RNA–Protein interactions for RNA: ENST00000396819.7

LTBP4-205, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-205ENST00000396819 NISCHQ9Y2I1 1504 aa31.37■■■□□ 2.61
LTBP4-205ENST00000396819 DCAF8L2P0C7V8 631 aa31.06■■■□□ 2.56
LTBP4-205ENST00000396819 SHROOM4Q9ULL8 1493 aa28.95■■■□□ 2.22
LTBP4-205ENST00000396819 SUPT5HO00267 1087 aaKnown RBP28.93■■■□□ 2.22
LTBP4-205ENST00000396819 EHMT2Q96KQ7 1210 aa27.58■■■□□ 2.01
LTBP4-205ENST00000396819 ABCC9O60706 1549 aa27.27■■□□□ 1.96
LTBP4-205ENST00000396819 FAM9AQ8IZU1 332 aaPredicted RBP27.17■■□□□ 1.94
LTBP4-205ENST00000396819 TRIM41Q8WV44 630 aa26.92■■□□□ 1.9
LTBP4-205ENST00000396819 APLP2Q06481 763 aa26.9■■□□□ 1.9
LTBP4-205ENST00000396819 PABPN1Q86U42 306 aaKnown RBP eCLIP26.78■■□□□ 1.88
LTBP4-205ENST00000396819 RANGAP1P46060 587 aaPredicted RBP26.68■■□□□ 1.86
LTBP4-205ENST00000396819 UBTFP17480 764 aaKnown RBP26.47■■□□□ 1.83
LTBP4-205ENST00000396819 TTBK1Q5TCY1 1321 aaPredicted RBP26.46■■□□□ 1.83
LTBP4-205ENST00000396819 ATP1B4Q9UN42 357 aaPredicted RBP26.38■■□□□ 1.81
LTBP4-205ENST00000396819 CCDC180Q9P1Z9 1646 aa26.06■■□□□ 1.76
LTBP4-205ENST00000396819 PCGF6Q9BYE7 350 aa25.98■■□□□ 1.75
LTBP4-205ENST00000396819 ZCCHC6Q5VYS8 1495 aaKnown RBP25.94■■□□□ 1.74
LTBP4-205ENST00000396819 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
LTBP4-205ENST00000396819 SCRIBQ14160 1630 aa25.82■■□□□ 1.72
LTBP4-205ENST00000396819 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.73■■□□□ 1.71
LTBP4-205ENST00000396819 HNRNPUL2Q1KMD3 747 aaKnown RBP25.73■■□□□ 1.71
LTBP4-205ENST00000396819 PPARGC1BQ86YN6 1023 aaKnown RBP25.7■■□□□ 1.7
LTBP4-205ENST00000396819 LOC105371045A0A1W2PR82 267 aa25.68■■□□□ 1.7
LTBP4-205ENST00000396819 CCER1Q8TC90 406 aaPredicted RBP25.56■■□□□ 1.68
LTBP4-205ENST00000396819 RB1CC1Q8TDY2 1594 aa25.54■■□□□ 1.68
LTBP4-205ENST00000396819 MYT1LQ9UL68 1186 aa25.43■■□□□ 1.66
LTBP4-205ENST00000396819 FBLN2P98095 1184 aa25.4■■□□□ 1.66
LTBP4-205ENST00000396819 ITGAEP38570 1179 aa25.36■■□□□ 1.65
LTBP4-205ENST00000396819 NACADO15069 1562 aa25.34■■□□□ 1.65
LTBP4-205ENST00000396819 ZEB1P37275 1124 aaPredicted RBP25.26■■□□□ 1.63
LTBP4-205ENST00000396819 TRIM26Q12899 539 aaPredicted RBP25.2■■□□□ 1.62
LTBP4-205ENST00000396819 CSRNP3Q8WYN3 585 aa25.07■■□□□ 1.6
LTBP4-205ENST00000396819 P3H3Q8IVL6 736 aa24.93■■□□□ 1.58
LTBP4-205ENST00000396819 DCAF1Q9Y4B6 1507 aa24.93■■□□□ 1.58
LTBP4-205ENST00000396819 FAM50AQ14320 339 aaKnown RBP24.9■■□□□ 1.58
LTBP4-205ENST00000396819 RSF1Q96T23 1441 aaPredicted RBP24.88■■□□□ 1.57
LTBP4-205ENST00000396819 ARID3CA6NKF2 412 aa24.8■■□□□ 1.56
LTBP4-205ENST00000396819 BAZ1BQ9UIG0 1483 aaKnown RBP24.76■■□□□ 1.55
LTBP4-205ENST00000396819 PELP1Q8IZL8 1130 aaKnown RBP24.71■■□□□ 1.55
LTBP4-205ENST00000396819 CECR2Q9BXF3 1484 aa24.65■■□□□ 1.54
LTBP4-205ENST00000396819 TRIM52Q96A61 297 aa24.63■■□□□ 1.53
LTBP4-205ENST00000396819 BAZ1AQ9NRL2 1556 aaPredicted RBP24.61■■□□□ 1.53
LTBP4-205ENST00000396819 POLR3GLQ9BT43 218 aa24.61■■□□□ 1.53
LTBP4-205ENST00000396819 CHMP7Q8WUX9 453 aaPredicted RBP24.58■■□□□ 1.53
LTBP4-205ENST00000396819 CDK11AQ9UQ88 783 aaPredicted RBP24.57■■□□□ 1.52
LTBP4-205ENST00000396819 CENPBP07199 599 aaPredicted RBP24.49■■□□□ 1.51
LTBP4-205ENST00000396819 NPM1P06748 294 aaKnown RBP eCLIP24.49■■□□□ 1.51
LTBP4-205ENST00000396819 ZNF777Q9ULD5 760 aaPredicted RBP24.47■■□□□ 1.51
LTBP4-205ENST00000396819 MYO15BQ96JP2 1530 aa24.4■■□□□ 1.5
LTBP4-205ENST00000396819 ERCC6Q03468 1493 aa24.4■■□□□ 1.5
LTBP4-205ENST00000396819 WRNQ14191 1432 aaPredicted RBP eCLIP24.39■■□□□ 1.5
LTBP4-205ENST00000396819 HRCP23327 699 aa24.36■■□□□ 1.49
LTBP4-205ENST00000396819 NEUROD1Q13562 356 aa24.34■■□□□ 1.49
LTBP4-205ENST00000396819 YTHDC1Q96MU7 727 aaKnown RBP24.34■■□□□ 1.49
LTBP4-205ENST00000396819 CNGB1Q14028 1251 aaPredicted RBP24.33■■□□□ 1.48
LTBP4-205ENST00000396819 MROH2BQ7Z745 1585 aa24.28■■□□□ 1.48
LTBP4-205ENST00000396819 SLC4A1APQ9BWU0 796 aaKnown RBP24.27■■□□□ 1.48
LTBP4-205ENST00000396819 ZNF326Q5BKZ1 582 aaKnown RBP24.21■■□□□ 1.47
LTBP4-205ENST00000396819 KIF27Q86VH2 1401 aa24.18■■□□□ 1.46
LTBP4-205ENST00000396819 SMARCA2P51531 1590 aa24.17■■□□□ 1.46
LTBP4-205ENST00000396819 EEA1Q15075 1411 aa24.16■■□□□ 1.46
LTBP4-205ENST00000396819 NEFLP07196 543 aa24.12■■□□□ 1.45
LTBP4-205ENST00000396819 ESF1Q9H501 851 aaKnown RBP24.1■■□□□ 1.45
LTBP4-205ENST00000396819 CLIP1P30622 1438 aa24.1■■□□□ 1.45
LTBP4-205ENST00000396819 CCDC88BA6NC98 1476 aa24.06■■□□□ 1.44
LTBP4-205ENST00000396819 MTUS2Q5JR59 1369 aa24.06■■□□□ 1.44
LTBP4-205ENST00000396819 PDS5BQ9NTI5 1447 aa24.04■■□□□ 1.44
LTBP4-205ENST00000396819 BCANQ96GW7 911 aa24.02■■□□□ 1.44
LTBP4-205ENST00000396819 KCNH8Q96L42 1107 aa24■■□□□ 1.43
LTBP4-205ENST00000396819 GOLGA3Q08378 1498 aa24■■□□□ 1.43
LTBP4-205ENST00000396819 CHIC2Q9UKJ5 165 aa23.99■■□□□ 1.43
LTBP4-205ENST00000396819 TSPY4P0CV99 314 aa23.98■■□□□ 1.43
LTBP4-205ENST00000396819 TSPY10P0CW01 314 aa23.98■■□□□ 1.43
LTBP4-205ENST00000396819 PLEKHD1A6NEE1 506 aa23.97■■□□□ 1.43
LTBP4-205ENST00000396819 ATAD2BQ9ULI0 1458 aa23.94■■□□□ 1.42
LTBP4-205ENST00000396819 CUX2O14529 1486 aa23.92■■□□□ 1.42
LTBP4-205ENST00000396819 PLPPR3Q6T4P5 718 aa23.91■■□□□ 1.42
LTBP4-205ENST00000396819 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
LTBP4-205ENST00000396819 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
LTBP4-205ENST00000396819 CHGAP10645 457 aaKnown RBP23.87■■□□□ 1.41
LTBP4-205ENST00000396819 CARMIL1Q5VZK9 1371 aa23.86■■□□□ 1.41
LTBP4-205ENST00000396819 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.86■■□□□ 1.41
LTBP4-205ENST00000396819 WIZO95785 1651 aa23.86■■□□□ 1.41
LTBP4-205ENST00000396819 CEP162Q5TB80 1403 aa23.86■■□□□ 1.41
LTBP4-205ENST00000396819 STAG3Q9UJ98 1225 aa23.85■■□□□ 1.41
LTBP4-205ENST00000396819 DIEXFQ68CQ4 756 aaKnown RBP23.83■■□□□ 1.41
LTBP4-205ENST00000396819 TOP2AP11388 1531 aaKnown RBP23.82■■□□□ 1.4
LTBP4-205ENST00000396819 TDRD9Q8NDG6 1382 aaKnown RBP23.8■■□□□ 1.4
LTBP4-205ENST00000396819 TNIKQ9UKE5 1360 aa23.79■■□□□ 1.4
LTBP4-205ENST00000396819 SOGA1O94964 1423 aa23.79■■□□□ 1.4
LTBP4-205ENST00000396819 SMARCA4P51532 1647 aa23.76■■□□□ 1.39
LTBP4-205ENST00000396819 ABCC8Q09428 1581 aa23.72■■□□□ 1.39
LTBP4-205ENST00000396819 CFDP1Q9UEE9 299 aaPredicted RBP23.7■■□□□ 1.38
LTBP4-205ENST00000396819 TONSLQ96HA7 1378 aa23.67■■□□□ 1.38
LTBP4-205ENST00000396819 RRP7BPQ9NSQ0 103 aa23.66■■□□□ 1.38
LTBP4-205ENST00000396819 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
LTBP4-205ENST00000396819 ANP32CO43423 234 aa23.62■■□□□ 1.37
LTBP4-205ENST00000396819 ZNF316A6NFI3 1004 aaPredicted RBP23.58■■□□□ 1.36
LTBP4-205ENST00000396819 ERICH6Q7L0X2 663 aa23.56■■□□□ 1.36
LTBP4-205ENST00000396819 FANCD2Q9BXW9 1451 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms