□□ 11.9
WDR3Q9UNX4 SRSF1-206ENST00000583741 1465 ntTSL 521.31■■□□□ 15e-6■■□□□ 11.8
WDR3Q9UNX4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.9■□□□□ 0.625e-6■■□□□ 11.8
WDR3Q9UNX4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.73■□□□□ 0.595e-6■■□□□ 11.8
WDR3Q9UNX4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.555e-6■■□□□ 11.8
WDR3Q9UNX4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.545e-6■■□□□ 11.8
WDR3Q9UNX4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.245e-6■■□□□ 11.8
WDR3Q9UNX4 GYPC-205ENST00000464053 1805 ntTSL 1 (best)16.4■□□□□ 0.225e-6■■□□□ 11.8
WDR3Q9UNX4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.045e-6■■□□□ 11.8
WDR3Q9UNX4 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC14.35□□□□□ -0.115e-6■■□□□ 11.8
WDR3Q9UNX4 SRSF1-202ENST00000578430 689 ntTSL 214.26□□□□□ -0.135e-6■■□□□ 11.8
WDR3Q9UNX4 SRSF1-204ENST00000581979 1720 ntTSL 1 (best)13.28□□□□□ -0.285e-6■■□□□ 11.8
WDR3Q9UNX4 OAZ1-205ENST00000589361 679 ntTSL 1 (best)16.92■□□□□ 0.35e-8■■□□□ 11.7
WDR3Q9UNX4 RN7SKP255-201ENST00000363442 313 ntBASIC14.13□□□□□ -0.152e-6■■□□□ 11.5
WDR3Q9UNX4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.953e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.713e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.683e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.593e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.543e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.543e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.163e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.163e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.093e-29■□□□□ 11.2
WDR3Q9UNX4 SNORD48-201ENST00000364953 64 ntBASIC1.84□□□□□ -2.113e-29■□□□□ 11.2
WDR3Q9UNX4 SDHAP2-201ENST00000455183 2001 ntBASIC19.54■□□□□ 0.723e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-207ENST00000429897 2131 ntTSL 218.86■□□□□ 0.613e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-201ENST00000414625 729 ntTSL 516.7■□□□□ 0.263e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-242ENST00000601648 745 ntTSL 314.79□□□□□ -0.043e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-313ENST00000628917 490 ntTSL 514.78□□□□□ -0.043e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.78□□□□□ -0.043e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-244ENST00000602127 749 ntTSL 514.78□□□□□ -0.043e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-217ENST00000451982 1161 ntTSL 514.31□□□□□ -0.123e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC14.16□□□□□ -0.143e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-276ENST00000626706 608 ntTSL 513.82□□□□□ -0.23e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC13.16□□□□□ -0.33e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-320ENST00000629823 869 ntTSL 512.74□□□□□ -0.373e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-212ENST00000445430 4208 ntTSL 1 (best) BASIC12.58□□□□□ -0.43e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-264ENST00000626089 792 ntTSL 512.46□□□□□ -0.413e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-297ENST00000627767 929 ntTSL 2 BASIC12.46□□□□□ -0.413e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-296ENST00000627718 510 ntTSL 511.72□□□□□ -0.533e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-230ENST00000597034 731 ntTSL 511.26□□□□□ -0.613e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-261ENST00000625882 484 ntTSL 59.63□□□□□ -0.873e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-290ENST00000627502 874 ntTSL 59.12□□□□□ -0.953e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-246ENST00000608699 415 ntTSL 58.77□□□□□ -1.013e-8■□□□□ 11.1
Retrieved 100 of 1,750 protein–RNA pairs in 38.5 ms