RNA–Protein interactions for RNA: ENST00000592763.5

ILF3-222, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 5 BASIC

Gene ILF3, Length 3,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-222ENST00000592763 NISCHQ9Y2I1 1504 aa22.45■■□□□ 1.18
ILF3-222ENST00000592763 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.83
ILF3-222ENST00000592763 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.75
ILF3-222ENST00000592763 SUPT5HO00267 1087 aaKnown RBP19.27■□□□□ 0.68
ILF3-222ENST00000592763 ABCC9O60706 1549 aa18.93■□□□□ 0.62
ILF3-222ENST00000592763 CCDC180Q9P1Z9 1646 aa18.91■□□□□ 0.62
ILF3-222ENST00000592763 ZCCHC6Q5VYS8 1495 aaKnown RBP18.75■□□□□ 0.59
ILF3-222ENST00000592763 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.521e-7■■□□□ 13.1
ILF3-222ENST00000592763 SCRIBQ14160 1630 aa18.24■□□□□ 0.51
ILF3-222ENST00000592763 EHMT2Q96KQ7 1210 aa18.12■□□□□ 0.49
ILF3-222ENST00000592763 DCAF1Q9Y4B6 1507 aa18.07■□□□□ 0.48
ILF3-222ENST00000592763 FAM9AQ8IZU1 332 aaPredicted RBP17.98■□□□□ 0.47
ILF3-222ENST00000592763 NACADO15069 1562 aa17.94■□□□□ 0.46
ILF3-222ENST00000592763 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
ILF3-222ENST00000592763 RB1CC1Q8TDY2 1594 aa17.9■□□□□ 0.46
ILF3-222ENST00000592763 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
ILF3-222ENST00000592763 CECR2Q9BXF3 1484 aa17.74■□□□□ 0.43
ILF3-222ENST00000592763 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
ILF3-222ENST00000592763 MYO15BQ96JP2 1530 aa17.69■□□□□ 0.42
ILF3-222ENST00000592763 LOC105371045A0A1W2PR82 267 aa17.66■□□□□ 0.42
ILF3-222ENST00000592763 MROH2BQ7Z745 1585 aa17.5■□□□□ 0.39
ILF3-222ENST00000592763 RANGAP1P46060 587 aaPredicted RBP17.41■□□□□ 0.38
ILF3-222ENST00000592763 BAZ1AQ9NRL2 1556 aaPredicted RBP17.34■□□□□ 0.37
ILF3-222ENST00000592763 TTBK1Q5TCY1 1321 aaPredicted RBP17.33■□□□□ 0.37
ILF3-222ENST00000592763 PCGF6Q9BYE7 350 aa17.29■□□□□ 0.36
ILF3-222ENST00000592763 WIZO95785 1651 aa17.29■□□□□ 0.36
ILF3-222ENST00000592763 UBTFP17480 764 aaKnown RBP17.29■□□□□ 0.36
ILF3-222ENST00000592763 PPARGC1BQ86YN6 1023 aaKnown RBP17.26■□□□□ 0.35
ILF3-222ENST00000592763 BAZ1BQ9UIG0 1483 aaKnown RBP17.14■□□□□ 0.33
ILF3-222ENST00000592763 SMARCA4P51532 1647 aa17.11■□□□□ 0.33
ILF3-222ENST00000592763 CCDC88BA6NC98 1476 aa17.1■□□□□ 0.33
ILF3-222ENST00000592763 BICRAQ9NZM4 1560 aa17.08■□□□□ 0.32
ILF3-222ENST00000592763 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.31
ILF3-222ENST00000592763 UNC13AQ9UPW8 1703 aa17■□□□□ 0.31
ILF3-222ENST00000592763 TOP2AP11388 1531 aaKnown RBP16.98■□□□□ 0.31
ILF3-222ENST00000592763 CSRNP3Q8WYN3 585 aa16.96■□□□□ 0.31
ILF3-222ENST00000592763 APLP2Q06481 763 aa16.95■□□□□ 0.3
ILF3-222ENST00000592763 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
ILF3-222ENST00000592763 SMARCA2P51531 1590 aa16.9■□□□□ 0.3
ILF3-222ENST00000592763 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.29
ILF3-222ENST00000592763 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
ILF3-222ENST00000592763 EIF4G1Q04637 1599 aaKnown RBP16.83■□□□□ 0.29
ILF3-222ENST00000592763 SOGA1O94964 1423 aa16.81■□□□□ 0.28
ILF3-222ENST00000592763 TRIM26Q12899 539 aaPredicted RBP16.8■□□□□ 0.28
ILF3-222ENST00000592763 DNAJC5BQ9UF47 199 aa16.73■□□□□ 0.27
ILF3-222ENST00000592763 NCAPD3P42695 1498 aa16.7■□□□□ 0.26
ILF3-222ENST00000592763 P3H3Q8IVL6 736 aa16.65■□□□□ 0.26
ILF3-222ENST00000592763 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
ILF3-222ENST00000592763 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
ILF3-222ENST00000592763 CC2D2AQ9P2K1 1620 aa16.58■□□□□ 0.25
ILF3-222ENST00000592763 FBLN2P98095 1184 aa16.57■□□□□ 0.24
ILF3-222ENST00000592763 CCER1Q8TC90 406 aaPredicted RBP16.57■□□□□ 0.24
ILF3-222ENST00000592763 HNRNPUL2Q1KMD3 747 aaKnown RBP16.56■□□□□ 0.24
ILF3-222ENST00000592763 ITGAEP38570 1179 aa16.54■□□□□ 0.24
ILF3-222ENST00000592763 CEP162Q5TB80 1403 aa16.51■□□□□ 0.23
ILF3-222ENST00000592763 PEG3Q9GZU2 1588 aa16.5■□□□□ 0.23
ILF3-222ENST00000592763 EEA1Q15075 1411 aa16.5■□□□□ 0.23
ILF3-222ENST00000592763 HRCP23327 699 aa16.5■□□□□ 0.23
ILF3-222ENST00000592763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.48■□□□□ 0.23
ILF3-222ENST00000592763 NESP48681 1621 aa16.48■□□□□ 0.23
ILF3-222ENST00000592763 KIF27Q86VH2 1401 aa16.47■□□□□ 0.23
ILF3-222ENST00000592763 GOLGA3Q08378 1498 aa16.46■□□□□ 0.23
ILF3-222ENST00000592763 CUX2O14529 1486 aa16.46■□□□□ 0.22
ILF3-222ENST00000592763 HMGXB3Q12766 1538 aa16.46■□□□□ 0.22
ILF3-222ENST00000592763 ARID3CA6NKF2 412 aa16.44■□□□□ 0.22
ILF3-222ENST00000592763 TNIKQ9UKE5 1360 aa16.44■□□□□ 0.22
ILF3-222ENST00000592763 CLIP1P30622 1438 aa16.43■□□□□ 0.22
ILF3-222ENST00000592763 CFTRP13569 1480 aa16.43■□□□□ 0.22
ILF3-222ENST00000592763 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
ILF3-222ENST00000592763 SYNJ1O43426 1573 aa16.42■□□□□ 0.22
ILF3-222ENST00000592763 CEP164Q9UPV0 1460 aa16.41■□□□□ 0.22
ILF3-222ENST00000592763 TDRD9Q8NDG6 1382 aaKnown RBP16.4■□□□□ 0.22
ILF3-222ENST00000592763 PDS5BQ9NTI5 1447 aa16.36■□□□□ 0.21
ILF3-222ENST00000592763 RAPGEF2Q9Y4G8 1499 aa16.36■□□□□ 0.21
ILF3-222ENST00000592763 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
ILF3-222ENST00000592763 CARMIL1Q5VZK9 1371 aa16.33■□□□□ 0.2
ILF3-222ENST00000592763 RAD54L2Q9Y4B4 1467 aa16.3■□□□□ 0.2
ILF3-222ENST00000592763 FGD5Q6ZNL6 1462 aa16.28■□□□□ 0.2
ILF3-222ENST00000592763 CUX1P39880 1505 aa16.28■□□□□ 0.2
ILF3-222ENST00000592763 FAM50AQ14320 339 aaKnown RBP16.27■□□□□ 0.2
ILF3-222ENST00000592763 ZEB1P37275 1124 aaPredicted RBP16.26■□□□□ 0.19
ILF3-222ENST00000592763 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
ILF3-222ENST00000592763 IGF1RP08069 1367 aa16.22■□□□□ 0.19
ILF3-222ENST00000592763 TOP2BQ02880 1626 aa16.19■□□□□ 0.18
ILF3-222ENST00000592763 KANK4Q5T7N3 995 aaPredicted RBP16.14■□□□□ 0.17
ILF3-222ENST00000592763 TOPBP1Q92547 1522 aa16.11■□□□□ 0.17
ILF3-222ENST00000592763 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
ILF3-222ENST00000592763 VPS8Q8N3P4 1428 aa16.09■□□□□ 0.17
ILF3-222ENST00000592763 AQRO60306 1485 aaKnown RBP eCLIP16.08■□□□□ 0.174e-9■■■■□ 23.4
ILF3-222ENST00000592763 PRXQ9BXM0 1461 aa16.03■□□□□ 0.16
ILF3-222ENST00000592763 GAPVD1Q14C86 1478 aa16.02■□□□□ 0.16
ILF3-222ENST00000592763 URB2Q14146 1524 aaKnown RBP16.01■□□□□ 0.15
ILF3-222ENST00000592763 FHOD3Q2V2M9 1422 aa16.01■□□□□ 0.15
ILF3-222ENST00000592763 LAMC3Q9Y6N6 1575 aa15.99■□□□□ 0.15
ILF3-222ENST00000592763 MTUS2Q5JR59 1369 aa15.98■□□□□ 0.15
ILF3-222ENST00000592763 ZNF777Q9ULD5 760 aaPredicted RBP15.97■□□□□ 0.15
ILF3-222ENST00000592763 DNMBPQ6XZF7 1577 aa15.97■□□□□ 0.15
ILF3-222ENST00000592763 KIF21BO75037 1637 aa15.96■□□□□ 0.15
ILF3-222ENST00000592763 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
ILF3-222ENST00000592763 CHIC2Q9UKJ5 165 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms