RNA–Protein interactions for RNA: ENST00000590009.5

ILF3-218, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 5

Gene ILF3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-218ENST00000590009 NISCHQ9Y2I1 1504 aa32.57■■■□□ 2.8
ILF3-218ENST00000590009 CCDC180Q9P1Z9 1646 aa28.86■■■□□ 2.21
ILF3-218ENST00000590009 ABCC9O60706 1549 aa28.14■■■□□ 2.1
ILF3-218ENST00000590009 ZCCHC6Q5VYS8 1495 aaKnown RBP27.28■■□□□ 1.96
ILF3-218ENST00000590009 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
ILF3-218ENST00000590009 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
ILF3-218ENST00000590009 NACADO15069 1562 aa26.96■■□□□ 1.91
ILF3-218ENST00000590009 MYO15BQ96JP2 1530 aa26.94■■□□□ 1.9
ILF3-218ENST00000590009 RB1CC1Q8TDY2 1594 aa26.89■■□□□ 1.9
ILF3-218ENST00000590009 DCAF8L2P0C7V8 631 aa26.88■■□□□ 1.89
ILF3-218ENST00000590009 SCRIBQ14160 1630 aa26.34■■□□□ 1.81
ILF3-218ENST00000590009 UNC13AQ9UPW8 1703 aa26.33■■□□□ 1.81
ILF3-218ENST00000590009 PABPN1Q86U42 306 aaKnown RBP eCLIP26.12■■□□□ 1.77
ILF3-218ENST00000590009 BICRAQ9NZM4 1560 aa26.05■■□□□ 1.76
ILF3-218ENST00000590009 SHROOM4Q9ULL8 1493 aa25.97■■□□□ 1.75
ILF3-218ENST00000590009 CECR2Q9BXF3 1484 aa25.42■■□□□ 1.66
ILF3-218ENST00000590009 CC2D2AQ9P2K1 1620 aa25.37■■□□□ 1.65
ILF3-218ENST00000590009 EIF4G1Q04637 1599 aaKnown RBP25.33■■□□□ 1.65
ILF3-218ENST00000590009 BAZ1AQ9NRL2 1556 aaPredicted RBP25.25■■□□□ 1.63
ILF3-218ENST00000590009 SMARCA4P51532 1647 aa25.23■■□□□ 1.63
ILF3-218ENST00000590009 DNAJC5Q9H3Z4 198 aa25.17■■□□□ 1.62
ILF3-218ENST00000590009 MROH2BQ7Z745 1585 aa25.11■■□□□ 1.61
ILF3-218ENST00000590009 AEBP2Q6ZN18 517 aaPredicted RBP24.97■■□□□ 1.59
ILF3-218ENST00000590009 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
ILF3-218ENST00000590009 RSF1Q96T23 1441 aaPredicted RBP24.95■■□□□ 1.59
ILF3-218ENST00000590009 SMARCA2P51531 1590 aa24.95■■□□□ 1.58
ILF3-218ENST00000590009 ATAD2BQ9ULI0 1458 aa24.92■■□□□ 1.58
ILF3-218ENST00000590009 WIZO95785 1651 aa24.88■■□□□ 1.57
ILF3-218ENST00000590009 HMGXB3Q12766 1538 aa24.82■■□□□ 1.56
ILF3-218ENST00000590009 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
ILF3-218ENST00000590009 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
ILF3-218ENST00000590009 TOP2AP11388 1531 aaKnown RBP24.68■■□□□ 1.54
ILF3-218ENST00000590009 SUPT5HO00267 1087 aaKnown RBP24.59■■□□□ 1.53
ILF3-218ENST00000590009 CUX2O14529 1486 aa24.5■■□□□ 1.51
ILF3-218ENST00000590009 CCDC88BA6NC98 1476 aa24.31■■□□□ 1.48
ILF3-218ENST00000590009 ERCC6Q03468 1493 aa24.3■■□□□ 1.48
ILF3-218ENST00000590009 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
ILF3-218ENST00000590009 NESP48681 1621 aa24.1■■□□□ 1.45
ILF3-218ENST00000590009 CADPSQ9ULU8 1353 aa24.1■■□□□ 1.45
ILF3-218ENST00000590009 CFTRP13569 1480 aa24.09■■□□□ 1.45
ILF3-218ENST00000590009 PRDM2Q13029 1718 aa24.07■■□□□ 1.44
ILF3-218ENST00000590009 PDS5BQ9NTI5 1447 aa23.92■■□□□ 1.42
ILF3-218ENST00000590009 KIF21AQ7Z4S6 1674 aa23.91■■□□□ 1.42
ILF3-218ENST00000590009 THOC2Q8NI27 1593 aaKnown RBP23.88■■□□□ 1.41
ILF3-218ENST00000590009 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
ILF3-218ENST00000590009 CEP164Q9UPV0 1460 aa23.83■■□□□ 1.41
ILF3-218ENST00000590009 TRIM41Q8WV44 630 aa23.76■■□□□ 1.39
ILF3-218ENST00000590009 MRC2Q9UBG0 1479 aa23.7■■□□□ 1.38
ILF3-218ENST00000590009 WDR62O43379 1518 aa23.63■■□□□ 1.37
ILF3-218ENST00000590009 URB2Q14146 1524 aaKnown RBP23.62■■□□□ 1.37
ILF3-218ENST00000590009 CHIC1Q5VXU3 224 aa23.61■■□□□ 1.37
ILF3-218ENST00000590009 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
ILF3-218ENST00000590009 DNMBPQ6XZF7 1577 aa23.6■■□□□ 1.37
ILF3-218ENST00000590009 CUX1P39880 1505 aa23.56■■□□□ 1.36
ILF3-218ENST00000590009 TOPBP1Q92547 1522 aa23.56■■□□□ 1.36
ILF3-218ENST00000590009 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
ILF3-218ENST00000590009 SYNJ1O43426 1573 aa23.51■■□□□ 1.35
ILF3-218ENST00000590009 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
ILF3-218ENST00000590009 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
ILF3-218ENST00000590009 FGD5Q6ZNL6 1462 aa23.4■■□□□ 1.34
ILF3-218ENST00000590009 POLA1P09884 1462 aaPredicted RBP23.38■■□□□ 1.33
ILF3-218ENST00000590009 IFT140Q96RY7 1462 aa23.29■■□□□ 1.32
ILF3-218ENST00000590009 OSCARQ8IYS5 282 aa23.28■■□□□ 1.32
ILF3-218ENST00000590009 TARBP1Q13395 1621 aaKnown RBP23.28■■□□□ 1.32
ILF3-218ENST00000590009 WDR97A6NE52 1622 aa23.27■■□□□ 1.32
ILF3-218ENST00000590009 RAD54L2Q9Y4B4 1467 aa23.24■■□□□ 1.31
ILF3-218ENST00000590009 SOGA1O94964 1423 aa23.24■■□□□ 1.31
ILF3-218ENST00000590009 ABCA10Q8WWZ4 1543 aa23.19■■□□□ 1.3
ILF3-218ENST00000590009 EIF4G3O43432 1585 aaKnown RBP23.14■■□□□ 1.3
ILF3-218ENST00000590009 ZNF608Q9ULD9 1512 aaPredicted RBP23.13■■□□□ 1.29
ILF3-218ENST00000590009 ABCA5Q8WWZ7 1642 aa23.11■■□□□ 1.29
ILF3-218ENST00000590009 PBRM1Q86U86 1689 aa23.03■■□□□ 1.28
ILF3-218ENST00000590009 TDRD9Q8NDG6 1382 aaKnown RBP23.03■■□□□ 1.28
ILF3-218ENST00000590009 AQRO60306 1485 aaKnown RBP eCLIP23.02■■□□□ 1.283e-10■■■■□ 19.5
ILF3-218ENST00000590009 GAPVD1Q14C86 1478 aa23.02■■□□□ 1.28
ILF3-218ENST00000590009 RIMBP3CA6NJZ7 1639 aa23.01■■□□□ 1.27
ILF3-218ENST00000590009 RIMBP3BA6NNM3 1639 aa23.01■■□□□ 1.27
ILF3-218ENST00000590009 RIMBP3Q9UFD9 1639 aa23.01■■□□□ 1.27
ILF3-218ENST00000590009 KIF27Q86VH2 1401 aa23■■□□□ 1.27
ILF3-218ENST00000590009 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
ILF3-218ENST00000590009 ERICH3Q5RHP9 1530 aa22.93■■□□□ 1.26
ILF3-218ENST00000590009 ARHGEF11O15085 1522 aa22.91■■□□□ 1.26
ILF3-218ENST00000590009 RUSC2Q8N2Y8 1516 aa22.91■■□□□ 1.26
ILF3-218ENST00000590009 SNAPC4Q5SXM2 1469 aa22.9■■□□□ 1.26
ILF3-218ENST00000590009 EEA1Q15075 1411 aa22.89■■□□□ 1.25
ILF3-218ENST00000590009 ADAMTS12P58397 1594 aa22.88■■□□□ 1.25
ILF3-218ENST00000590009 MAGI1Q96QZ7 1491 aaPredicted RBP22.87■■□□□ 1.25
ILF3-218ENST00000590009 CUL7Q14999 1698 aa22.86■■□□□ 1.25
ILF3-218ENST00000590009 IGF1RP08069 1367 aa22.79■■□□□ 1.24
ILF3-218ENST00000590009 CYB5RLQ6IPT4 315 aa22.77■■□□□ 1.24
ILF3-218ENST00000590009 SYNJ2O15056 1496 aa22.77■■□□□ 1.24
ILF3-218ENST00000590009 CHD1O14646 1710 aa22.77■■□□□ 1.23
ILF3-218ENST00000590009 FHAD1B1AJZ9 1412 aa22.76■■□□□ 1.23
ILF3-218ENST00000590009 FAM9AQ8IZU1 332 aaPredicted RBP22.71■■□□□ 1.23
ILF3-218ENST00000590009 CARMIL1Q5VZK9 1371 aa22.69■■□□□ 1.22
ILF3-218ENST00000590009 GRIN2AQ12879 1464 aa22.68■■□□□ 1.22
ILF3-218ENST00000590009 PRXQ9BXM0 1461 aa22.68■■□□□ 1.22
ILF3-218ENST00000590009 CSRNP3Q8WYN3 585 aa22.68■■□□□ 1.22
ILF3-218ENST00000590009 TRHP20396 242 aaPredicted RBP22.67■■□□□ 1.22
ILF3-218ENST00000590009 KIF21BO75037 1637 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms