RNA–Protein interactions for RNA: ENST00000407004.7

ILF3-202, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best) BASIC

Gene ILF3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-202ENST00000407004 NISCHQ9Y2I1 1504 aa27.2■■□□□ 1.94
ILF3-202ENST00000407004 CCDC180Q9P1Z9 1646 aa24.34■■□□□ 1.49
ILF3-202ENST00000407004 DCAF1Q9Y4B6 1507 aa22.94■■□□□ 1.26
ILF3-202ENST00000407004 MYO15BQ96JP2 1530 aa22.92■■□□□ 1.26
ILF3-202ENST00000407004 ZCCHC6Q5VYS8 1495 aaKnown RBP22.86■■□□□ 1.25
ILF3-202ENST00000407004 NACADO15069 1562 aa22.58■■□□□ 1.2
ILF3-202ENST00000407004 ABCC9O60706 1549 aa22.44■■□□□ 1.18
ILF3-202ENST00000407004 RB1CC1Q8TDY2 1594 aa22.36■■□□□ 1.17
ILF3-202ENST00000407004 SHROOM4Q9ULL8 1493 aa21.93■■□□□ 1.1
ILF3-202ENST00000407004 UNC13AQ9UPW8 1703 aa21.91■■□□□ 1.1
ILF3-202ENST00000407004 BICRAQ9NZM4 1560 aa21.65■■□□□ 1.06
ILF3-202ENST00000407004 SCRIBQ14160 1630 aa21.62■■□□□ 1.05
ILF3-202ENST00000407004 DCAF8L2P0C7V8 631 aa21.4■■□□□ 1.02
ILF3-202ENST00000407004 PEG3Q9GZU2 1588 aa21.1■□□□□ 0.97
ILF3-202ENST00000407004 BAZ1AQ9NRL2 1556 aaPredicted RBP21.09■□□□□ 0.97
ILF3-202ENST00000407004 SMARCA4P51532 1647 aa21.03■□□□□ 0.96
ILF3-202ENST00000407004 EIF4G1Q04637 1599 aaKnown RBP20.94■□□□□ 0.94
ILF3-202ENST00000407004 SMARCA2P51531 1590 aa20.83■□□□□ 0.92
ILF3-202ENST00000407004 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
ILF3-202ENST00000407004 HMGXB3Q12766 1538 aa20.81■□□□□ 0.92
ILF3-202ENST00000407004 MROH2BQ7Z745 1585 aa20.8■□□□□ 0.92
ILF3-202ENST00000407004 PABPN1Q86U42 306 aaKnown RBP eCLIP20.78■□□□□ 0.921e-7■■□□□ 13.1
ILF3-202ENST00000407004 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
ILF3-202ENST00000407004 NCAPD3P42695 1498 aa20.72■□□□□ 0.91
ILF3-202ENST00000407004 ATAD2BQ9ULI0 1458 aa20.67■□□□□ 0.9
ILF3-202ENST00000407004 CC2D2AQ9P2K1 1620 aa20.66■□□□□ 0.9
ILF3-202ENST00000407004 TOP2AP11388 1531 aaKnown RBP20.65■□□□□ 0.9
ILF3-202ENST00000407004 WIZO95785 1651 aa20.6■□□□□ 0.89
ILF3-202ENST00000407004 PELP1Q8IZL8 1130 aaKnown RBP20.5■□□□□ 0.87
ILF3-202ENST00000407004 BAZ1BQ9UIG0 1483 aaKnown RBP20.44■□□□□ 0.86
ILF3-202ENST00000407004 PRDM2Q13029 1718 aa20.33■□□□□ 0.85
ILF3-202ENST00000407004 CCDC88BA6NC98 1476 aa20.17■□□□□ 0.82
ILF3-202ENST00000407004 LAMC3Q9Y6N6 1575 aa20.15■□□□□ 0.82
ILF3-202ENST00000407004 MYT1Q01538 1121 aa20.09■□□□□ 0.81
ILF3-202ENST00000407004 CFTRP13569 1480 aa20.08■□□□□ 0.8
ILF3-202ENST00000407004 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
ILF3-202ENST00000407004 CADPSQ9ULU8 1353 aa19.94■□□□□ 0.78
ILF3-202ENST00000407004 HRCP23327 699 aa19.94■□□□□ 0.78
ILF3-202ENST00000407004 PRKCSHP14314 528 aaPredicted RBP19.89■□□□□ 0.78
ILF3-202ENST00000407004 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
ILF3-202ENST00000407004 BIVM-ERCC5R4GMW8 1640 aa19.79■□□□□ 0.76
ILF3-202ENST00000407004 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
ILF3-202ENST00000407004 ABCC8Q09428 1581 aa19.75■□□□□ 0.75
ILF3-202ENST00000407004 KIF21AQ7Z4S6 1674 aa19.72■□□□□ 0.75
ILF3-202ENST00000407004 PPARGC1BQ86YN6 1023 aaKnown RBP19.7■□□□□ 0.74
ILF3-202ENST00000407004 THOC2Q8NI27 1593 aaKnown RBP19.68■□□□□ 0.74
ILF3-202ENST00000407004 FANCD2Q9BXW9 1451 aa19.68■□□□□ 0.74
ILF3-202ENST00000407004 TOP2BQ02880 1626 aa19.68■□□□□ 0.74
ILF3-202ENST00000407004 WDR97A6NE52 1622 aa19.67■□□□□ 0.74
ILF3-202ENST00000407004 WDR62O43379 1518 aa19.67■□□□□ 0.74
ILF3-202ENST00000407004 DNMBPQ6XZF7 1577 aa19.67■□□□□ 0.74
ILF3-202ENST00000407004 CEP164Q9UPV0 1460 aa19.64■□□□□ 0.74
ILF3-202ENST00000407004 NESP48681 1621 aa19.63■□□□□ 0.73
ILF3-202ENST00000407004 MRC2Q9UBG0 1479 aa19.59■□□□□ 0.73
ILF3-202ENST00000407004 CUX1P39880 1505 aa19.54■□□□□ 0.72
ILF3-202ENST00000407004 SYNJ1O43426 1573 aa19.51■□□□□ 0.71
ILF3-202ENST00000407004 PCGF6Q9BYE7 350 aa19.5■□□□□ 0.71
ILF3-202ENST00000407004 WRNQ14191 1432 aaPredicted RBP eCLIP19.5■□□□□ 0.71
ILF3-202ENST00000407004 TOPBP1Q92547 1522 aa19.5■□□□□ 0.71
ILF3-202ENST00000407004 URB2Q14146 1524 aaKnown RBP19.5■□□□□ 0.71
ILF3-202ENST00000407004 CUX2O14529 1486 aa19.43■□□□□ 0.7
ILF3-202ENST00000407004 TARBP1Q13395 1621 aaKnown RBP19.41■□□□□ 0.7
ILF3-202ENST00000407004 ABCA10Q8WWZ4 1543 aa19.36■□□□□ 0.69
ILF3-202ENST00000407004 ERCC6Q03468 1493 aa19.35■□□□□ 0.69
ILF3-202ENST00000407004 IFT140Q96RY7 1462 aa19.33■□□□□ 0.69
ILF3-202ENST00000407004 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
ILF3-202ENST00000407004 EEA1Q15075 1411 aa19.32■□□□□ 0.68
ILF3-202ENST00000407004 POLA1P09884 1462 aaPredicted RBP19.32■□□□□ 0.68
ILF3-202ENST00000407004 FGD5Q6ZNL6 1462 aa19.31■□□□□ 0.68
ILF3-202ENST00000407004 SLC24A1O60721 1099 aa19.24■□□□□ 0.67
ILF3-202ENST00000407004 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
ILF3-202ENST00000407004 BCL11AQ9H165 835 aa19.21■□□□□ 0.67
ILF3-202ENST00000407004 SCAF1Q9H7N4 1312 aaKnown RBP19.21■□□□□ 0.67
ILF3-202ENST00000407004 ERICH3Q5RHP9 1530 aa19.21■□□□□ 0.66
ILF3-202ENST00000407004 CUL7Q14999 1698 aa19.19■□□□□ 0.66
ILF3-202ENST00000407004 TTBK1Q5TCY1 1321 aaPredicted RBP19.18■□□□□ 0.66
ILF3-202ENST00000407004 PBRM1Q86U86 1689 aa19.18■□□□□ 0.66
ILF3-202ENST00000407004 SOGA1O94964 1423 aa19.13■□□□□ 0.65
ILF3-202ENST00000407004 KIF21BO75037 1637 aa19.12■□□□□ 0.65
ILF3-202ENST00000407004 EIF4G3O43432 1585 aaKnown RBP19.11■□□□□ 0.65
ILF3-202ENST00000407004 KIF27Q86VH2 1401 aa19.09■□□□□ 0.65
ILF3-202ENST00000407004 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
ILF3-202ENST00000407004 ADAMTS12P58397 1594 aa19.03■□□□□ 0.64
ILF3-202ENST00000407004 RAD54L2Q9Y4B4 1467 aa19.02■□□□□ 0.64
ILF3-202ENST00000407004 FAM9AQ8IZU1 332 aaPredicted RBP19.02■□□□□ 0.64
ILF3-202ENST00000407004 GRIN2BQ13224 1484 aa19.02■□□□□ 0.63
ILF3-202ENST00000407004 TRIM41Q8WV44 630 aa19.02■□□□□ 0.63
ILF3-202ENST00000407004 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
ILF3-202ENST00000407004 PRXQ9BXM0 1461 aa19■□□□□ 0.63
ILF3-202ENST00000407004 ERICH6Q7L0X2 663 aa18.99■□□□□ 0.63
ILF3-202ENST00000407004 ZNF608Q9ULD9 1512 aaPredicted RBP18.91■□□□□ 0.62
ILF3-202ENST00000407004 IGF1RP08069 1367 aa18.9■□□□□ 0.62
ILF3-202ENST00000407004 FHAD1B1AJZ9 1412 aa18.9■□□□□ 0.62
ILF3-202ENST00000407004 SYNJ2O15056 1496 aa18.86■□□□□ 0.61
ILF3-202ENST00000407004 CTTNBP2Q8WZ74 1663 aa18.86■□□□□ 0.61
ILF3-202ENST00000407004 RUSC2Q8N2Y8 1516 aa18.84■□□□□ 0.61
ILF3-202ENST00000407004 RAPGEF2Q9Y4G8 1499 aa18.83■□□□□ 0.61
ILF3-202ENST00000407004 APLP2Q06481 763 aa18.81■□□□□ 0.6
ILF3-202ENST00000407004 GOLGA3Q08378 1498 aa18.8■□□□□ 0.6
ILF3-202ENST00000407004 SNAPC4Q5SXM2 1469 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms