RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 NISCHQ9Y2I1 1504 aa44.61■■■■■ 4.73
SRSF1-208ENST00000584773 CCDC180Q9P1Z9 1646 aa39.8■■■■□ 3.96
SRSF1-208ENST00000584773 ABCC9O60706 1549 aa39.48■■■■□ 3.91
SRSF1-208ENST00000584773 RB1CC1Q8TDY2 1594 aa37.67■■■■□ 3.62
SRSF1-208ENST00000584773 NACADO15069 1562 aa37.5■■■■□ 3.59
SRSF1-208ENST00000584773 DCAF8L2P0C7V8 631 aa37.5■■■■□ 3.59
SRSF1-208ENST00000584773 ZCCHC6Q5VYS8 1495 aaKnown RBP37.08■■■■□ 3.53
SRSF1-208ENST00000584773 MYO15BQ96JP2 1530 aa37.08■■■■□ 3.53
SRSF1-208ENST00000584773 UNC13AQ9UPW8 1703 aa36.96■■■■□ 3.51
SRSF1-208ENST00000584773 PABPN1Q86U42 306 aaKnown RBP eCLIP36.84■■■■□ 3.49
SRSF1-208ENST00000584773 DCAF1Q9Y4B6 1507 aa36.8■■■■□ 3.48
SRSF1-208ENST00000584773 DNAJC5BQ9UF47 199 aa36.66■■■■□ 3.46
SRSF1-208ENST00000584773 BICRAQ9NZM4 1560 aa36.65■■■■□ 3.46
SRSF1-208ENST00000584773 SCRIBQ14160 1630 aa36.42■■■■□ 3.42
SRSF1-208ENST00000584773 SHROOM4Q9ULL8 1493 aa36.02■■■■□ 3.36
SRSF1-208ENST00000584773 EIF4G1Q04637 1599 aaKnown RBP35.68■■■■□ 3.3
SRSF1-208ENST00000584773 CC2D2AQ9P2K1 1620 aa35.67■■■■□ 3.3
SRSF1-208ENST00000584773 CECR2Q9BXF3 1484 aa35.47■■■■□ 3.27
SRSF1-208ENST00000584773 SMARCA4P51532 1647 aa34.73■■■■□ 3.15
SRSF1-208ENST00000584773 ATAD2BQ9ULI0 1458 aa34.63■■■■□ 3.13
SRSF1-208ENST00000584773 NCAPD3P42695 1498 aa34.62■■■■□ 3.13
SRSF1-208ENST00000584773 BAZ1AQ9NRL2 1556 aaPredicted RBP34.57■■■■□ 3.12
SRSF1-208ENST00000584773 SMARCA2P51531 1590 aa34.51■■■■□ 3.11
SRSF1-208ENST00000584773 MROH2BQ7Z745 1585 aa34.44■■■■□ 3.1
SRSF1-208ENST00000584773 HMGXB3Q12766 1538 aa34.42■■■■□ 3.1
SRSF1-208ENST00000584773 PEG3Q9GZU2 1588 aa34.33■■■■□ 3.09
SRSF1-208ENST00000584773 BAZ1BQ9UIG0 1483 aaKnown RBP34.31■■■■□ 3.08
SRSF1-208ENST00000584773 WIZO95785 1651 aa34.07■■■■□ 3.05
SRSF1-208ENST00000584773 NESP48681 1621 aa34.07■■■■□ 3.05
SRSF1-208ENST00000584773 ERCC6Q03468 1493 aa34■■■■□ 3.03
SRSF1-208ENST00000584773 RSF1Q96T23 1441 aaPredicted RBP33.84■■■■□ 3.01
SRSF1-208ENST00000584773 LAMC3Q9Y6N6 1575 aa33.78■■■■□ 3
SRSF1-208ENST00000584773 CUX2O14529 1486 aa33.73■■■□□ 2.99
SRSF1-208ENST00000584773 KIF21AQ7Z4S6 1674 aa33.64■■■□□ 2.98
SRSF1-208ENST00000584773 TOP2AP11388 1531 aaKnown RBP33.6■■■□□ 2.97
SRSF1-208ENST00000584773 CADPSQ9ULU8 1353 aa33.6■■■□□ 2.97
SRSF1-208ENST00000584773 THOC2Q8NI27 1593 aaKnown RBP33.6■■■□□ 2.97
SRSF1-208ENST00000584773 PDS5BQ9NTI5 1447 aa33.54■■■□□ 2.96
SRSF1-208ENST00000584773 CFTRP13569 1480 aa33.32■■■□□ 2.92
SRSF1-208ENST00000584773 MRC2Q9UBG0 1479 aa33.29■■■□□ 2.92
SRSF1-208ENST00000584773 FANCD2Q9BXW9 1451 aa33.26■■■□□ 2.92
SRSF1-208ENST00000584773 CEP164Q9UPV0 1460 aa33.25■■■□□ 2.91
SRSF1-208ENST00000584773 CCDC88BA6NC98 1476 aa33.23■■■□□ 2.91
SRSF1-208ENST00000584773 DNAJC5Q9H3Z4 198 aa33.22■■■□□ 2.91
SRSF1-208ENST00000584773 WDR62O43379 1518 aa33.19■■■□□ 2.9
SRSF1-208ENST00000584773 PRDM2Q13029 1718 aa33.07■■■□□ 2.88
SRSF1-208ENST00000584773 URB2Q14146 1524 aaKnown RBP32.99■■■□□ 2.87
SRSF1-208ENST00000584773 SUPT5HO00267 1087 aaKnown RBP32.73■■■□□ 2.83
SRSF1-208ENST00000584773 TOPBP1Q92547 1522 aa32.7■■■□□ 2.82
SRSF1-208ENST00000584773 DNMBPQ6XZF7 1577 aa32.6■■■□□ 2.81
SRSF1-208ENST00000584773 ZNF608Q9ULD9 1512 aaPredicted RBP32.54■■■□□ 2.8
SRSF1-208ENST00000584773 IFT140Q96RY7 1462 aa32.54■■■□□ 2.8
SRSF1-208ENST00000584773 ABCC8Q09428 1581 aa32.53■■■□□ 2.8
SRSF1-208ENST00000584773 POLA1P09884 1462 aaPredicted RBP32.39■■■□□ 2.78
SRSF1-208ENST00000584773 TARBP1Q13395 1621 aaKnown RBP32.38■■■□□ 2.77
SRSF1-208ENST00000584773 EIF4G3O43432 1585 aaKnown RBP32.37■■■□□ 2.77
SRSF1-208ENST00000584773 CUX1P39880 1505 aa32.33■■■□□ 2.77
SRSF1-208ENST00000584773 RAD54L2Q9Y4B4 1467 aa32.31■■■□□ 2.76
SRSF1-208ENST00000584773 AQRO60306 1485 aaKnown RBP eCLIP32.28■■■□□ 2.767e-10■■■■■ 31
SRSF1-208ENST00000584773 FGD5Q6ZNL6 1462 aa32.27■■■□□ 2.76
SRSF1-208ENST00000584773 OSCARQ8IYS5 282 aa32.26■■■□□ 2.75
SRSF1-208ENST00000584773 SOGA1O94964 1423 aa32.22■■■□□ 2.75
SRSF1-208ENST00000584773 TDRD9Q8NDG6 1382 aaKnown RBP32.14■■■□□ 2.74
SRSF1-208ENST00000584773 CHD1O14646 1710 aa32.07■■■□□ 2.72
SRSF1-208ENST00000584773 TRIM41Q8WV44 630 aa32.04■■■□□ 2.72
SRSF1-208ENST00000584773 WDR97A6NE52 1622 aa32.03■■■□□ 2.72
SRSF1-208ENST00000584773 SNAPC4Q5SXM2 1469 aa31.97■■■□□ 2.71
SRSF1-208ENST00000584773 FBLN2P98095 1184 aa31.96■■■□□ 2.71
SRSF1-208ENST00000584773 SYNJ1O43426 1573 aa31.92■■■□□ 2.7
SRSF1-208ENST00000584773 RIMBP3CA6NJZ7 1639 aa31.9■■■□□ 2.7
SRSF1-208ENST00000584773 RIMBP3BA6NNM3 1639 aa31.9■■■□□ 2.7
SRSF1-208ENST00000584773 WRNQ14191 1432 aaPredicted RBP eCLIP31.9■■■□□ 2.7
SRSF1-208ENST00000584773 RIMBP3Q9UFD9 1639 aa31.9■■■□□ 2.7
SRSF1-208ENST00000584773 BIVM-ERCC5R4GMW8 1640 aa31.89■■■□□ 2.7
SRSF1-208ENST00000584773 TOP2BQ02880 1626 aa31.88■■■□□ 2.69
SRSF1-208ENST00000584773 ABCA10Q8WWZ4 1543 aa31.87■■■□□ 2.69
SRSF1-208ENST00000584773 GRIN2BQ13224 1484 aa31.87■■■□□ 2.69
SRSF1-208ENST00000584773 PBRM1Q86U86 1689 aa31.86■■■□□ 2.69
SRSF1-208ENST00000584773 GAPVD1Q14C86 1478 aa31.84■■■□□ 2.69
SRSF1-208ENST00000584773 ABCA5Q8WWZ7 1642 aa31.84■■■□□ 2.69
SRSF1-208ENST00000584773 ARHGEF11O15085 1522 aa31.82■■■□□ 2.68
SRSF1-208ENST00000584773 MAGI1Q96QZ7 1491 aaPredicted RBP31.82■■■□□ 2.68
SRSF1-208ENST00000584773 CHMP7Q8WUX9 453 aaPredicted RBP31.75■■■□□ 2.67
SRSF1-208ENST00000584773 SYNJ2O15056 1496 aa31.72■■■□□ 2.67
SRSF1-208ENST00000584773 CLASP1Q7Z460 1538 aa31.66■■■□□ 2.66
SRSF1-208ENST00000584773 ADAMTS12P58397 1594 aa31.57■■■□□ 2.64
SRSF1-208ENST00000584773 ARAP1Q96P48 1450 aa31.56■■■□□ 2.64
SRSF1-208ENST00000584773 CYB5RLQ6IPT4 315 aa31.54■■■□□ 2.64
SRSF1-208ENST00000584773 GRIN2AQ12879 1464 aa31.49■■■□□ 2.63
SRSF1-208ENST00000584773 ERICH3Q5RHP9 1530 aa31.46■■■□□ 2.63
SRSF1-208ENST00000584773 FHAD1B1AJZ9 1412 aa31.43■■■□□ 2.62
SRSF1-208ENST00000584773 CEP170Q5SW79 1584 aa31.42■■■□□ 2.62
SRSF1-208ENST00000584773 NUP160Q12769 1436 aa31.36■■■□□ 2.61
SRSF1-208ENST00000584773 ERCC6L2Q5T890 1561 aa31.29■■■□□ 2.6
SRSF1-208ENST00000584773 KIF27Q86VH2 1401 aa31.23■■■□□ 2.59
SRSF1-208ENST00000584773 IGF1RP08069 1367 aa31.19■■■□□ 2.58
SRSF1-208ENST00000584773 SHROOM2Q13796 1616 aa31.19■■■□□ 2.58
SRSF1-208ENST00000584773 RUSC2Q8N2Y8 1516 aa31.12■■■□□ 2.57
SRSF1-208ENST00000584773 CUL7Q14999 1698 aa31.12■■■□□ 2.57
SRSF1-208ENST00000584773 TRHP20396 242 aaPredicted RBP31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms