RNA–Protein interactions for RNA: ENST00000364953.1

SNORD48-201, Transcript of small nucleolar RNA, C/D box 48, humanhuman

BASIC

Gene SNORD48, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD48-201ENST00000364953 NISCHQ9Y2I1 1504 aa3.83□□□□□ -1.8
SNORD48-201ENST00000364953 ZCCHC6Q5VYS8 1495 aaKnown RBP3.26□□□□□ -1.89
SNORD48-201ENST00000364953 CCDC180Q9P1Z9 1646 aa3.21□□□□□ -1.9
SNORD48-201ENST00000364953 DCAF1Q9Y4B6 1507 aa3.19□□□□□ -1.9
SNORD48-201ENST00000364953 SHROOM4Q9ULL8 1493 aa3.14□□□□□ -1.91
SNORD48-201ENST00000364953 MYO15BQ96JP2 1530 aa3.11□□□□□ -1.91
SNORD48-201ENST00000364953 CHIC1Q5VXU3 224 aa3.1□□□□□ -1.91
SNORD48-201ENST00000364953 SUPT5HO00267 1087 aaKnown RBP3.06□□□□□ -1.92
SNORD48-201ENST00000364953 RSF1Q96T23 1441 aaPredicted RBP3.04□□□□□ -1.92
SNORD48-201ENST00000364953 ABCC9O60706 1549 aa3.03□□□□□ -1.92
SNORD48-201ENST00000364953 CECR2Q9BXF3 1484 aa3□□□□□ -1.93
SNORD48-201ENST00000364953 NACADO15069 1562 aa2.99□□□□□ -1.93
SNORD48-201ENST00000364953 DCAF8L2P0C7V8 631 aa2.98□□□□□ -1.93
SNORD48-201ENST00000364953 EIF4G1Q04637 1599 aaKnown RBP2.98□□□□□ -1.93
SNORD48-201ENST00000364953 MROH2BQ7Z745 1585 aa2.97□□□□□ -1.93
SNORD48-201ENST00000364953 RB1CC1Q8TDY2 1594 aa2.97□□□□□ -1.93
SNORD48-201ENST00000364953 LOC105371045A0A1W2PR82 267 aa2.97□□□□□ -1.93
SNORD48-201ENST00000364953 HRCP23327 699 aa2.96□□□□□ -1.94
SNORD48-201ENST00000364953 SCRIBQ14160 1630 aa2.95□□□□□ -1.94
SNORD48-201ENST00000364953 WIZO95785 1651 aa2.91□□□□□ -1.94
SNORD48-201ENST00000364953 BAZ1AQ9NRL2 1556 aaPredicted RBP2.91□□□□□ -1.94
SNORD48-201ENST00000364953 BICRAQ9NZM4 1560 aa2.91□□□□□ -1.94
SNORD48-201ENST00000364953 PEG3Q9GZU2 1588 aa2.9□□□□□ -1.95
SNORD48-201ENST00000364953 CCDC88BA6NC98 1476 aa2.9□□□□□ -1.95
SNORD48-201ENST00000364953 TOP2AP11388 1531 aaKnown RBP2.89□□□□□ -1.95
SNORD48-201ENST00000364953 SMARCA2P51531 1590 aa2.89□□□□□ -1.95
SNORD48-201ENST00000364953 PPARGC1BQ86YN6 1023 aaKnown RBP2.89□□□□□ -1.95
SNORD48-201ENST00000364953 PCGF6Q9BYE7 350 aa2.89□□□□□ -1.95
SNORD48-201ENST00000364953 TRIM26Q12899 539 aaPredicted RBP2.88□□□□□ -1.95
SNORD48-201ENST00000364953 TRIM41Q8WV44 630 aa2.88□□□□□ -1.95
SNORD48-201ENST00000364953 SMARCA4P51532 1647 aa2.88□□□□□ -1.95
SNORD48-201ENST00000364953 WRNQ14191 1432 aaPredicted RBP eCLIP2.86□□□□□ -1.95
SNORD48-201ENST00000364953 RUSC2Q8N2Y8 1516 aa2.86□□□□□ -1.95
SNORD48-201ENST00000364953 SOGA1O94964 1423 aa2.85□□□□□ -1.95
SNORD48-201ENST00000364953 ATAD2BQ9ULI0 1458 aa2.84□□□□□ -1.95
SNORD48-201ENST00000364953 TNIKQ9UKE5 1360 aa2.84□□□□□ -1.96
SNORD48-201ENST00000364953 ABCC8Q09428 1581 aa2.83□□□□□ -1.96
SNORD48-201ENST00000364953 UNC13AQ9UPW8 1703 aa2.83□□□□□ -1.96
SNORD48-201ENST00000364953 EEA1Q15075 1411 aa2.82□□□□□ -1.96
SNORD48-201ENST00000364953 NCAPD3P42695 1498 aa2.82□□□□□ -1.96
SNORD48-201ENST00000364953 PABPN1Q86U42 306 aaKnown RBP eCLIP2.81□□□□□ -1.96
SNORD48-201ENST00000364953 FAM9AQ8IZU1 332 aaPredicted RBP2.81□□□□□ -1.96
SNORD48-201ENST00000364953 SYNJ1O43426 1573 aa2.81□□□□□ -1.96
SNORD48-201ENST00000364953 PRXQ9BXM0 1461 aa2.8□□□□□ -1.96
SNORD48-201ENST00000364953 CEP162Q5TB80 1403 aa2.8□□□□□ -1.96
SNORD48-201ENST00000364953 CSRNP3Q8WYN3 585 aa2.8□□□□□ -1.96
SNORD48-201ENST00000364953 KIF21BO75037 1637 aa2.79□□□□□ -1.96
SNORD48-201ENST00000364953 ZEB1P37275 1124 aaPredicted RBP2.78□□□□□ -1.96
SNORD48-201ENST00000364953 HMGXB3Q12766 1538 aa2.78□□□□□ -1.97
SNORD48-201ENST00000364953 CFTRP13569 1480 aa2.77□□□□□ -1.97
SNORD48-201ENST00000364953 GOLGA3Q08378 1498 aa2.77□□□□□ -1.97
SNORD48-201ENST00000364953 CLIP1P30622 1438 aa2.77□□□□□ -1.97
SNORD48-201ENST00000364953 TOP2BQ02880 1626 aa2.77□□□□□ -1.97
SNORD48-201ENST00000364953 BAZ1BQ9UIG0 1483 aaKnown RBP2.77□□□□□ -1.97
SNORD48-201ENST00000364953 CEP164Q9UPV0 1460 aa2.77□□□□□ -1.97
SNORD48-201ENST00000364953 RAPGEF2Q9Y4G8 1499 aa2.77□□□□□ -1.97
SNORD48-201ENST00000364953 BIVM-ERCC5R4GMW8 1640 aa2.76□□□□□ -1.97
SNORD48-201ENST00000364953 CUX1P39880 1505 aa2.76□□□□□ -1.97
SNORD48-201ENST00000364953 VPS8Q8N3P4 1428 aa2.76□□□□□ -1.97
SNORD48-201ENST00000364953 ARAP1Q96P48 1450 aa2.75□□□□□ -1.97
SNORD48-201ENST00000364953 IGF1RP08069 1367 aa2.74□□□□□ -1.97
SNORD48-201ENST00000364953 ERICH3Q5RHP9 1530 aa2.74□□□□□ -1.97
SNORD48-201ENST00000364953 CUX2O14529 1486 aa2.74□□□□□ -1.97
SNORD48-201ENST00000364953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.74□□□□□ -1.97
SNORD48-201ENST00000364953 RRBP1Q9P2E9 1410 aaKnown RBP2.73□□□□□ -1.97
SNORD48-201ENST00000364953 CADPSQ9ULU8 1353 aa2.73□□□□□ -1.97
SNORD48-201ENST00000364953 SCAF1Q9H7N4 1312 aaKnown RBP2.72□□□□□ -1.97
SNORD48-201ENST00000364953 ARHGAP35Q9NRY4 1499 aa2.72□□□□□ -1.97
SNORD48-201ENST00000364953 KANK4Q5T7N3 995 aaPredicted RBP2.72□□□□□ -1.97
SNORD48-201ENST00000364953 EHMT2Q96KQ7 1210 aa2.72□□□□□ -1.97
SNORD48-201ENST00000364953 MAP3K1Q13233 1512 aa2.71□□□□□ -1.98
SNORD48-201ENST00000364953 DHX57Q6P158 1386 aaKnown RBP2.71□□□□□ -1.98
SNORD48-201ENST00000364953 CLSPNQ9HAW4 1339 aa2.69□□□□□ -1.98
SNORD48-201ENST00000364953 KIF27Q86VH2 1401 aa2.69□□□□□ -1.98
SNORD48-201ENST00000364953 UBTFP17480 764 aaKnown RBP2.69□□□□□ -1.98
SNORD48-201ENST00000364953 NEUROD1Q13562 356 aa2.69□□□□□ -1.98
SNORD48-201ENST00000364953 ACIN1Q9UKV3 1341 aaKnown RBP2.68□□□□□ -1.98
SNORD48-201ENST00000364953 MAPKBP1O60336 1514 aa2.68□□□□□ -1.98
SNORD48-201ENST00000364953 ABCA10Q8WWZ4 1543 aa2.68□□□□□ -1.98
SNORD48-201ENST00000364953 ZNF316A6NFI3 1004 aaPredicted RBP2.68□□□□□ -1.98
SNORD48-201ENST00000364953 CCER1Q8TC90 406 aaPredicted RBP2.68□□□□□ -1.98
SNORD48-201ENST00000364953 DNAJC5BQ9UF47 199 aa2.68□□□□□ -1.98
SNORD48-201ENST00000364953 FGD5Q6ZNL6 1462 aa2.68□□□□□ -1.98
SNORD48-201ENST00000364953 POLA1P09884 1462 aaPredicted RBP2.67□□□□□ -1.98
SNORD48-201ENST00000364953 CARMIL1Q5VZK9 1371 aa2.67□□□□□ -1.98
SNORD48-201ENST00000364953 PHLDB1Q86UU1 1377 aa2.67□□□□□ -1.98
SNORD48-201ENST00000364953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.67□□□□□ -1.984e-21■■□□□ 11.4
SNORD48-201ENST00000364953 AQRO60306 1485 aaKnown RBP eCLIP2.66□□□□□ -1.981e-42■■■■■ 27.1
SNORD48-201ENST00000364953 DENND4BO75064 1496 aaPredicted RBP2.66□□□□□ -1.98
SNORD48-201ENST00000364953 SNAPC4Q5SXM2 1469 aa2.66□□□□□ -1.98
SNORD48-201ENST00000364953 LRRC9Q6ZRR7 1453 aa2.66□□□□□ -1.98
SNORD48-201ENST00000364953 FANCD2Q9BXW9 1451 aa2.66□□□□□ -1.98
SNORD48-201ENST00000364953 RAD54L2Q9Y4B4 1467 aa2.66□□□□□ -1.98
SNORD48-201ENST00000364953 DIEXFQ68CQ4 756 aaKnown RBP2.66□□□□□ -1.98
SNORD48-201ENST00000364953 CC2D2AQ9P2K1 1620 aa2.66□□□□□ -1.98
SNORD48-201ENST00000364953 ARHGEF11O15085 1522 aa2.66□□□□□ -1.98
SNORD48-201ENST00000364953 URB2Q14146 1524 aaKnown RBP2.66□□□□□ -1.98
SNORD48-201ENST00000364953 TOPBP1Q92547 1522 aa2.66□□□□□ -1.98
SNORD48-201ENST00000364953 KDM5BQ9UGL1 1544 aa2.66□□□□□ -1.98
SNORD48-201ENST00000364953 PTPRKQ15262 1439 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms