RNA–Protein interactions for RNA: ENST00000590261.5

ILF3-219, Transcript of interleukin enhancer binding factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ILF3, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-219ENST00000590261 NISCHQ9Y2I1 1504 aa27.2■■□□□ 1.94
ILF3-219ENST00000590261 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
ILF3-219ENST00000590261 DCAF8L2P0C7V8 631 aa23.36■■□□□ 1.33
ILF3-219ENST00000590261 ABCC9O60706 1549 aa23.13■■□□□ 1.29
ILF3-219ENST00000590261 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
ILF3-219ENST00000590261 ZCCHC6Q5VYS8 1495 aaKnown RBP22.75■■□□□ 1.23
ILF3-219ENST00000590261 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
ILF3-219ENST00000590261 DCAF1Q9Y4B6 1507 aa22.12■■□□□ 1.13
ILF3-219ENST00000590261 NACADO15069 1562 aa22.04■■□□□ 1.12
ILF3-219ENST00000590261 RB1CC1Q8TDY2 1594 aa22■■□□□ 1.11
ILF3-219ENST00000590261 PABPN1Q86U42 306 aaKnown RBP eCLIP21.98■■□□□ 1.111e-7■■□□□ 12.6
ILF3-219ENST00000590261 MYO15BQ96JP2 1530 aa21.86■■□□□ 1.09
ILF3-219ENST00000590261 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
ILF3-219ENST00000590261 UNC13AQ9UPW8 1703 aa21.62■■□□□ 1.05
ILF3-219ENST00000590261 CECR2Q9BXF3 1484 aa21.45■■□□□ 1.02
ILF3-219ENST00000590261 BICRAQ9NZM4 1560 aa21.45■■□□□ 1.02
ILF3-219ENST00000590261 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
ILF3-219ENST00000590261 RSF1Q96T23 1441 aaPredicted RBP21.16■□□□□ 0.98
ILF3-219ENST00000590261 WIZO95785 1651 aa21.01■□□□□ 0.95
ILF3-219ENST00000590261 BAZ1AQ9NRL2 1556 aaPredicted RBP20.95■□□□□ 0.94
ILF3-219ENST00000590261 SMARCA4P51532 1647 aa20.94■□□□□ 0.94
ILF3-219ENST00000590261 HRCP23327 699 aa20.93■□□□□ 0.94
ILF3-219ENST00000590261 PELP1Q8IZL8 1130 aaKnown RBP20.89■□□□□ 0.93
ILF3-219ENST00000590261 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
ILF3-219ENST00000590261 DNAJC5BQ9UF47 199 aa20.78■□□□□ 0.92
ILF3-219ENST00000590261 ATAD2BQ9ULI0 1458 aa20.73■□□□□ 0.91
ILF3-219ENST00000590261 CC2D2AQ9P2K1 1620 aa20.66■□□□□ 0.9
ILF3-219ENST00000590261 BAZ1BQ9UIG0 1483 aaKnown RBP20.64■□□□□ 0.9
ILF3-219ENST00000590261 TOP2AP11388 1531 aaKnown RBP20.55■□□□□ 0.88
ILF3-219ENST00000590261 SMARCA2P51531 1590 aa20.54■□□□□ 0.88
ILF3-219ENST00000590261 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
ILF3-219ENST00000590261 PEG3Q9GZU2 1588 aa20.45■□□□□ 0.86
ILF3-219ENST00000590261 NCAPD3P42695 1498 aa20.45■□□□□ 0.86
ILF3-219ENST00000590261 CHIC1Q5VXU3 224 aa20.44■□□□□ 0.86
ILF3-219ENST00000590261 EHMT2Q96KQ7 1210 aa20.31■□□□□ 0.84
ILF3-219ENST00000590261 HMGXB3Q12766 1538 aa20.3■□□□□ 0.84
ILF3-219ENST00000590261 MYT1Q01538 1121 aa20.29■□□□□ 0.84
ILF3-219ENST00000590261 FAM9AQ8IZU1 332 aaPredicted RBP20.27■□□□□ 0.83
ILF3-219ENST00000590261 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
ILF3-219ENST00000590261 NESP48681 1621 aa20.23■□□□□ 0.83
ILF3-219ENST00000590261 ABCC8Q09428 1581 aa20.23■□□□□ 0.83
ILF3-219ENST00000590261 PPARGC1BQ86YN6 1023 aaKnown RBP20.08■□□□□ 0.81
ILF3-219ENST00000590261 CADPSQ9ULU8 1353 aa20.06■□□□□ 0.8
ILF3-219ENST00000590261 PCGF6Q9BYE7 350 aa20.04■□□□□ 0.8
ILF3-219ENST00000590261 CFTRP13569 1480 aa20■□□□□ 0.79
ILF3-219ENST00000590261 LOC105371045A0A1W2PR82 267 aa19.97■□□□□ 0.79
ILF3-219ENST00000590261 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
ILF3-219ENST00000590261 FANCD2Q9BXW9 1451 aa19.89■□□□□ 0.77
ILF3-219ENST00000590261 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
ILF3-219ENST00000590261 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
ILF3-219ENST00000590261 SOGA1O94964 1423 aa19.81■□□□□ 0.76
ILF3-219ENST00000590261 RUSC2Q8N2Y8 1516 aa19.8■□□□□ 0.76
ILF3-219ENST00000590261 CUX1P39880 1505 aa19.77■□□□□ 0.76
ILF3-219ENST00000590261 ERCC6Q03468 1493 aa19.76■□□□□ 0.75
ILF3-219ENST00000590261 ZEB1P37275 1124 aaPredicted RBP19.76■□□□□ 0.75
ILF3-219ENST00000590261 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
ILF3-219ENST00000590261 LAMC3Q9Y6N6 1575 aa19.73■□□□□ 0.75
ILF3-219ENST00000590261 KIF21AQ7Z4S6 1674 aa19.73■□□□□ 0.75
ILF3-219ENST00000590261 PDS5BQ9NTI5 1447 aa19.73■□□□□ 0.75
ILF3-219ENST00000590261 RANGAP1P46060 587 aaPredicted RBP19.69■□□□□ 0.74
ILF3-219ENST00000590261 RAD54L2Q9Y4B4 1467 aa19.66■□□□□ 0.74
ILF3-219ENST00000590261 URB2Q14146 1524 aaKnown RBP19.66■□□□□ 0.74
ILF3-219ENST00000590261 TRIM26Q12899 539 aaPredicted RBP19.64■□□□□ 0.73
ILF3-219ENST00000590261 FGD5Q6ZNL6 1462 aa19.63■□□□□ 0.73
ILF3-219ENST00000590261 TOP2BQ02880 1626 aa19.6■□□□□ 0.73
ILF3-219ENST00000590261 TOPBP1Q92547 1522 aa19.6■□□□□ 0.73
ILF3-219ENST00000590261 PRDM2Q13029 1718 aa19.6■□□□□ 0.73
ILF3-219ENST00000590261 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
ILF3-219ENST00000590261 CSRNP3Q8WYN3 585 aa19.55■□□□□ 0.72
ILF3-219ENST00000590261 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
ILF3-219ENST00000590261 CUX2O14529 1486 aa19.53■□□□□ 0.72
ILF3-219ENST00000590261 UBTFP17480 764 aaKnown RBP19.52■□□□□ 0.72
ILF3-219ENST00000590261 BIVM-ERCC5R4GMW8 1640 aa19.5■□□□□ 0.71
ILF3-219ENST00000590261 DNMBPQ6XZF7 1577 aa19.49■□□□□ 0.71
ILF3-219ENST00000590261 MRC2Q9UBG0 1479 aa19.48■□□□□ 0.71
ILF3-219ENST00000590261 AQRO60306 1485 aaKnown RBP eCLIP19.42■□□□□ 0.74e-9■■■■□ 23.4
ILF3-219ENST00000590261 ZNF608Q9ULD9 1512 aaPredicted RBP19.39■□□□□ 0.69
ILF3-219ENST00000590261 KIF27Q86VH2 1401 aa19.39■□□□□ 0.69
ILF3-219ENST00000590261 ACIN1Q9UKV3 1341 aaKnown RBP19.36■□□□□ 0.69
ILF3-219ENST00000590261 FBLN2P98095 1184 aa19.36■□□□□ 0.69
ILF3-219ENST00000590261 RAPGEF2Q9Y4G8 1499 aa19.34■□□□□ 0.69
ILF3-219ENST00000590261 THOC2Q8NI27 1593 aaKnown RBP19.34■□□□□ 0.69
ILF3-219ENST00000590261 IGF1RP08069 1367 aa19.32■□□□□ 0.68
ILF3-219ENST00000590261 TTBK1Q5TCY1 1321 aaPredicted RBP19.3■□□□□ 0.68
ILF3-219ENST00000590261 WDR62O43379 1518 aa19.3■□□□□ 0.68
ILF3-219ENST00000590261 ABCA10Q8WWZ4 1543 aa19.26■□□□□ 0.67
ILF3-219ENST00000590261 GAPVD1Q14C86 1478 aa19.25■□□□□ 0.67
ILF3-219ENST00000590261 CARMIL1Q5VZK9 1371 aa19.24■□□□□ 0.67
ILF3-219ENST00000590261 EEA1Q15075 1411 aa19.23■□□□□ 0.67
ILF3-219ENST00000590261 TARBP1Q13395 1621 aaKnown RBP19.23■□□□□ 0.67
ILF3-219ENST00000590261 P3H3Q8IVL6 736 aa19.22■□□□□ 0.67
ILF3-219ENST00000590261 GOLGA3Q08378 1498 aa19.18■□□□□ 0.66
ILF3-219ENST00000590261 IFT140Q96RY7 1462 aa19.16■□□□□ 0.66
ILF3-219ENST00000590261 PRXQ9BXM0 1461 aa19.14■□□□□ 0.65
ILF3-219ENST00000590261 NEUROD1Q13562 356 aa19.13■□□□□ 0.65
ILF3-219ENST00000590261 WDR97A6NE52 1622 aa19.11■□□□□ 0.65
ILF3-219ENST00000590261 CEP162Q5TB80 1403 aa19.11■□□□□ 0.65
ILF3-219ENST00000590261 EIF4G3O43432 1585 aaKnown RBP19.11■□□□□ 0.65
ILF3-219ENST00000590261 CHMP7Q8WUX9 453 aaPredicted RBP19.1■□□□□ 0.65
ILF3-219ENST00000590261 CENPBP07199 599 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms