RNA–Protein interactions for RNA: ENST00000587505.5

ILF3-206, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 5

Gene ILF3, Length 791 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-206ENST00000587505 NISCHQ9Y2I1 1504 aa38.79■■■■□ 3.8
ILF3-206ENST00000587505 ABCC9O60706 1549 aa34.96■■■■□ 3.19
ILF3-206ENST00000587505 CCDC180Q9P1Z9 1646 aa34.88■■■■□ 3.17
ILF3-206ENST00000587505 RB1CC1Q8TDY2 1594 aa33.22■■■□□ 2.91
ILF3-206ENST00000587505 DNAJC5BQ9UF47 199 aa33■■■□□ 2.87
ILF3-206ENST00000587505 NACADO15069 1562 aa32.97■■■□□ 2.87
ILF3-206ENST00000587505 DCAF8L2P0C7V8 631 aa32.65■■■□□ 2.82
ILF3-206ENST00000587505 UNC13AQ9UPW8 1703 aa32.57■■■□□ 2.81
ILF3-206ENST00000587505 PABPN1Q86U42 306 aaKnown RBP eCLIP32.51■■■□□ 2.795e-10■□□□□ 8.4
ILF3-206ENST00000587505 MYO15BQ96JP2 1530 aa32.51■■■□□ 2.79
ILF3-206ENST00000587505 BICRAQ9NZM4 1560 aa32.36■■■□□ 2.77
ILF3-206ENST00000587505 ZCCHC6Q5VYS8 1495 aaKnown RBP32.12■■■□□ 2.73
ILF3-206ENST00000587505 DCAF1Q9Y4B6 1507 aa32.05■■■□□ 2.72
ILF3-206ENST00000587505 SHROOM4Q9ULL8 1493 aa31.83■■■□□ 2.69
ILF3-206ENST00000587505 SCRIBQ14160 1630 aa31.73■■■□□ 2.67
ILF3-206ENST00000587505 CC2D2AQ9P2K1 1620 aa31.61■■■□□ 2.65
ILF3-206ENST00000587505 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.64
ILF3-206ENST00000587505 CECR2Q9BXF3 1484 aa31.51■■■□□ 2.63
ILF3-206ENST00000587505 NCAPD3P42695 1498 aa30.46■■■□□ 2.47
ILF3-206ENST00000587505 ATAD2BQ9ULI0 1458 aa30.35■■■□□ 2.45
ILF3-206ENST00000587505 DNAJC5Q9H3Z4 198 aa30.34■■■□□ 2.45
ILF3-206ENST00000587505 SMARCA4P51532 1647 aa30.29■■■□□ 2.44
ILF3-206ENST00000587505 HMGXB3Q12766 1538 aa30.22■■■□□ 2.43
ILF3-206ENST00000587505 SMARCA2P51531 1590 aa30.22■■■□□ 2.43
ILF3-206ENST00000587505 CUX2O14529 1486 aa30.19■■■□□ 2.42
ILF3-206ENST00000587505 ERCC6Q03468 1493 aa30.14■■■□□ 2.42
ILF3-206ENST00000587505 BAZ1AQ9NRL2 1556 aaPredicted RBP30.08■■■□□ 2.41
ILF3-206ENST00000587505 NESP48681 1621 aa30.04■■■□□ 2.4
ILF3-206ENST00000587505 PEG3Q9GZU2 1588 aa30.02■■■□□ 2.4
ILF3-206ENST00000587505 BAZ1BQ9UIG0 1483 aaKnown RBP29.99■■■□□ 2.39
ILF3-206ENST00000587505 MROH2BQ7Z745 1585 aa29.9■■■□□ 2.38
ILF3-206ENST00000587505 THOC2Q8NI27 1593 aaKnown RBP29.78■■■□□ 2.36
ILF3-206ENST00000587505 LAMC3Q9Y6N6 1575 aa29.78■■■□□ 2.36
ILF3-206ENST00000587505 KIF21AQ7Z4S6 1674 aa29.66■■■□□ 2.34
ILF3-206ENST00000587505 PDS5BQ9NTI5 1447 aa29.56■■■□□ 2.32
ILF3-206ENST00000587505 WIZO95785 1651 aa29.53■■■□□ 2.32
ILF3-206ENST00000587505 CADPSQ9ULU8 1353 aa29.5■■■□□ 2.31
ILF3-206ENST00000587505 MRC2Q9UBG0 1479 aa29.36■■■□□ 2.29
ILF3-206ENST00000587505 WDR62O43379 1518 aa29.32■■■□□ 2.28
ILF3-206ENST00000587505 RSF1Q96T23 1441 aaPredicted RBP29.21■■■□□ 2.27
ILF3-206ENST00000587505 CEP164Q9UPV0 1460 aa29.2■■■□□ 2.26
ILF3-206ENST00000587505 CFTRP13569 1480 aa29.17■■■□□ 2.26
ILF3-206ENST00000587505 FANCD2Q9BXW9 1451 aa29.17■■■□□ 2.26
ILF3-206ENST00000587505 TOP2AP11388 1531 aaKnown RBP29.13■■■□□ 2.25
ILF3-206ENST00000587505 URB2Q14146 1524 aaKnown RBP28.98■■■□□ 2.23
ILF3-206ENST00000587505 PRDM2Q13029 1718 aa28.89■■■□□ 2.21
ILF3-206ENST00000587505 TRIM41Q8WV44 630 aa28.88■■■□□ 2.21
ILF3-206ENST00000587505 CCDC88BA6NC98 1476 aa28.8■■■□□ 2.2
ILF3-206ENST00000587505 OSCARQ8IYS5 282 aa28.74■■■□□ 2.19
ILF3-206ENST00000587505 ZNF608Q9ULD9 1512 aaPredicted RBP28.64■■■□□ 2.17
ILF3-206ENST00000587505 IFT140Q96RY7 1462 aa28.62■■■□□ 2.17
ILF3-206ENST00000587505 TOPBP1Q92547 1522 aa28.62■■■□□ 2.17
ILF3-206ENST00000587505 ABCC8Q09428 1581 aa28.5■■■□□ 2.15
ILF3-206ENST00000587505 DNMBPQ6XZF7 1577 aa28.5■■■□□ 2.15
ILF3-206ENST00000587505 RIMBP3CA6NJZ7 1639 aa28.47■■■□□ 2.15
ILF3-206ENST00000587505 RIMBP3BA6NNM3 1639 aa28.47■■■□□ 2.15
ILF3-206ENST00000587505 RIMBP3Q9UFD9 1639 aa28.47■■■□□ 2.15
ILF3-206ENST00000587505 EIF4G3O43432 1585 aaKnown RBP28.46■■■□□ 2.15
ILF3-206ENST00000587505 TARBP1Q13395 1621 aaKnown RBP28.42■■■□□ 2.14
ILF3-206ENST00000587505 ARHGEF11O15085 1522 aa28.35■■■□□ 2.13
ILF3-206ENST00000587505 AQRO60306 1485 aaKnown RBP eCLIP28.34■■■□□ 2.136e-9■■■■□ 19.5
ILF3-206ENST00000587505 POLA1P09884 1462 aaPredicted RBP28.32■■■□□ 2.12
ILF3-206ENST00000587505 CHD1O14646 1710 aa28.29■■■□□ 2.12
ILF3-206ENST00000587505 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
ILF3-206ENST00000587505 SOGA1O94964 1423 aa28.15■■■□□ 2.1
ILF3-206ENST00000587505 TDRD9Q8NDG6 1382 aaKnown RBP28.12■■■□□ 2.09
ILF3-206ENST00000587505 FGD5Q6ZNL6 1462 aa28.11■■■□□ 2.09
ILF3-206ENST00000587505 CUX1P39880 1505 aa28.1■■■□□ 2.09
ILF3-206ENST00000587505 CYB5RLQ6IPT4 315 aa28.08■■■□□ 2.09
ILF3-206ENST00000587505 ARAP1Q96P48 1450 aa28.08■■■□□ 2.09
ILF3-206ENST00000587505 FBLN2P98095 1184 aa28.07■■■□□ 2.08
ILF3-206ENST00000587505 WDR97A6NE52 1622 aa28.07■■■□□ 2.08
ILF3-206ENST00000587505 SNAPC4Q5SXM2 1469 aa28.03■■■□□ 2.08
ILF3-206ENST00000587505 CLASP1Q7Z460 1538 aa27.97■■■□□ 2.07
ILF3-206ENST00000587505 MAGI1Q96QZ7 1491 aaPredicted RBP27.95■■■□□ 2.06
ILF3-206ENST00000587505 GRIN2BQ13224 1484 aa27.93■■■□□ 2.06
ILF3-206ENST00000587505 SYNJ1O43426 1573 aa27.87■■■□□ 2.05
ILF3-206ENST00000587505 CHMP7Q8WUX9 453 aaPredicted RBP27.86■■■□□ 2.05
ILF3-206ENST00000587505 SYNJ2O15056 1496 aa27.86■■■□□ 2.05
ILF3-206ENST00000587505 PBRM1Q86U86 1689 aa27.85■■■□□ 2.05
ILF3-206ENST00000587505 GAPVD1Q14C86 1478 aa27.82■■■□□ 2.04
ILF3-206ENST00000587505 ABCA5Q8WWZ7 1642 aa27.79■■■□□ 2.04
ILF3-206ENST00000587505 ABCA10Q8WWZ4 1543 aa27.79■■■□□ 2.04
ILF3-206ENST00000587505 TRHP20396 242 aaPredicted RBP27.76■■■□□ 2.03
ILF3-206ENST00000587505 SUPT5HO00267 1087 aaKnown RBP27.71■■■□□ 2.03
ILF3-206ENST00000587505 BIVM-ERCC5R4GMW8 1640 aa27.62■■■□□ 2.01
ILF3-206ENST00000587505 WRNQ14191 1432 aaPredicted RBP eCLIP27.6■■■□□ 2.01
ILF3-206ENST00000587505 TOP2BQ02880 1626 aa27.59■■■□□ 2.01
ILF3-206ENST00000587505 GRIN2AQ12879 1464 aa27.58■■■□□ 2.01
ILF3-206ENST00000587505 ADAMTS12P58397 1594 aa27.57■■■□□ 2
ILF3-206ENST00000587505 ERCC6L2Q5T890 1561 aa27.55■■■□□ 2
ILF3-206ENST00000587505 CEP170Q5SW79 1584 aa27.52■■■□□ 2
ILF3-206ENST00000587505 NUP160Q12769 1436 aa27.52■■■□□ 2
ILF3-206ENST00000587505 FHAD1B1AJZ9 1412 aa27.45■■□□□ 1.98
ILF3-206ENST00000587505 SHROOM2Q13796 1616 aa27.45■■□□□ 1.98
ILF3-206ENST00000587505 ERICH3Q5RHP9 1530 aa27.43■■□□□ 1.98
ILF3-206ENST00000587505 PRG4Q92954 1404 aaPredicted RBP27.22■■□□□ 1.95
ILF3-206ENST00000587505 RUSC2Q8N2Y8 1516 aa27.2■■□□□ 1.94
ILF3-206ENST00000587505 JPH4Q96JJ6 628 aa27.18■■□□□ 1.94
ILF3-206ENST00000587505 KIF13AQ9H1H9 1805 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms