RNA–Protein interactions for RNA: ENST00000363442.1

RN7SKP255-201, Transcript of RNA, 7SK small nuclear pseudogene 255, humanhuman

BASIC

Gene RN7SKP255, Length 313 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP255-201ENST00000363442 NISCHQ9Y2I1 1504 aa31.47■■■□□ 2.63
RN7SKP255-201ENST00000363442 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
RN7SKP255-201ENST00000363442 ABCC9O60706 1549 aa26.83■■□□□ 1.89
RN7SKP255-201ENST00000363442 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
RN7SKP255-201ENST00000363442 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
RN7SKP255-201ENST00000363442 DCAF1Q9Y4B6 1507 aa26.04■■□□□ 1.76
RN7SKP255-201ENST00000363442 NACADO15069 1562 aa26.03■■□□□ 1.76
RN7SKP255-201ENST00000363442 MYO15BQ96JP2 1530 aa25.99■■□□□ 1.75
RN7SKP255-201ENST00000363442 RB1CC1Q8TDY2 1594 aa25.95■■□□□ 1.75
RN7SKP255-201ENST00000363442 SCRIBQ14160 1630 aa25.4■■□□□ 1.66
RN7SKP255-201ENST00000363442 UNC13AQ9UPW8 1703 aa25.28■■□□□ 1.64
RN7SKP255-201ENST00000363442 SHROOM4Q9ULL8 1493 aa25.19■■□□□ 1.62
RN7SKP255-201ENST00000363442 PABPN1Q86U42 306 aaKnown RBP eCLIP25.18■■□□□ 1.62
RN7SKP255-201ENST00000363442 BICRAQ9NZM4 1560 aa25.12■■□□□ 1.61
RN7SKP255-201ENST00000363442 CECR2Q9BXF3 1484 aa24.48■■□□□ 1.51
RN7SKP255-201ENST00000363442 EIF4G1Q04637 1599 aaKnown RBP24.45■■□□□ 1.5
RN7SKP255-201ENST00000363442 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
RN7SKP255-201ENST00000363442 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
RN7SKP255-201ENST00000363442 MROH2BQ7Z745 1585 aa24.26■■□□□ 1.47
RN7SKP255-201ENST00000363442 DNAJC5BQ9UF47 199 aa24.25■■□□□ 1.47
RN7SKP255-201ENST00000363442 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
RN7SKP255-201ENST00000363442 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
RN7SKP255-201ENST00000363442 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
RN7SKP255-201ENST00000363442 SMARCA2P51531 1590 aa24.09■■□□□ 1.45
RN7SKP255-201ENST00000363442 PEG3Q9GZU2 1588 aa24.05■■□□□ 1.44
RN7SKP255-201ENST00000363442 NCAPD3P42695 1498 aa24.02■■□□□ 1.44
RN7SKP255-201ENST00000363442 WIZO95785 1651 aa24■■□□□ 1.43
RN7SKP255-201ENST00000363442 BAZ1BQ9UIG0 1483 aaKnown RBP23.94■■□□□ 1.42
RN7SKP255-201ENST00000363442 SUPT5HO00267 1087 aaKnown RBP23.94■■□□□ 1.42
RN7SKP255-201ENST00000363442 HMGXB3Q12766 1538 aa23.92■■□□□ 1.42
RN7SKP255-201ENST00000363442 TOP2AP11388 1531 aaKnown RBP23.79■■□□□ 1.4
RN7SKP255-201ENST00000363442 CCDC88BA6NC98 1476 aa23.53■■□□□ 1.36
RN7SKP255-201ENST00000363442 CADPSQ9ULU8 1353 aa23.38■■□□□ 1.33
RN7SKP255-201ENST00000363442 NESP48681 1621 aa23.32■■□□□ 1.32
RN7SKP255-201ENST00000363442 LAMC3Q9Y6N6 1575 aa23.3■■□□□ 1.32
RN7SKP255-201ENST00000363442 CFTRP13569 1480 aa23.3■■□□□ 1.32
RN7SKP255-201ENST00000363442 PDS5BQ9NTI5 1447 aa23.19■■□□□ 1.3
RN7SKP255-201ENST00000363442 ERCC6Q03468 1493 aa23.11■■□□□ 1.29
RN7SKP255-201ENST00000363442 FANCD2Q9BXW9 1451 aa23.1■■□□□ 1.29
RN7SKP255-201ENST00000363442 PRDM2Q13029 1718 aa23.06■■□□□ 1.28
RN7SKP255-201ENST00000363442 CEP164Q9UPV0 1460 aa23.03■■□□□ 1.28
RN7SKP255-201ENST00000363442 KIF21AQ7Z4S6 1674 aa23■■□□□ 1.27
RN7SKP255-201ENST00000363442 MRC2Q9UBG0 1479 aa22.91■■□□□ 1.26
RN7SKP255-201ENST00000363442 THOC2Q8NI27 1593 aaKnown RBP22.83■■□□□ 1.25
RN7SKP255-201ENST00000363442 URB2Q14146 1524 aaKnown RBP22.82■■□□□ 1.24
RN7SKP255-201ENST00000363442 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
RN7SKP255-201ENST00000363442 WDR62O43379 1518 aa22.78■■□□□ 1.24
RN7SKP255-201ENST00000363442 WRNQ14191 1432 aaPredicted RBP eCLIP22.78■■□□□ 1.241e-10■□□□□ 9.9
RN7SKP255-201ENST00000363442 TOPBP1Q92547 1522 aa22.76■■□□□ 1.23
RN7SKP255-201ENST00000363442 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
RN7SKP255-201ENST00000363442 CUX1P39880 1505 aa22.73■■□□□ 1.23
RN7SKP255-201ENST00000363442 CUX2O14529 1486 aa22.68■■□□□ 1.22
RN7SKP255-201ENST00000363442 SYNJ1O43426 1573 aa22.65■■□□□ 1.22
RN7SKP255-201ENST00000363442 TOP2BQ02880 1626 aa22.64■■□□□ 1.21
RN7SKP255-201ENST00000363442 FGD5Q6ZNL6 1462 aa22.61■■□□□ 1.21
RN7SKP255-201ENST00000363442 BIVM-ERCC5R4GMW8 1640 aa22.6■■□□□ 1.21
RN7SKP255-201ENST00000363442 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
RN7SKP255-201ENST00000363442 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
RN7SKP255-201ENST00000363442 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
RN7SKP255-201ENST00000363442 SOGA1O94964 1423 aa22.55■■□□□ 1.2
RN7SKP255-201ENST00000363442 IFT140Q96RY7 1462 aa22.53■■□□□ 1.2
RN7SKP255-201ENST00000363442 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
RN7SKP255-201ENST00000363442 TARBP1Q13395 1621 aaKnown RBP22.44■■□□□ 1.18
RN7SKP255-201ENST00000363442 ABCA10Q8WWZ4 1543 aa22.4■■□□□ 1.18
RN7SKP255-201ENST00000363442 TDRD9Q8NDG6 1382 aaKnown RBP22.38■■□□□ 1.17
RN7SKP255-201ENST00000363442 ZNF608Q9ULD9 1512 aaPredicted RBP22.37■■□□□ 1.17
RN7SKP255-201ENST00000363442 AQRO60306 1485 aaKnown RBP eCLIP22.33■■□□□ 1.16
RN7SKP255-201ENST00000363442 WDR97A6NE52 1622 aa22.32■■□□□ 1.16
RN7SKP255-201ENST00000363442 KIF27Q86VH2 1401 aa22.29■■□□□ 1.16
RN7SKP255-201ENST00000363442 GAPVD1Q14C86 1478 aa22.28■■□□□ 1.16
RN7SKP255-201ENST00000363442 EIF4G3O43432 1585 aaKnown RBP22.28■■□□□ 1.16
RN7SKP255-201ENST00000363442 ABCA5Q8WWZ7 1642 aa22.24■■□□□ 1.15
RN7SKP255-201ENST00000363442 GRIN2BQ13224 1484 aa22.22■■□□□ 1.15
RN7SKP255-201ENST00000363442 RUSC2Q8N2Y8 1516 aa22.18■■□□□ 1.14
RN7SKP255-201ENST00000363442 ERICH3Q5RHP9 1530 aa22.14■■□□□ 1.13
RN7SKP255-201ENST00000363442 EEA1Q15075 1411 aa22.14■■□□□ 1.13
RN7SKP255-201ENST00000363442 IGF1RP08069 1367 aa22.13■■□□□ 1.13
RN7SKP255-201ENST00000363442 FAM9AQ8IZU1 332 aaPredicted RBP22.13■■□□□ 1.13
RN7SKP255-201ENST00000363442 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
RN7SKP255-201ENST00000363442 SNAPC4Q5SXM2 1469 aa22.12■■□□□ 1.13
RN7SKP255-201ENST00000363442 MAGI1Q96QZ7 1491 aaPredicted RBP22.1■■□□□ 1.13
RN7SKP255-201ENST00000363442 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
RN7SKP255-201ENST00000363442 FBLN2P98095 1184 aa22.04■■□□□ 1.12
RN7SKP255-201ENST00000363442 CHMP7Q8WUX9 453 aaPredicted RBP22.04■■□□□ 1.12
RN7SKP255-201ENST00000363442 FHAD1B1AJZ9 1412 aa22.04■■□□□ 1.12
RN7SKP255-201ENST00000363442 CARMIL1Q5VZK9 1371 aa22.03■■□□□ 1.12
RN7SKP255-201ENST00000363442 SYNJ2O15056 1496 aa22.02■■□□□ 1.12
RN7SKP255-201ENST00000363442 ADAMTS12P58397 1594 aa22.01■■□□□ 1.11
RN7SKP255-201ENST00000363442 CUL7Q14999 1698 aa22■■□□□ 1.11
RN7SKP255-201ENST00000363442 PRXQ9BXM0 1461 aa21.93■■□□□ 1.1
RN7SKP255-201ENST00000363442 GRIN2AQ12879 1464 aa21.92■■□□□ 1.1
RN7SKP255-201ENST00000363442 RAPGEF2Q9Y4G8 1499 aa21.92■■□□□ 1.1
RN7SKP255-201ENST00000363442 CHD1O14646 1710 aa21.89■■□□□ 1.1
RN7SKP255-201ENST00000363442 OSCARQ8IYS5 282 aa21.88■■□□□ 1.09
RN7SKP255-201ENST00000363442 KIF21BO75037 1637 aa21.82■■□□□ 1.08
RN7SKP255-201ENST00000363442 EHMT2Q96KQ7 1210 aa21.82■■□□□ 1.08
RN7SKP255-201ENST00000363442 NUP160Q12769 1436 aa21.8■■□□□ 1.08
RN7SKP255-201ENST00000363442 GOLGA3Q08378 1498 aa21.77■■□□□ 1.08
RN7SKP255-201ENST00000363442 CEP170Q5SW79 1584 aa21.77■■□□□ 1.08
RN7SKP255-201ENST00000363442 UBTFP17480 764 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms