Protein–RNA interactions for Protein: Q9UNX4

WDR3, WD repeat-containing protein 3, humanhuman

Known RBP eCLIP

Length 943 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR3Q9UNX4 SCARNA2-201ENST00000458748 420 ntBASIC18.39■□□□□ 0.531e-323■□□□□ 9.7
WDR3Q9UNX4 AL356488.2-201ENST00000602755 427 ntBASIC18.16■□□□□ 0.51e-323■□□□□ 9.7
WDR3Q9UNX4 AC007952.4-201ENST00000573866 637 ntBASIC14.61□□□□□ -0.071e-323■■■■■ 281.4
WDR3Q9UNX4 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.221e-323■□□□□ 10.8
WDR3Q9UNX4 SNORD3C-201ENST00000580533 581 ntBASIC12.45□□□□□ -0.421e-323■■■■■ 97.5
WDR3Q9UNX4 SNORD3A-203ENST00000625876 217 nt11.87□□□□□ -0.511e-323■■■■■ 47.8
WDR3Q9UNX4 SNORD3C-203ENST00000625845 217 nt11.87□□□□□ -0.511e-323■■■■■ 97.5
WDR3Q9UNX4 SNORD3D-202ENST00000630092 217 ntBASIC11.87□□□□□ -0.511e-323■■■■■ 281.4
WDR3Q9UNX4 SNORD3A-202ENST00000620232 218 nt11.7□□□□□ -0.541e-323■■■■■ 47.8
WDR3Q9UNX4 SNORD3D-201ENST00000619178 218 ntBASIC11.7□□□□□ -0.541e-323■■■■■ 281.4
WDR3Q9UNX4 SNORD3C-202ENST00000620446 218 nt11.7□□□□□ -0.541e-323■■■■■ 97.5
WDR3Q9UNX4 SNORD3A-201ENST00000584923 699 ntBASIC11□□□□□ -0.651e-323■■■■■ 47.8
WDR3Q9UNX4 SCARNA7-201ENST00000458797 330 ntBASIC10.77□□□□□ -0.691e-323■□□□□ 10.8
WDR3Q9UNX4 SCARNA9-201ENST00000530422 353 ntBASIC10.65□□□□□ -0.71e-323■□□□□ 10
WDR3Q9UNX4 KPNA4-203ENST00000483437 510 ntTSL 55.91□□□□□ -1.461e-323■□□□□ 10.8
WDR3Q9UNX4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.51e-323■□□□□ 10
WDR3Q9UNX4 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 44.66□□□□□ -1.661e-323■□□□□ 10
WDR3Q9UNX4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.671e-323■□□□□ 10
WDR3Q9UNX4 snoU2-30.2-201ENST00000362805 70 ntBASIC2.77□□□□□ -1.971e-323■□□□□ 9.8
WDR3Q9UNX4 NEAT1-202ENST00000501122 22743 ntBASIC5.46□□□□□ -1.532e-63■□□□□ 8.1
WDR3Q9UNX4 TRRAP-203ENST00000417523 550 ntTSL 417.31■□□□□ 0.364e-51■□□□□ 8.7
WDR3Q9UNX4 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.174e-51■□□□□ 8.7
WDR3Q9UNX4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.184e-51■□□□□ 8.7
WDR3Q9UNX4 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.24e-51■□□□□ 8.7
WDR3Q9UNX4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.44e-51■□□□□ 8.7
WDR3Q9UNX4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.426e-37■□□□□ 9.6
WDR3Q9UNX4 GPI-208ENST00000588991 2021 ntTSL 221.76■■□□□ 1.076e-37■□□□□ 9.6
WDR3Q9UNX4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.14■□□□□ 0.176e-37■□□□□ 9.6
WDR3Q9UNX4 GPI-202ENST00000415930 4000 ntTSL 2 BASIC8.31□□□□□ -1.086e-37■□□□□ 9.6
WDR3Q9UNX4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.953e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.713e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.683e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.593e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.543e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.543e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.163e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.163e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.093e-29■□□□□ 11.2
WDR3Q9UNX4 SNORD48-201ENST00000364953 64 ntBASIC1.84□□□□□ -2.113e-29■□□□□ 11.2
WDR3Q9UNX4 SNORD3B-1-201ENST00000577988 758 ntBASIC14.67□□□□□ -0.063e-25■■■■■ 327.1
WDR3Q9UNX4 SNORD3B-1-203ENST00000631292 217 nt11.87□□□□□ -0.513e-25■■■■■ 327.1
WDR3Q9UNX4 SNORD3B-1-202ENST00000617128 218 nt11.7□□□□□ -0.543e-25■■■■■ 327.1
WDR3Q9UNX4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.583e-23■■□□□ 11.9
WDR3Q9UNX4 RPS12-202ENST00000484616 639 ntTSL 24.18□□□□□ -1.743e-23■■□□□ 11.9
WDR3Q9UNX4 SNORD101-201ENST00000384027 73 ntBASIC0.98□□□□□ -2.253e-23■■□□□ 11.9
WDR3Q9UNX4 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC13.28□□□□□ -0.281e-12■■■■■ 119.3
WDR3Q9UNX4 TSPEAR-AS2-203ENST00000465978 345 ntTSL 512.85□□□□□ -0.351e-12■■■■■ 119.3
WDR3Q9UNX4 PSME4-208ENST00000481518 886 ntTSL 524.16■■□□□ 1.461e-12■■□□□ 13.8
WDR3Q9UNX4 PSME4-201ENST00000389993 6581 ntTSL 1 (best)15.13■□□□□ 0.011e-12■■□□□ 13.8
WDR3Q9UNX4 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.131e-12■■□□□ 13.8
WDR3Q9UNX4 UBE2H-208ENST00000490974 572 ntTSL 523.95■■□□□ 1.426e-12■■■■■ 102.8
WDR3Q9UNX4 UBE2H-203ENST00000472396 758 ntTSL 522.64■■□□□ 1.216e-12■■■■■ 102.8
WDR3Q9UNX4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.856e-12■■■■■ 102.8
WDR3Q9UNX4 LDB1-204ENST00000490751 762 ntTSL 232.89■■■□□ 2.862e-11■□□□□ 9.7
WDR3Q9UNX4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.11■■■□□ 2.092e-11■□□□□ 9.7
WDR3Q9UNX4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.42e-11■□□□□ 9.7
WDR3Q9UNX4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.65e-11■□□□□ 9.2
WDR3Q9UNX4 GMPR-203ENST00000543191 675 ntTSL 210.81□□□□□ -0.685e-11■□□□□ 9.2
WDR3Q9UNX4 EGFL7-206ENST00000492002 654 ntTSL 524.16■■□□□ 1.461e-10■■■■■ 27.7
WDR3Q9UNX4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.081e-10■■■■■ 27.7
WDR3Q9UNX4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.971e-10■■■■■ 27.7
WDR3Q9UNX4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.81e-10■■■■■ 27.7
WDR3Q9UNX4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.741e-10■■■■■ 27.7
WDR3Q9UNX4 EGFL7-207ENST00000492862 723 ntTSL 518.76■□□□□ 0.591e-10■■■■■ 27.7
WDR3Q9UNX4 EGFL7-205ENST00000490469 456 ntTSL 518.05■□□□□ 0.481e-10■■■■■ 27.7
WDR3Q9UNX4 THRA-205ENST00000577288 581 ntTSL 426.88■■□□□ 1.894e-10■■■■■ 87
WDR3Q9UNX4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.84■■□□□ 1.894e-10■■■■■ 87
WDR3Q9UNX4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.59■■□□□ 1.854e-10■■■■■ 87
WDR3Q9UNX4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.824e-10■■■■■ 87
WDR3Q9UNX4 THRA-210ENST00000585047 574 ntTSL 426.02■■□□□ 1.764e-10■■■■■ 87
WDR3Q9UNX4 THRA-208ENST00000578218 907 ntTSL 425.96■■□□□ 1.754e-10■■■■■ 87
WDR3Q9UNX4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.17■■□□□ 1.464e-10■■■■■ 87
WDR3Q9UNX4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.91■■□□□ 1.424e-10■■■■■ 87
WDR3Q9UNX4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.79■■□□□ 1.44e-10■■■■■ 87
WDR3Q9UNX4 APC-205ENST00000505350 573 ntTSL 322.49■■□□□ 1.194e-10■■■■■ 87
WDR3Q9UNX4 APC-209ENST00000509732 524 ntTSL 422.49■■□□□ 1.194e-10■■■■■ 87
WDR3Q9UNX4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.854e-10■■■■■ 87
WDR3Q9UNX4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.674e-10■■■■■ 87
WDR3Q9UNX4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.594e-10■■■■■ 87
WDR3Q9UNX4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.274e-10■■■■■ 87
WDR3Q9UNX4 APC-206ENST00000507379 3602 ntTSL 215.3■□□□□ 0.044e-10■■■■■ 87
WDR3Q9UNX4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.5■□□□□ 0.074e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-222ENST00000451607 1007 ntTSL 5 BASIC12□□□□□ -0.494e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-224ENST00000454068 688 ntTSL 5 BASIC10.46□□□□□ -0.734e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-214ENST00000436656 822 ntTSL 39.98□□□□□ -0.814e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-216ENST00000443799 897 ntTSL 59.98□□□□□ -0.814e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-203ENST00000416952 799 ntTSL 29.31□□□□□ -0.924e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-210ENST00000431268 1698 ntTSL 29.29□□□□□ -0.924e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-219ENST00000449289 542 ntTSL 3 BASIC8.54□□□□□ -1.044e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-220ENST00000449589 712 ntTSL 38.54□□□□□ -1.044e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-226ENST00000455838 632 ntTSL 28.54□□□□□ -1.044e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-227ENST00000456293 583 ntTSL 37.59□□□□□ -1.194e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.55□□□□□ -1.24e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-228ENST00000456812 723 ntTSL 37.27□□□□□ -1.254e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-215ENST00000442067 1114 ntTSL 27.05□□□□□ -1.284e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-206ENST00000422183 745 ntTSL 26.53□□□□□ -1.364e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.21□□□□□ -1.424e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-201ENST00000412059 979 ntTSL 55.84□□□□□ -1.474e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-204ENST00000421068 1060 ntTSL 25.38□□□□□ -1.554e-10■□□□□ 8.3
WDR3Q9UNX4 GAS5-205ENST00000422008 497 ntTSL 35.09□□□□□ -1.594e-10■□□□□ 8.3
Retrieved 100 of 1,750 protein–RNA pairs in 11.6 ms