RNA–Protein interactions for RNA: ENST00000556692.1

RDH11-208, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 801 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-208ENST00000556692 AEBP2Q6ZN18 517 aaPredicted RBP25.24■■□□□ 1.63
RDH11-208ENST00000556692 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
RDH11-208ENST00000556692 SENP3Q9H4L4 574 aaPredicted RBP21.67■■□□□ 1.06
RDH11-208ENST00000556692 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
RDH11-208ENST00000556692 FOXD1Q16676 465 aa20.25■□□□□ 0.83
RDH11-208ENST00000556692 POTEDQ86YR6 584 aa19.76■□□□□ 0.75
RDH11-208ENST00000556692 MSH5O43196 834 aa19.21■□□□□ 0.67
RDH11-208ENST00000556692 PIAS4Q8N2W9 510 aaPredicted RBP18.83■□□□□ 0.6
RDH11-208ENST00000556692 PLPPR3Q6T4P5 718 aa18.46■□□□□ 0.55
RDH11-208ENST00000556692 PPP6R1Q9UPN7 881 aa18.46■□□□□ 0.55
RDH11-208ENST00000556692 ADRA2BP18089 450 aa18.41■□□□□ 0.54
RDH11-208ENST00000556692 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
RDH11-208ENST00000556692 DMRT2Q9Y5R5 561 aa17.06■□□□□ 0.32
RDH11-208ENST00000556692 CACNB1Q02641 598 aaPredicted RBP16.92■□□□□ 0.3
RDH11-208ENST00000556692 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
RDH11-208ENST00000556692 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
RDH11-208ENST00000556692 RNF39Q9H2S5 420 aa16.3■□□□□ 0.2
RDH11-208ENST00000556692 HOXD11P31277 338 aaPredicted RBP16.19■□□□□ 0.18
RDH11-208ENST00000556692 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
RDH11-208ENST00000556692 C1QBPQ07021 282 aaKnown RBP16.05■□□□□ 0.16
RDH11-208ENST00000556692 CNKSR2Q8WXI2 1034 aa15.94■□□□□ 0.14
RDH11-208ENST00000556692 RNF216Q9NWF9 866 aaPredicted RBP15.93■□□□□ 0.14
RDH11-208ENST00000556692 DNAJC5BQ9UF47 199 aa15.71■□□□□ 0.11
RDH11-208ENST00000556692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.53■□□□□ 0.08
RDH11-208ENST00000556692 POTEHQ6S545 545 aa15.38■□□□□ 0.05
RDH11-208ENST00000556692 NCBP3Q53F19 620 aaKnown RBP15.34■□□□□ 0.05
RDH11-208ENST00000556692 CAPN15O75808 1086 aa15.11■□□□□ 0.01
RDH11-208ENST00000556692 DSG3P32926 999 aa15.08■□□□□ 0
RDH11-208ENST00000556692 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
RDH11-208ENST00000556692 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
RDH11-208ENST00000556692 SPINK5Q9NQ38 1064 aaPredicted RBP15.04■□□□□ -0
RDH11-208ENST00000556692 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
RDH11-208ENST00000556692 ABCB7O75027 752 aa14.69□□□□□ -0.06
RDH11-208ENST00000556692 APLP2Q06481 763 aa14.64□□□□□ -0.07
RDH11-208ENST00000556692 ZNF219Q9P2Y4 722 aaPredicted RBP14.63□□□□□ -0.07
RDH11-208ENST00000556692 SLC4A2P04920 1241 aa14.52□□□□□ -0.09
RDH11-208ENST00000556692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.47□□□□□ -0.09
RDH11-208ENST00000556692 HNRNPUL2Q1KMD3 747 aaKnown RBP14.47□□□□□ -0.09
RDH11-208ENST00000556692 RBM42Q9BTD8 480 aaKnown RBP14.45□□□□□ -0.1
RDH11-208ENST00000556692 CHRDL2Q6WN34 429 aa14.36□□□□□ -0.11
RDH11-208ENST00000556692 SAMD1Q6SPF0 538 aaPredicted RBP14.35□□□□□ -0.11
RDH11-208ENST00000556692 KCNA4P22459 653 aa14.25□□□□□ -0.13
RDH11-208ENST00000556692 POLA2Q14181 598 aa14.16□□□□□ -0.14
RDH11-208ENST00000556692 SP7Q8TDD2 431 aaPredicted RBP14.14□□□□□ -0.15
RDH11-208ENST00000556692 MYCNP04198 464 aaPredicted RBP13.96□□□□□ -0.17
RDH11-208ENST00000556692 AKT1S1Q96B36 256 aa13.96□□□□□ -0.17
RDH11-208ENST00000556692 PIP4P2Q8N4L2 257 aa13.87□□□□□ -0.19
RDH11-208ENST00000556692 HAX1O00165 279 aa13.86□□□□□ -0.19
RDH11-208ENST00000556692 REM2Q8IYK8 340 aaPredicted RBP13.84□□□□□ -0.19
RDH11-208ENST00000556692 ZBTB12Q9Y330 459 aaPredicted RBP13.81□□□□□ -0.2
RDH11-208ENST00000556692 OSCARQ8IYS5 282 aa13.71□□□□□ -0.21
RDH11-208ENST00000556692 PITPNM1O00562 1244 aa13.69□□□□□ -0.22
RDH11-208ENST00000556692 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
RDH11-208ENST00000556692 ATF5Q9Y2D1 282 aaPredicted RBP13.66□□□□□ -0.22
RDH11-208ENST00000556692 EVX2Q03828 476 aa13.55□□□□□ -0.24
RDH11-208ENST00000556692 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
RDH11-208ENST00000556692 PRKAR2AP13861 404 aaKnown RBP13.37□□□□□ -0.27
RDH11-208ENST00000556692 SLC4A1APQ9BWU0 796 aaKnown RBP13.37□□□□□ -0.27
RDH11-208ENST00000556692 CLEC11AQ9Y240 323 aa13.33□□□□□ -0.28
RDH11-208ENST00000556692 SPDYE2BA6NHP3 402 aa13.32□□□□□ -0.28
RDH11-208ENST00000556692 SPDYE6P0CI01 402 aa13.32□□□□□ -0.28
RDH11-208ENST00000556692 SPDYE2Q495Y8 402 aa13.32□□□□□ -0.28
RDH11-208ENST00000556692 LHX8Q68G74 356 aa13.28□□□□□ -0.28
RDH11-208ENST00000556692 C19orf67A6NJJ6 358 aa13.26□□□□□ -0.29
RDH11-208ENST00000556692 SPDYE1Q8NFV5 336 aaPredicted RBP13.26□□□□□ -0.29
RDH11-208ENST00000556692 FBLN2P98095 1184 aa13.25□□□□□ -0.29
RDH11-208ENST00000556692 GABBR2O75899 941 aa13.24□□□□□ -0.29
RDH11-208ENST00000556692 ATXN8OSP0DMR3 200 aa13.11□□□□□ -0.31
RDH11-208ENST00000556692 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
RDH11-208ENST00000556692 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
RDH11-208ENST00000556692 ZBTB22O15209 634 aa13.04□□□□□ -0.32
RDH11-208ENST00000556692 SSUH2Q9Y2M2 353 aa13.03□□□□□ -0.32
RDH11-208ENST00000556692 PLSCR2Q9NRY7 297 aa13.01□□□□□ -0.33
RDH11-208ENST00000556692 PRR29P0C7W0 189 aa13□□□□□ -0.33
RDH11-208ENST00000556692 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
RDH11-208ENST00000556692 POTEIP0CG38 1075 aa12.91□□□□□ -0.34
RDH11-208ENST00000556692 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
RDH11-208ENST00000556692 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
RDH11-208ENST00000556692 DCBLD2Q96PD2 775 aa12.83□□□□□ -0.36
RDH11-208ENST00000556692 FARP1Q9Y4F1 1045 aaPredicted RBP12.82□□□□□ -0.36
RDH11-208ENST00000556692 CLCN6P51797 869 aa12.81□□□□□ -0.36
RDH11-208ENST00000556692 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
RDH11-208ENST00000556692 ZNF579Q8NAF0 562 aaKnown RBP12.63□□□□□ -0.39
RDH11-208ENST00000556692 OTUD5Q96G74 571 aa12.57□□□□□ -0.4
RDH11-208ENST00000556692 GALR2O43603 387 aaPredicted RBP12.55□□□□□ -0.4
RDH11-208ENST00000556692 POTEMA6NI47 508 aa12.54□□□□□ -0.4
RDH11-208ENST00000556692 POTEB2H3BUK9 544 aa12.48□□□□□ -0.41
RDH11-208ENST00000556692 POTEGQ6S5H5 508 aa12.48□□□□□ -0.41
RDH11-208ENST00000556692 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
RDH11-208ENST00000556692 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
RDH11-208ENST00000556692 PHF12Q96QT6 1004 aa12.4□□□□□ -0.42
RDH11-208ENST00000556692 STAG3Q9UJ98 1225 aa12.4□□□□□ -0.42
RDH11-208ENST00000556692 PELP1Q8IZL8 1130 aaKnown RBP12.34□□□□□ -0.43
RDH11-208ENST00000556692 PCDH10Q9P2E7 1040 aa12.34□□□□□ -0.43
RDH11-208ENST00000556692 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
RDH11-208ENST00000556692 METRNQ9UJH8 293 aa12.28□□□□□ -0.44
RDH11-208ENST00000556692 MAMSTRQ6ZN01 415 aa12.24□□□□□ -0.45
RDH11-208ENST00000556692 SLC39A7Q92504 469 aa12.24□□□□□ -0.45
RDH11-208ENST00000556692 C7P10643 843 aa12.23□□□□□ -0.45
RDH11-208ENST00000556692 ASTLQ6HA08 431 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms