RNA–Protein interactions for RNA: ENST00000204005.13

LTBP4-201, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 5,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-201ENST00000204005 NISCHQ9Y2I1 1504 aa34.31■■■■□ 3.08
LTBP4-201ENST00000204005 DCAF8L2P0C7V8 631 aa33.74■■■□□ 2.99
LTBP4-201ENST00000204005 SUPT5HO00267 1087 aaKnown RBP32.06■■■□□ 2.72
LTBP4-201ENST00000204005 SHROOM4Q9ULL8 1493 aa31.86■■■□□ 2.69
LTBP4-201ENST00000204005 EHMT2Q96KQ7 1210 aa30.45■■■□□ 2.47
LTBP4-201ENST00000204005 FAM9AQ8IZU1 332 aaPredicted RBP30.06■■■□□ 2.4
LTBP4-201ENST00000204005 APLP2Q06481 763 aa29.96■■■□□ 2.39
LTBP4-201ENST00000204005 TRIM41Q8WV44 630 aa29.85■■■□□ 2.37
LTBP4-201ENST00000204005 PCGF6Q9BYE7 350 aa29.81■■■□□ 2.36
LTBP4-201ENST00000204005 TTBK1Q5TCY1 1321 aaPredicted RBP29.38■■■□□ 2.29
LTBP4-201ENST00000204005 RANGAP1P46060 587 aaPredicted RBP29.31■■■□□ 2.28
LTBP4-201ENST00000204005 UBTFP17480 764 aaKnown RBP29.28■■■□□ 2.28
LTBP4-201ENST00000204005 ZEB1P37275 1124 aaPredicted RBP29.24■■■□□ 2.27
LTBP4-201ENST00000204005 ABCC9O60706 1549 aa29.22■■■□□ 2.27
LTBP4-201ENST00000204005 PELP1Q8IZL8 1130 aaKnown RBP29■■■□□ 2.23
LTBP4-201ENST00000204005 ATP1B4Q9UN42 357 aaPredicted RBP28.99■■■□□ 2.23
LTBP4-201ENST00000204005 CHIC1Q5VXU3 224 aa28.98■■■□□ 2.23
LTBP4-201ENST00000204005 HRCP23327 699 aa28.89■■■□□ 2.21
LTBP4-201ENST00000204005 CCER1Q8TC90 406 aaPredicted RBP28.86■■■□□ 2.21
LTBP4-201ENST00000204005 TRIM26Q12899 539 aaPredicted RBP28.78■■■□□ 2.2
LTBP4-201ENST00000204005 CENPBP07199 599 aaPredicted RBP28.75■■■□□ 2.19
LTBP4-201ENST00000204005 PABPN1Q86U42 306 aaKnown RBP eCLIP28.75■■■□□ 2.19
LTBP4-201ENST00000204005 LOC105371045A0A1W2PR82 267 aa28.63■■■□□ 2.17
LTBP4-201ENST00000204005 PPARGC1BQ86YN6 1023 aaKnown RBP28.58■■■□□ 2.17
LTBP4-201ENST00000204005 ZCCHC6Q5VYS8 1495 aaKnown RBP28.48■■■□□ 2.15
LTBP4-201ENST00000204005 CCDC180Q9P1Z9 1646 aa28.43■■■□□ 2.14
LTBP4-201ENST00000204005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.13■■■□□ 2.09
LTBP4-201ENST00000204005 HNRNPUL2Q1KMD3 747 aaKnown RBP28.13■■■□□ 2.09
LTBP4-201ENST00000204005 SCRIBQ14160 1630 aa28.1■■■□□ 2.09
LTBP4-201ENST00000204005 ITGAEP38570 1179 aa28.09■■■□□ 2.09
LTBP4-201ENST00000204005 YTHDC1Q96MU7 727 aaKnown RBP28.08■■■□□ 2.08
LTBP4-201ENST00000204005 MYT1Q01538 1121 aa27.76■■■□□ 2.03
LTBP4-201ENST00000204005 MYT1LQ9UL68 1186 aa27.75■■■□□ 2.03
LTBP4-201ENST00000204005 NEFLP07196 543 aa27.72■■■□□ 2.03
LTBP4-201ENST00000204005 CSRNP3Q8WYN3 585 aa27.7■■■□□ 2.03
LTBP4-201ENST00000204005 ERICH6Q7L0X2 663 aa27.67■■■□□ 2.02
LTBP4-201ENST00000204005 RB1CC1Q8TDY2 1594 aa27.64■■■□□ 2.02
LTBP4-201ENST00000204005 DIEXFQ68CQ4 756 aaKnown RBP27.6■■■□□ 2.01
LTBP4-201ENST00000204005 FAM50AQ14320 339 aaKnown RBP27.59■■■□□ 2.01
LTBP4-201ENST00000204005 NACADO15069 1562 aa27.51■■■□□ 2
LTBP4-201ENST00000204005 FBLN2P98095 1184 aa27.43■■□□□ 1.98
LTBP4-201ENST00000204005 DCAF1Q9Y4B6 1507 aa27.42■■□□□ 1.98
LTBP4-201ENST00000204005 POLR3GLQ9BT43 218 aa27.39■■□□□ 1.98
LTBP4-201ENST00000204005 RSF1Q96T23 1441 aaPredicted RBP27.33■■□□□ 1.97
LTBP4-201ENST00000204005 TRIM52Q96A61 297 aa27.29■■□□□ 1.96
LTBP4-201ENST00000204005 P3H3Q8IVL6 736 aa27.27■■□□□ 1.96
LTBP4-201ENST00000204005 NEUROD1Q13562 356 aa27.13■■□□□ 1.93
LTBP4-201ENST00000204005 GTF3C3Q9Y5Q9 886 aa27.1■■□□□ 1.93
LTBP4-201ENST00000204005 MYO15BQ96JP2 1530 aa27.08■■□□□ 1.93
LTBP4-201ENST00000204005 ZNF316A6NFI3 1004 aaPredicted RBP27.08■■□□□ 1.93
LTBP4-201ENST00000204005 CNGB1Q14028 1251 aaPredicted RBP27.04■■□□□ 1.92
LTBP4-201ENST00000204005 ARID3CA6NKF2 412 aa27.02■■□□□ 1.92
LTBP4-201ENST00000204005 CDK11AQ9UQ88 783 aaPredicted RBP27.01■■□□□ 1.91
LTBP4-201ENST00000204005 ACIN1Q9UKV3 1341 aaKnown RBP26.96■■□□□ 1.91
LTBP4-201ENST00000204005 BAZ1BQ9UIG0 1483 aaKnown RBP26.96■■□□□ 1.91
LTBP4-201ENST00000204005 BAZ1AQ9NRL2 1556 aaPredicted RBP26.94■■□□□ 1.9
LTBP4-201ENST00000204005 EEA1Q15075 1411 aa26.88■■□□□ 1.89
LTBP4-201ENST00000204005 CECR2Q9BXF3 1484 aa26.84■■□□□ 1.89
LTBP4-201ENST00000204005 SLC4A1APQ9BWU0 796 aaKnown RBP26.84■■□□□ 1.89
LTBP4-201ENST00000204005 WRNQ14191 1432 aaPredicted RBP eCLIP26.83■■□□□ 1.88
LTBP4-201ENST00000204005 ZNF326Q5BKZ1 582 aaKnown RBP26.81■■□□□ 1.88
LTBP4-201ENST00000204005 ZNF777Q9ULD5 760 aaPredicted RBP26.81■■□□□ 1.88
LTBP4-201ENST00000204005 CLIP1P30622 1438 aa26.75■■□□□ 1.87
LTBP4-201ENST00000204005 ANP32CO43423 234 aa26.7■■□□□ 1.86
LTBP4-201ENST00000204005 GOLGA3Q08378 1498 aa26.69■■□□□ 1.86
LTBP4-201ENST00000204005 CHMP7Q8WUX9 453 aaPredicted RBP26.62■■□□□ 1.85
LTBP4-201ENST00000204005 KIF27Q86VH2 1401 aa26.58■■□□□ 1.85
LTBP4-201ENST00000204005 CEP162Q5TB80 1403 aa26.58■■□□□ 1.85
LTBP4-201ENST00000204005 MTUS2Q5JR59 1369 aa26.56■■□□□ 1.84
LTBP4-201ENST00000204005 BCANQ96GW7 911 aa26.55■■□□□ 1.84
LTBP4-201ENST00000204005 MROH2BQ7Z745 1585 aa26.53■■□□□ 1.84
LTBP4-201ENST00000204005 TNIKQ9UKE5 1360 aa26.5■■□□□ 1.83
LTBP4-201ENST00000204005 NPM1P06748 294 aaKnown RBP eCLIP26.5■■□□□ 1.83
LTBP4-201ENST00000204005 CEP164Q9UPV0 1460 aa26.5■■□□□ 1.83
LTBP4-201ENST00000204005 DAXXQ9UER7 740 aaPredicted RBP26.49■■□□□ 1.83
LTBP4-201ENST00000204005 TONSLQ96HA7 1378 aa26.49■■□□□ 1.83
LTBP4-201ENST00000204005 CHIC2Q9UKJ5 165 aa26.42■■□□□ 1.82
LTBP4-201ENST00000204005 SCAF1Q9H7N4 1312 aaKnown RBP26.39■■□□□ 1.82
LTBP4-201ENST00000204005 CLSPNQ9HAW4 1339 aa26.38■■□□□ 1.81
LTBP4-201ENST00000204005 CCDC88BA6NC98 1476 aa26.35■■□□□ 1.81
LTBP4-201ENST00000204005 TSPY4P0CV99 314 aa26.35■■□□□ 1.81
LTBP4-201ENST00000204005 TSPY10P0CW01 314 aa26.35■■□□□ 1.81
LTBP4-201ENST00000204005 SMARCA2P51531 1590 aa26.34■■□□□ 1.81
LTBP4-201ENST00000204005 RTL5Q5HYW3 569 aaPredicted RBP26.24■■□□□ 1.79
LTBP4-201ENST00000204005 SOGA1O94964 1423 aa26.23■■□□□ 1.79
LTBP4-201ENST00000204005 ESF1Q9H501 851 aaKnown RBP26.22■■□□□ 1.79
LTBP4-201ENST00000204005 ERCC6Q03468 1493 aa26.21■■□□□ 1.79
LTBP4-201ENST00000204005 PLEKHD1A6NEE1 506 aa26.21■■□□□ 1.79
LTBP4-201ENST00000204005 MIER1Q8N108 512 aa26.18■■□□□ 1.78
LTBP4-201ENST00000204005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.17■■□□□ 1.78
LTBP4-201ENST00000204005 CUX2O14529 1486 aa26.17■■□□□ 1.78
LTBP4-201ENST00000204005 CHGAP10645 457 aaKnown RBP26.16■■□□□ 1.78
LTBP4-201ENST00000204005 TOP2AP11388 1531 aaKnown RBP26.16■■□□□ 1.78
LTBP4-201ENST00000204005 CARMIL1Q5VZK9 1371 aa26.15■■□□□ 1.78
LTBP4-201ENST00000204005 RRP7BPQ9NSQ0 103 aa26.12■■□□□ 1.77
LTBP4-201ENST00000204005 WIZO95785 1651 aa26.11■■□□□ 1.77
LTBP4-201ENST00000204005 DDX10Q13206 875 aaKnown RBP26.11■■□□□ 1.77
LTBP4-201ENST00000204005 ABCC8Q09428 1581 aa26.09■■□□□ 1.77
LTBP4-201ENST00000204005 FKBP8Q14318 412 aa26.08■■□□□ 1.77
LTBP4-201ENST00000204005 STAG3Q9UJ98 1225 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms