RNA–Protein interactions for RNA: ENST00000588657.5

ILF3-210, Transcript of interleukin enhancer binding factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ILF3, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-210ENST00000588657 NISCHQ9Y2I1 1504 aa32.98■■■□□ 2.87
ILF3-210ENST00000588657 CCDC180Q9P1Z9 1646 aa28.24■■■□□ 2.11
ILF3-210ENST00000588657 ZCCHC6Q5VYS8 1495 aaKnown RBP27.94■■■□□ 2.06
ILF3-210ENST00000588657 SHROOM4Q9ULL8 1493 aa27.67■■■□□ 2.02
ILF3-210ENST00000588657 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
ILF3-210ENST00000588657 SUPT5HO00267 1087 aaKnown RBP27.17■■□□□ 1.94
ILF3-210ENST00000588657 DCAF8L2P0C7V8 631 aa26.83■■□□□ 1.89
ILF3-210ENST00000588657 CHIC1Q5VXU3 224 aa26.63■■□□□ 1.85
ILF3-210ENST00000588657 MYO15BQ96JP2 1530 aa26.55■■□□□ 1.84
ILF3-210ENST00000588657 ABCC9O60706 1549 aa26.38■■□□□ 1.81
ILF3-210ENST00000588657 SCRIBQ14160 1630 aa26.12■■□□□ 1.77
ILF3-210ENST00000588657 NACADO15069 1562 aa26.04■■□□□ 1.76
ILF3-210ENST00000588657 RSF1Q96T23 1441 aaPredicted RBP26.02■■□□□ 1.76
ILF3-210ENST00000588657 HRCP23327 699 aa25.88■■□□□ 1.73
ILF3-210ENST00000588657 RB1CC1Q8TDY2 1594 aa25.86■■□□□ 1.73
ILF3-210ENST00000588657 PCGF6Q9BYE7 350 aa25.65■■□□□ 1.7
ILF3-210ENST00000588657 LOC105371045A0A1W2PR82 267 aa25.63■■□□□ 1.69
ILF3-210ENST00000588657 CECR2Q9BXF3 1484 aa25.53■■□□□ 1.68
ILF3-210ENST00000588657 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
ILF3-210ENST00000588657 TRIM41Q8WV44 630 aa25.48■■□□□ 1.67
ILF3-210ENST00000588657 TRIM26Q12899 539 aaPredicted RBP25.4■■□□□ 1.66
ILF3-210ENST00000588657 BAZ1AQ9NRL2 1556 aaPredicted RBP25.4■■□□□ 1.66
ILF3-210ENST00000588657 WIZO95785 1651 aa25.38■■□□□ 1.65
ILF3-210ENST00000588657 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
ILF3-210ENST00000588657 TOP2AP11388 1531 aaKnown RBP25.15■■□□□ 1.62
ILF3-210ENST00000588657 SMARCA4P51532 1647 aa25.12■■□□□ 1.61
ILF3-210ENST00000588657 UNC13AQ9UPW8 1703 aa25.08■■□□□ 1.6
ILF3-210ENST00000588657 FAM9AQ8IZU1 332 aaPredicted RBP25.03■■□□□ 1.6
ILF3-210ENST00000588657 PPARGC1BQ86YN6 1023 aaKnown RBP25.02■■□□□ 1.6
ILF3-210ENST00000588657 ZEB1P37275 1124 aaPredicted RBP25.01■■□□□ 1.59
ILF3-210ENST00000588657 PELP1Q8IZL8 1130 aaKnown RBP24.97■■□□□ 1.59
ILF3-210ENST00000588657 SMARCA2P51531 1590 aa24.95■■□□□ 1.58
ILF3-210ENST00000588657 CCDC88BA6NC98 1476 aa24.91■■□□□ 1.58
ILF3-210ENST00000588657 PEG3Q9GZU2 1588 aa24.78■■□□□ 1.56
ILF3-210ENST00000588657 BICRAQ9NZM4 1560 aa24.77■■□□□ 1.56
ILF3-210ENST00000588657 ABCC8Q09428 1581 aa24.73■■□□□ 1.55
ILF3-210ENST00000588657 EEA1Q15075 1411 aa24.73■■□□□ 1.55
ILF3-210ENST00000588657 WRNQ14191 1432 aaPredicted RBP eCLIP24.65■■□□□ 1.54
ILF3-210ENST00000588657 EHMT2Q96KQ7 1210 aa24.61■■□□□ 1.53
ILF3-210ENST00000588657 TNIKQ9UKE5 1360 aa24.56■■□□□ 1.52
ILF3-210ENST00000588657 SOGA1O94964 1423 aa24.5■■□□□ 1.51
ILF3-210ENST00000588657 CEP162Q5TB80 1403 aa24.5■■□□□ 1.51
ILF3-210ENST00000588657 CSRNP3Q8WYN3 585 aa24.45■■□□□ 1.5
ILF3-210ENST00000588657 PABPN1Q86U42 306 aaKnown RBP eCLIP24.45■■□□□ 1.51e-7■■□□□ 12.6
ILF3-210ENST00000588657 ATAD2BQ9ULI0 1458 aa24.43■■□□□ 1.5
ILF3-210ENST00000588657 GOLGA3Q08378 1498 aa24.42■■□□□ 1.5
ILF3-210ENST00000588657 BAZ1BQ9UIG0 1483 aaKnown RBP24.35■■□□□ 1.49
ILF3-210ENST00000588657 RUSC2Q8N2Y8 1516 aa24.34■■□□□ 1.49
ILF3-210ENST00000588657 KIF21BO75037 1637 aa24.34■■□□□ 1.49
ILF3-210ENST00000588657 SYNJ1O43426 1573 aa24.31■■□□□ 1.48
ILF3-210ENST00000588657 CEP164Q9UPV0 1460 aa24.3■■□□□ 1.48
ILF3-210ENST00000588657 MYT1Q01538 1121 aa24.28■■□□□ 1.48
ILF3-210ENST00000588657 UBTFP17480 764 aaKnown RBP24.22■■□□□ 1.47
ILF3-210ENST00000588657 CCER1Q8TC90 406 aaPredicted RBP24.19■■□□□ 1.46
ILF3-210ENST00000588657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.15■■□□□ 1.46
ILF3-210ENST00000588657 TOP2BQ02880 1626 aa24.13■■□□□ 1.45
ILF3-210ENST00000588657 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
ILF3-210ENST00000588657 BIVM-ERCC5R4GMW8 1640 aa24.1■■□□□ 1.45
ILF3-210ENST00000588657 CLIP1P30622 1438 aa24.06■■□□□ 1.44
ILF3-210ENST00000588657 NCAPD3P42695 1498 aa24.03■■□□□ 1.44
ILF3-210ENST00000588657 VPS8Q8N3P4 1428 aa24.02■■□□□ 1.44
ILF3-210ENST00000588657 ERICH3Q5RHP9 1530 aa23.97■■□□□ 1.43
ILF3-210ENST00000588657 RAPGEF2Q9Y4G8 1499 aa23.96■■□□□ 1.43
ILF3-210ENST00000588657 TTBK1Q5TCY1 1321 aaPredicted RBP23.88■■□□□ 1.41
ILF3-210ENST00000588657 PRXQ9BXM0 1461 aa23.87■■□□□ 1.41
ILF3-210ENST00000588657 CFTRP13569 1480 aa23.81■■□□□ 1.4
ILF3-210ENST00000588657 CUX1P39880 1505 aa23.8■■□□□ 1.4
ILF3-210ENST00000588657 APLP2Q06481 763 aa23.79■■□□□ 1.4
ILF3-210ENST00000588657 DIEXFQ68CQ4 756 aaKnown RBP23.76■■□□□ 1.39
ILF3-210ENST00000588657 PRDM2Q13029 1718 aa23.76■■□□□ 1.39
ILF3-210ENST00000588657 KIF27Q86VH2 1401 aa23.74■■□□□ 1.39
ILF3-210ENST00000588657 SCAF1Q9H7N4 1312 aaKnown RBP23.7■■□□□ 1.39
ILF3-210ENST00000588657 ARAP1Q96P48 1450 aa23.69■■□□□ 1.38
ILF3-210ENST00000588657 ZNF316A6NFI3 1004 aaPredicted RBP23.66■■□□□ 1.38
ILF3-210ENST00000588657 ACIN1Q9UKV3 1341 aaKnown RBP23.62■■□□□ 1.37
ILF3-210ENST00000588657 HNRNPUL2Q1KMD3 747 aaKnown RBP23.61■■□□□ 1.37
ILF3-210ENST00000588657 CLSPNQ9HAW4 1339 aa23.58■■□□□ 1.37
ILF3-210ENST00000588657 CENPBP07199 599 aaPredicted RBP23.56■■□□□ 1.36
ILF3-210ENST00000588657 RRBP1Q9P2E9 1410 aaKnown RBP23.5■■□□□ 1.35
ILF3-210ENST00000588657 CADPSQ9ULU8 1353 aa23.49■■□□□ 1.35
ILF3-210ENST00000588657 ARHGAP35Q9NRY4 1499 aa23.47■■□□□ 1.35
ILF3-210ENST00000588657 RANGAP1P46060 587 aaPredicted RBP23.46■■□□□ 1.35
ILF3-210ENST00000588657 NEUROD1Q13562 356 aa23.46■■□□□ 1.35
ILF3-210ENST00000588657 MAP3K1Q13233 1512 aa23.44■■□□□ 1.34
ILF3-210ENST00000588657 CUX2O14529 1486 aa23.43■■□□□ 1.34
ILF3-210ENST00000588657 IGF1RP08069 1367 aa23.41■■□□□ 1.34
ILF3-210ENST00000588657 DHX57Q6P158 1386 aaKnown RBP23.38■■□□□ 1.33
ILF3-210ENST00000588657 KANK4Q5T7N3 995 aaPredicted RBP23.37■■□□□ 1.33
ILF3-210ENST00000588657 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
ILF3-210ENST00000588657 CCNB3Q8WWL7 1395 aa23.32■■□□□ 1.32
ILF3-210ENST00000588657 CARMIL1Q5VZK9 1371 aa23.31■■□□□ 1.32
ILF3-210ENST00000588657 TIAM1Q13009 1591 aa23.29■■□□□ 1.32
ILF3-210ENST00000588657 CC2D2AQ9P2K1 1620 aa23.28■■□□□ 1.32
ILF3-210ENST00000588657 DNMBPQ6XZF7 1577 aa23.24■■□□□ 1.31
ILF3-210ENST00000588657 FANCD2Q9BXW9 1451 aa23.24■■□□□ 1.31
ILF3-210ENST00000588657 FHAD1B1AJZ9 1412 aa23.23■■□□□ 1.31
ILF3-210ENST00000588657 GTF3C3Q9Y5Q9 886 aa23.22■■□□□ 1.31
ILF3-210ENST00000588657 ABCA10Q8WWZ4 1543 aa23.19■■□□□ 1.3
ILF3-210ENST00000588657 CFAP43Q8NDM7 1665 aa23.18■■□□□ 1.3
ILF3-210ENST00000588657 MIER1Q8N108 512 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms