RNA–Protein interactions for RNA: ENST00000576268.1

PKMYT1-220, Transcript of protein kinase, membrane associated tyrosine/threonine 1, humanhuman

TSL 3

Gene PKMYT1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMYT1-220ENST00000576268 NISCHQ9Y2I1 1504 aa43.06■■■■■ 4.48
PKMYT1-220ENST00000576268 CCDC180Q9P1Z9 1646 aa38.52■■■■□ 3.76
PKMYT1-220ENST00000576268 ABCC9O60706 1549 aa38.46■■■■□ 3.75
PKMYT1-220ENST00000576268 RB1CC1Q8TDY2 1594 aa36.67■■■■□ 3.46
PKMYT1-220ENST00000576268 NACADO15069 1562 aa36.51■■■■□ 3.44
PKMYT1-220ENST00000576268 DNAJC5BQ9UF47 199 aa36.22■■■■□ 3.39
PKMYT1-220ENST00000576268 DCAF8L2P0C7V8 631 aa36.17■■■■□ 3.38
PKMYT1-220ENST00000576268 MYO15BQ96JP2 1530 aa36.16■■■■□ 3.38
PKMYT1-220ENST00000576268 PABPN1Q86U42 306 aaKnown RBP eCLIP35.87■■■■□ 3.33
PKMYT1-220ENST00000576268 UNC13AQ9UPW8 1703 aa35.68■■■■□ 3.3
PKMYT1-220ENST00000576268 ZCCHC6Q5VYS8 1495 aaKnown RBP35.67■■■■□ 3.3
PKMYT1-220ENST00000576268 DCAF1Q9Y4B6 1507 aa35.67■■■■□ 3.3
PKMYT1-220ENST00000576268 BICRAQ9NZM4 1560 aa35.64■■■■□ 3.3
PKMYT1-220ENST00000576268 SHROOM4Q9ULL8 1493 aa35.29■■■■□ 3.24
PKMYT1-220ENST00000576268 SCRIBQ14160 1630 aa34.98■■■■□ 3.19
PKMYT1-220ENST00000576268 CC2D2AQ9P2K1 1620 aa34.75■■■■□ 3.15
PKMYT1-220ENST00000576268 EIF4G1Q04637 1599 aaKnown RBP34.74■■■■□ 3.15
PKMYT1-220ENST00000576268 CECR2Q9BXF3 1484 aa34.71■■■■□ 3.15
PKMYT1-220ENST00000576268 NCAPD3P42695 1498 aa33.8■■■■□ 3
PKMYT1-220ENST00000576268 ATAD2BQ9ULI0 1458 aa33.63■■■□□ 2.97
PKMYT1-220ENST00000576268 SMARCA2P51531 1590 aa33.48■■■□□ 2.95
PKMYT1-220ENST00000576268 SMARCA4P51532 1647 aa33.48■■■□□ 2.95
PKMYT1-220ENST00000576268 HMGXB3Q12766 1538 aa33.44■■■□□ 2.94
PKMYT1-220ENST00000576268 BAZ1AQ9NRL2 1556 aaPredicted RBP33.38■■■□□ 2.93
PKMYT1-220ENST00000576268 PEG3Q9GZU2 1588 aa33.3■■■□□ 2.92
PKMYT1-220ENST00000576268 DNAJC5Q9H3Z4 198 aa33.28■■■□□ 2.92
PKMYT1-220ENST00000576268 CUX2O14529 1486 aa33.25■■■□□ 2.91
PKMYT1-220ENST00000576268 BAZ1BQ9UIG0 1483 aaKnown RBP33.21■■■□□ 2.91
PKMYT1-220ENST00000576268 ERCC6Q03468 1493 aa33.18■■■□□ 2.9
PKMYT1-220ENST00000576268 MROH2BQ7Z745 1585 aa33.13■■■□□ 2.89
PKMYT1-220ENST00000576268 NESP48681 1621 aa33.06■■■□□ 2.88
PKMYT1-220ENST00000576268 LAMC3Q9Y6N6 1575 aa32.9■■■□□ 2.86
PKMYT1-220ENST00000576268 PDS5BQ9NTI5 1447 aa32.77■■■□□ 2.84
PKMYT1-220ENST00000576268 CADPSQ9ULU8 1353 aa32.73■■■□□ 2.83
PKMYT1-220ENST00000576268 THOC2Q8NI27 1593 aaKnown RBP32.71■■■□□ 2.83
PKMYT1-220ENST00000576268 RSF1Q96T23 1441 aaPredicted RBP32.66■■■□□ 2.82
PKMYT1-220ENST00000576268 WIZO95785 1651 aa32.62■■■□□ 2.81
PKMYT1-220ENST00000576268 SUPT5HO00267 1087 aaKnown RBP32.53■■■□□ 2.8
PKMYT1-220ENST00000576268 KIF21AQ7Z4S6 1674 aa32.52■■■□□ 2.8
PKMYT1-220ENST00000576268 MRC2Q9UBG0 1479 aa32.42■■■□□ 2.78
PKMYT1-220ENST00000576268 CFTRP13569 1480 aa32.36■■■□□ 2.77
PKMYT1-220ENST00000576268 WDR62O43379 1518 aa32.35■■■□□ 2.77
PKMYT1-220ENST00000576268 TOP2AP11388 1531 aaKnown RBP32.31■■■□□ 2.76
PKMYT1-220ENST00000576268 FANCD2Q9BXW9 1451 aa32.27■■■□□ 2.76
PKMYT1-220ENST00000576268 CEP164Q9UPV0 1460 aa32.27■■■□□ 2.76
PKMYT1-220ENST00000576268 URB2Q14146 1524 aaKnown RBP32■■■□□ 2.71
PKMYT1-220ENST00000576268 CCDC88BA6NC98 1476 aa31.98■■■□□ 2.71
PKMYT1-220ENST00000576268 OSCARQ8IYS5 282 aa31.78■■■□□ 2.68
PKMYT1-220ENST00000576268 PRDM2Q13029 1718 aa31.76■■■□□ 2.67
PKMYT1-220ENST00000576268 IFT140Q96RY7 1462 aa31.69■■■□□ 2.66
PKMYT1-220ENST00000576268 ABCC8Q09428 1581 aa31.68■■■□□ 2.66
PKMYT1-220ENST00000576268 TOPBP1Q92547 1522 aa31.66■■■□□ 2.66
PKMYT1-220ENST00000576268 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
PKMYT1-220ENST00000576268 ZNF608Q9ULD9 1512 aaPredicted RBP31.58■■■□□ 2.65
PKMYT1-220ENST00000576268 DNMBPQ6XZF7 1577 aa31.51■■■□□ 2.64
PKMYT1-220ENST00000576268 TARBP1Q13395 1621 aaKnown RBP31.37■■■□□ 2.61
PKMYT1-220ENST00000576268 POLA1P09884 1462 aaPredicted RBP31.34■■■□□ 2.61
PKMYT1-220ENST00000576268 AQRO60306 1485 aaKnown RBP eCLIP31.32■■■□□ 2.69e-7■■■■■ 29.6
PKMYT1-220ENST00000576268 EIF4G3O43432 1585 aaKnown RBP31.31■■■□□ 2.6
PKMYT1-220ENST00000576268 SOGA1O94964 1423 aa31.24■■■□□ 2.59
PKMYT1-220ENST00000576268 RAD54L2Q9Y4B4 1467 aa31.19■■■□□ 2.58
PKMYT1-220ENST00000576268 RIMBP3CA6NJZ7 1639 aa31.18■■■□□ 2.58
PKMYT1-220ENST00000576268 RIMBP3BA6NNM3 1639 aa31.18■■■□□ 2.58
PKMYT1-220ENST00000576268 RIMBP3Q9UFD9 1639 aa31.18■■■□□ 2.58
PKMYT1-220ENST00000576268 ARHGEF11O15085 1522 aa31.16■■■□□ 2.58
PKMYT1-220ENST00000576268 TDRD9Q8NDG6 1382 aaKnown RBP31.14■■■□□ 2.58
PKMYT1-220ENST00000576268 FGD5Q6ZNL6 1462 aa31.12■■■□□ 2.57
PKMYT1-220ENST00000576268 CUX1P39880 1505 aa31.11■■■□□ 2.57
PKMYT1-220ENST00000576268 WDR97A6NE52 1622 aa31.1■■■□□ 2.57
PKMYT1-220ENST00000576268 FBLN2P98095 1184 aa31.02■■■□□ 2.56
PKMYT1-220ENST00000576268 CHD1O14646 1710 aa30.99■■■□□ 2.55
PKMYT1-220ENST00000576268 MAGI1Q96QZ7 1491 aaPredicted RBP30.95■■■□□ 2.55
PKMYT1-220ENST00000576268 CYB5RLQ6IPT4 315 aa30.95■■■□□ 2.55
PKMYT1-220ENST00000576268 GRIN2BQ13224 1484 aa30.95■■■□□ 2.54
PKMYT1-220ENST00000576268 SNAPC4Q5SXM2 1469 aa30.95■■■□□ 2.54
PKMYT1-220ENST00000576268 CHMP7Q8WUX9 453 aaPredicted RBP30.89■■■□□ 2.54
PKMYT1-220ENST00000576268 ARAP1Q96P48 1450 aa30.87■■■□□ 2.53
PKMYT1-220ENST00000576268 ABCA10Q8WWZ4 1543 aa30.84■■■□□ 2.53
PKMYT1-220ENST00000576268 SYNJ2O15056 1496 aa30.84■■■□□ 2.53
PKMYT1-220ENST00000576268 CLASP1Q7Z460 1538 aa30.83■■■□□ 2.53
PKMYT1-220ENST00000576268 WRNQ14191 1432 aaPredicted RBP eCLIP30.83■■■□□ 2.531e-7■■□□□ 12.5
PKMYT1-220ENST00000576268 GAPVD1Q14C86 1478 aa30.82■■■□□ 2.53
PKMYT1-220ENST00000576268 SYNJ1O43426 1573 aa30.75■■■□□ 2.51
PKMYT1-220ENST00000576268 ABCA5Q8WWZ7 1642 aa30.7■■■□□ 2.51
PKMYT1-220ENST00000576268 TOP2BQ02880 1626 aa30.62■■■□□ 2.49
PKMYT1-220ENST00000576268 PBRM1Q86U86 1689 aa30.62■■■□□ 2.49
PKMYT1-220ENST00000576268 CHIC1Q5VXU3 224 aa30.58■■■□□ 2.49
PKMYT1-220ENST00000576268 BIVM-ERCC5R4GMW8 1640 aa30.58■■■□□ 2.49
PKMYT1-220ENST00000576268 GRIN2AQ12879 1464 aa30.53■■■□□ 2.48
PKMYT1-220ENST00000576268 TRHP20396 242 aaPredicted RBP30.51■■■□□ 2.47
PKMYT1-220ENST00000576268 NUP160Q12769 1436 aa30.5■■■□□ 2.47
PKMYT1-220ENST00000576268 FHAD1B1AJZ9 1412 aa30.47■■■□□ 2.47
PKMYT1-220ENST00000576268 ERICH3Q5RHP9 1530 aa30.44■■■□□ 2.46
PKMYT1-220ENST00000576268 ADAMTS12P58397 1594 aa30.44■■■□□ 2.46
PKMYT1-220ENST00000576268 CEP170Q5SW79 1584 aa30.36■■■□□ 2.45
PKMYT1-220ENST00000576268 SHROOM2Q13796 1616 aa30.28■■■□□ 2.44
PKMYT1-220ENST00000576268 ERCC6L2Q5T890 1561 aa30.28■■■□□ 2.44
PKMYT1-220ENST00000576268 JPH4Q96JJ6 628 aa30.2■■■□□ 2.43
PKMYT1-220ENST00000576268 KIF27Q86VH2 1401 aa30.17■■■□□ 2.42
PKMYT1-220ENST00000576268 IGF1RP08069 1367 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms