RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 NISCHQ9Y2I1 1504 aa48.87■■■■■ 5.41
C6orf48-205ENST00000375640 CCDC180Q9P1Z9 1646 aa43.4■■■■■ 4.54
C6orf48-205ENST00000375640 ABCC9O60706 1549 aa42.95■■■■■ 4.47
C6orf48-205ENST00000375640 DCAF8L2P0C7V8 631 aa41.13■■■■■ 4.17
C6orf48-205ENST00000375640 RB1CC1Q8TDY2 1594 aa41.12■■■■■ 4.17
C6orf48-205ENST00000375640 NACADO15069 1562 aa41.04■■■■■ 4.16
C6orf48-205ENST00000375640 MYO15BQ96JP2 1530 aa40.74■■■■■ 4.11
C6orf48-205ENST00000375640 ZCCHC6Q5VYS8 1495 aaKnown RBP40.61■■■■■ 4.09
C6orf48-205ENST00000375640 DCAF1Q9Y4B6 1507 aa40.42■■■■■ 4.06
C6orf48-205ENST00000375640 PABPN1Q86U42 306 aaKnown RBP eCLIP40.2■■■■■ 4.03
C6orf48-205ENST00000375640 UNC13AQ9UPW8 1703 aa39.91■■■■□ 3.98
C6orf48-205ENST00000375640 BICRAQ9NZM4 1560 aa39.85■■■■□ 3.97
C6orf48-205ENST00000375640 DNAJC5BQ9UF47 199 aa39.84■■■■□ 3.97
C6orf48-205ENST00000375640 SCRIBQ14160 1630 aa39.62■■■■□ 3.93
C6orf48-205ENST00000375640 SHROOM4Q9ULL8 1493 aa39.5■■■■□ 3.91
C6orf48-205ENST00000375640 EIF4G1Q04637 1599 aaKnown RBP38.86■■■■□ 3.81
C6orf48-205ENST00000375640 CC2D2AQ9P2K1 1620 aa38.75■■■■□ 3.79
C6orf48-205ENST00000375640 CECR2Q9BXF3 1484 aa38.66■■■■□ 3.78
C6orf48-205ENST00000375640 NCAPD3P42695 1498 aa37.96■■■■□ 3.67
C6orf48-205ENST00000375640 ATAD2BQ9ULI0 1458 aa37.9■■■■□ 3.66
C6orf48-205ENST00000375640 SMARCA4P51532 1647 aa37.88■■■■□ 3.65
C6orf48-205ENST00000375640 BAZ1AQ9NRL2 1556 aaPredicted RBP37.87■■■■□ 3.65
C6orf48-205ENST00000375640 SMARCA2P51531 1590 aa37.78■■■■□ 3.64
C6orf48-205ENST00000375640 MROH2BQ7Z745 1585 aa37.63■■■■□ 3.62
C6orf48-205ENST00000375640 HMGXB3Q12766 1538 aa37.62■■■■□ 3.61
C6orf48-205ENST00000375640 PEG3Q9GZU2 1588 aa37.57■■■■□ 3.6
C6orf48-205ENST00000375640 BAZ1BQ9UIG0 1483 aaKnown RBP37.53■■■■□ 3.6
C6orf48-205ENST00000375640 RSF1Q96T23 1441 aaPredicted RBP37.18■■■■□ 3.54
C6orf48-205ENST00000375640 WIZO95785 1651 aa37.11■■■■□ 3.53
C6orf48-205ENST00000375640 ERCC6Q03468 1493 aa37.07■■■■□ 3.52
C6orf48-205ENST00000375640 NESP48681 1621 aa37.04■■■■□ 3.52
C6orf48-205ENST00000375640 LAMC3Q9Y6N6 1575 aa36.88■■■■□ 3.49
C6orf48-205ENST00000375640 CADPSQ9ULU8 1353 aa36.87■■■■□ 3.49
C6orf48-205ENST00000375640 PDS5BQ9NTI5 1447 aa36.79■■■■□ 3.48
C6orf48-205ENST00000375640 CUX2O14529 1486 aa36.79■■■■□ 3.48
C6orf48-205ENST00000375640 TOP2AP11388 1531 aaKnown RBP36.77■■■■□ 3.48
C6orf48-205ENST00000375640 CFTRP13569 1480 aa36.53■■■■□ 3.44
C6orf48-205ENST00000375640 THOC2Q8NI27 1593 aaKnown RBP36.44■■■■□ 3.42
C6orf48-205ENST00000375640 CCDC88BA6NC98 1476 aa36.43■■■■□ 3.42
C6orf48-205ENST00000375640 KIF21AQ7Z4S6 1674 aa36.41■■■■□ 3.42
C6orf48-205ENST00000375640 FANCD2Q9BXW9 1451 aa36.37■■■■□ 3.41
C6orf48-205ENST00000375640 MRC2Q9UBG0 1479 aa36.35■■■■□ 3.41
C6orf48-205ENST00000375640 CEP164Q9UPV0 1460 aa36.32■■■■□ 3.41
C6orf48-205ENST00000375640 WDR62O43379 1518 aa36.19■■■■□ 3.38
C6orf48-205ENST00000375640 DNAJC5Q9H3Z4 198 aa36.18■■■■□ 3.38
C6orf48-205ENST00000375640 SUPT5HO00267 1087 aaKnown RBP36.06■■■■□ 3.36
C6orf48-205ENST00000375640 URB2Q14146 1524 aaKnown RBP35.98■■■■□ 3.35
C6orf48-205ENST00000375640 PRDM2Q13029 1718 aa35.86■■■■□ 3.33
C6orf48-205ENST00000375640 ABCC8Q09428 1581 aa35.76■■■■□ 3.32
C6orf48-205ENST00000375640 TOPBP1Q92547 1522 aa35.72■■■■□ 3.31
C6orf48-205ENST00000375640 IFT140Q96RY7 1462 aa35.62■■■■□ 3.29
C6orf48-205ENST00000375640 DNMBPQ6XZF7 1577 aa35.6■■■■□ 3.29
C6orf48-205ENST00000375640 ZNF608Q9ULD9 1512 aaPredicted RBP35.45■■■■□ 3.27
C6orf48-205ENST00000375640 POLA1P09884 1462 aaPredicted RBP35.41■■■■□ 3.26
C6orf48-205ENST00000375640 OSCARQ8IYS5 282 aa35.36■■■■□ 3.25
C6orf48-205ENST00000375640 SOGA1O94964 1423 aa35.34■■■■□ 3.25
C6orf48-205ENST00000375640 CUX1P39880 1505 aa35.31■■■■□ 3.24
C6orf48-205ENST00000375640 RAD54L2Q9Y4B4 1467 aa35.28■■■■□ 3.24
C6orf48-205ENST00000375640 TARBP1Q13395 1621 aaKnown RBP35.28■■■■□ 3.24
C6orf48-205ENST00000375640 AQRO60306 1485 aaKnown RBP eCLIP35.26■■■■□ 3.232e-13■■■■■ 92.3
C6orf48-205ENST00000375640 FGD5Q6ZNL6 1462 aa35.26■■■■□ 3.23
C6orf48-205ENST00000375640 TDRD9Q8NDG6 1382 aaKnown RBP35.18■■■■□ 3.22
C6orf48-205ENST00000375640 EIF4G3O43432 1585 aaKnown RBP35.17■■■■□ 3.22
C6orf48-205ENST00000375640 WRNQ14191 1432 aaPredicted RBP eCLIP35.05■■■■□ 3.25e-10■□□□□ 9.6
C6orf48-205ENST00000375640 WDR97A6NE52 1622 aa35■■■■□ 3.19
C6orf48-205ENST00000375640 FBLN2P98095 1184 aa34.98■■■■□ 3.19
C6orf48-205ENST00000375640 ABCA10Q8WWZ4 1543 aa34.93■■■■□ 3.18
C6orf48-205ENST00000375640 GRIN2BQ13224 1484 aa34.92■■■■□ 3.18
C6orf48-205ENST00000375640 TOP2BQ02880 1626 aa34.88■■■■□ 3.17
C6orf48-205ENST00000375640 GAPVD1Q14C86 1478 aa34.88■■■■□ 3.17
C6orf48-205ENST00000375640 SNAPC4Q5SXM2 1469 aa34.87■■■■□ 3.17
C6orf48-205ENST00000375640 CHMP7Q8WUX9 453 aaPredicted RBP34.86■■■■□ 3.17
C6orf48-205ENST00000375640 MAGI1Q96QZ7 1491 aaPredicted RBP34.84■■■■□ 3.17
C6orf48-205ENST00000375640 SYNJ1O43426 1573 aa34.83■■■■□ 3.17
C6orf48-205ENST00000375640 BIVM-ERCC5R4GMW8 1640 aa34.81■■■■□ 3.16
C6orf48-205ENST00000375640 TRIM41Q8WV44 630 aa34.79■■■■□ 3.16
C6orf48-205ENST00000375640 SYNJ2O15056 1496 aa34.71■■■■□ 3.15
C6orf48-205ENST00000375640 ABCA5Q8WWZ7 1642 aa34.7■■■■□ 3.14
C6orf48-205ENST00000375640 CHD1O14646 1710 aa34.68■■■■□ 3.14
C6orf48-205ENST00000375640 ARHGEF11O15085 1522 aa34.6■■■■□ 3.13
C6orf48-205ENST00000375640 PBRM1Q86U86 1689 aa34.56■■■■□ 3.12
C6orf48-205ENST00000375640 RIMBP3CA6NJZ7 1639 aa34.55■■■■□ 3.12
C6orf48-205ENST00000375640 RIMBP3BA6NNM3 1639 aa34.55■■■■□ 3.12
C6orf48-205ENST00000375640 RIMBP3Q9UFD9 1639 aa34.55■■■■□ 3.12
C6orf48-205ENST00000375640 FHAD1B1AJZ9 1412 aa34.49■■■■□ 3.11
C6orf48-205ENST00000375640 ERICH3Q5RHP9 1530 aa34.49■■■■□ 3.11
C6orf48-205ENST00000375640 CYB5RLQ6IPT4 315 aa34.47■■■■□ 3.11
C6orf48-205ENST00000375640 CLASP1Q7Z460 1538 aa34.46■■■■□ 3.11
C6orf48-205ENST00000375640 GRIN2AQ12879 1464 aa34.43■■■■□ 3.1
C6orf48-205ENST00000375640 ADAMTS12P58397 1594 aa34.39■■■■□ 3.1
C6orf48-205ENST00000375640 KIF27Q86VH2 1401 aa34.37■■■■□ 3.09
C6orf48-205ENST00000375640 NUP160Q12769 1436 aa34.33■■■■□ 3.09
C6orf48-205ENST00000375640 IGF1RP08069 1367 aa34.33■■■■□ 3.09
C6orf48-205ENST00000375640 ARAP1Q96P48 1450 aa34.31■■■■□ 3.08
C6orf48-205ENST00000375640 CEP170Q5SW79 1584 aa34.19■■■■□ 3.06
C6orf48-205ENST00000375640 JPH4Q96JJ6 628 aa34.11■■■■□ 3.05
C6orf48-205ENST00000375640 CARMIL1Q5VZK9 1371 aa34.1■■■■□ 3.05
C6orf48-205ENST00000375640 CUL7Q14999 1698 aa34■■■■□ 3.03
C6orf48-205ENST00000375640 SHROOM2Q13796 1616 aa33.97■■■■□ 3.03
C6orf48-205ENST00000375640 PRG4Q92954 1404 aaPredicted RBP33.96■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms