RNA–Protein interactions for RNA: ENST00000589052.5

ILF3-211, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 5

Gene ILF3, Length 637 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-211ENST00000589052 AEBP2Q6ZN18 517 aaPredicted RBP24.97■■□□□ 1.59
ILF3-211ENST00000589052 CHIC1Q5VXU3 224 aa23.61■■□□□ 1.37
ILF3-211ENST00000589052 NISCHQ9Y2I1 1504 aa22.27■■□□□ 1.16
ILF3-211ENST00000589052 SENP3Q9H4L4 574 aaPredicted RBP21.17■□□□□ 0.98
ILF3-211ENST00000589052 PHF23Q9BUL5 403 aaPredicted RBP21■□□□□ 0.95
ILF3-211ENST00000589052 FOXD1Q16676 465 aa19.85■□□□□ 0.77
ILF3-211ENST00000589052 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
ILF3-211ENST00000589052 ABCC9O60706 1549 aa19.44■□□□□ 0.7
ILF3-211ENST00000589052 PLPPR3Q6T4P5 718 aa18.84■□□□□ 0.61
ILF3-211ENST00000589052 DCAF8L2P0C7V8 631 aa18.77■□□□□ 0.6
ILF3-211ENST00000589052 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
ILF3-211ENST00000589052 NACADO15069 1562 aa18.64■□□□□ 0.57
ILF3-211ENST00000589052 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
ILF3-211ENST00000589052 ADRA2BP18089 450 aa18.58■□□□□ 0.56
ILF3-211ENST00000589052 PIAS4Q8N2W9 510 aaPredicted RBP18.55■□□□□ 0.56
ILF3-211ENST00000589052 ZCCHC6Q5VYS8 1495 aaKnown RBP18.53■□□□□ 0.56
ILF3-211ENST00000589052 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
ILF3-211ENST00000589052 MSH5O43196 834 aa18.45■□□□□ 0.54
ILF3-211ENST00000589052 DCAF1Q9Y4B6 1507 aa18.41■□□□□ 0.54
ILF3-211ENST00000589052 PABPN1Q86U42 306 aaKnown RBP eCLIP18.18■□□□□ 0.5
ILF3-211ENST00000589052 UNC13AQ9UPW8 1703 aa18.18■□□□□ 0.5
ILF3-211ENST00000589052 POTEDQ86YR6 584 aa18.15■□□□□ 0.5
ILF3-211ENST00000589052 SCRIBQ14160 1630 aa18.09■□□□□ 0.49
ILF3-211ENST00000589052 BICRAQ9NZM4 1560 aa18.04■□□□□ 0.48
ILF3-211ENST00000589052 SHROOM4Q9ULL8 1493 aa17.89■□□□□ 0.45
ILF3-211ENST00000589052 DNAJC5BQ9UF47 199 aa17.78■□□□□ 0.44
ILF3-211ENST00000589052 EIF4G1Q04637 1599 aaKnown RBP17.61■□□□□ 0.41
ILF3-211ENST00000589052 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
ILF3-211ENST00000589052 CECR2Q9BXF3 1484 aa17.46■□□□□ 0.39
ILF3-211ENST00000589052 BAZ1AQ9NRL2 1556 aaPredicted RBP17.29■□□□□ 0.36
ILF3-211ENST00000589052 SMARCA4P51532 1647 aa17.28■□□□□ 0.36
ILF3-211ENST00000589052 SMARCA2P51531 1590 aa17.2■□□□□ 0.34
ILF3-211ENST00000589052 ATAD2BQ9ULI0 1458 aa17.19■□□□□ 0.34
ILF3-211ENST00000589052 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
ILF3-211ENST00000589052 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
ILF3-211ENST00000589052 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
ILF3-211ENST00000589052 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
ILF3-211ENST00000589052 HMGXB3Q12766 1538 aa17.1■□□□□ 0.33
ILF3-211ENST00000589052 PEG3Q9GZU2 1588 aa17.08■□□□□ 0.32
ILF3-211ENST00000589052 WIZO95785 1651 aa16.97■□□□□ 0.31
ILF3-211ENST00000589052 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
ILF3-211ENST00000589052 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
ILF3-211ENST00000589052 TOP2AP11388 1531 aaKnown RBP16.8■□□□□ 0.28
ILF3-211ENST00000589052 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
ILF3-211ENST00000589052 DMRT2Q9Y5R5 561 aa16.8■□□□□ 0.28
ILF3-211ENST00000589052 NESP48681 1621 aa16.78■□□□□ 0.28
ILF3-211ENST00000589052 LAMC3Q9Y6N6 1575 aa16.76■□□□□ 0.27
ILF3-211ENST00000589052 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
ILF3-211ENST00000589052 PDS5BQ9NTI5 1447 aa16.69■□□□□ 0.26
ILF3-211ENST00000589052 SUPT5HO00267 1087 aaKnown RBP16.64■□□□□ 0.25
ILF3-211ENST00000589052 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
ILF3-211ENST00000589052 PPP4R3CPQ6ZMV5 832 aa16.59■□□□□ 0.25
ILF3-211ENST00000589052 CFTRP13569 1480 aa16.59■□□□□ 0.25
ILF3-211ENST00000589052 KIF21AQ7Z4S6 1674 aa16.57■□□□□ 0.24
ILF3-211ENST00000589052 CUX2O14529 1486 aa16.57■□□□□ 0.24
ILF3-211ENST00000589052 FANCD2Q9BXW9 1451 aa16.53■□□□□ 0.24
ILF3-211ENST00000589052 CEP164Q9UPV0 1460 aa16.52■□□□□ 0.23
ILF3-211ENST00000589052 THOC2Q8NI27 1593 aaKnown RBP16.5■□□□□ 0.23
ILF3-211ENST00000589052 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
ILF3-211ENST00000589052 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
ILF3-211ENST00000589052 WDR62O43379 1518 aa16.39■□□□□ 0.21
ILF3-211ENST00000589052 DCAF8L1A6NGE4 600 aa16.34■□□□□ 0.21
ILF3-211ENST00000589052 URB2Q14146 1524 aaKnown RBP16.32■□□□□ 0.2
ILF3-211ENST00000589052 ABCC8Q09428 1581 aa16.28■□□□□ 0.2
ILF3-211ENST00000589052 TOPBP1Q92547 1522 aa16.24■□□□□ 0.19
ILF3-211ENST00000589052 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
ILF3-211ENST00000589052 CNKSR2Q8WXI2 1034 aa16.21■□□□□ 0.19
ILF3-211ENST00000589052 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
ILF3-211ENST00000589052 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
ILF3-211ENST00000589052 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
ILF3-211ENST00000589052 CUX1P39880 1505 aa16.09■□□□□ 0.17
ILF3-211ENST00000589052 DNAJC5Q9H3Z4 198 aa16.08■□□□□ 0.16
ILF3-211ENST00000589052 SOGA1O94964 1423 aa16.08■□□□□ 0.16
ILF3-211ENST00000589052 FGD5Q6ZNL6 1462 aa16.07■□□□□ 0.16
ILF3-211ENST00000589052 ZNF608Q9ULD9 1512 aaPredicted RBP16.06■□□□□ 0.16
ILF3-211ENST00000589052 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
ILF3-211ENST00000589052 RAD54L2Q9Y4B4 1467 aa16.03■□□□□ 0.16
ILF3-211ENST00000589052 RNF216Q9NWF9 866 aaPredicted RBP16.03■□□□□ 0.16
ILF3-211ENST00000589052 TARBP1Q13395 1621 aaKnown RBP16.03■□□□□ 0.16
ILF3-211ENST00000589052 EIF4G3O43432 1585 aaKnown RBP16■□□□□ 0.15
ILF3-211ENST00000589052 AQRO60306 1485 aaKnown RBP eCLIP15.99■□□□□ 0.153e-10■■■■□ 19.5
ILF3-211ENST00000589052 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
ILF3-211ENST00000589052 TDRD9Q8NDG6 1382 aaKnown RBP15.98■□□□□ 0.15
ILF3-211ENST00000589052 TOP2BQ02880 1626 aa15.97■□□□□ 0.15
ILF3-211ENST00000589052 BIVM-ERCC5R4GMW8 1640 aa15.95■□□□□ 0.14
ILF3-211ENST00000589052 SYNJ1O43426 1573 aa15.95■□□□□ 0.14
ILF3-211ENST00000589052 OSCARQ8IYS5 282 aa15.94■□□□□ 0.14
ILF3-211ENST00000589052 WDR97A6NE52 1622 aa15.94■□□□□ 0.14
ILF3-211ENST00000589052 ABCA10Q8WWZ4 1543 aa15.9■□□□□ 0.14
ILF3-211ENST00000589052 FBLN2P98095 1184 aa15.9■□□□□ 0.14
ILF3-211ENST00000589052 GRIN2BQ13224 1484 aa15.88■□□□□ 0.13
ILF3-211ENST00000589052 GAPVD1Q14C86 1478 aa15.88■□□□□ 0.13
ILF3-211ENST00000589052 NCBP3Q53F19 620 aaKnown RBP15.86■□□□□ 0.13
ILF3-211ENST00000589052 SNAPC4Q5SXM2 1469 aa15.84■□□□□ 0.13
ILF3-211ENST00000589052 CHMP7Q8WUX9 453 aaPredicted RBP15.84■□□□□ 0.13
ILF3-211ENST00000589052 MAGI1Q96QZ7 1491 aaPredicted RBP15.83■□□□□ 0.12
ILF3-211ENST00000589052 PBRM1Q86U86 1689 aa15.81■□□□□ 0.12
ILF3-211ENST00000589052 ABCA5Q8WWZ7 1642 aa15.81■□□□□ 0.12
ILF3-211ENST00000589052 CHD1O14646 1710 aa15.8■□□□□ 0.12
ILF3-211ENST00000589052 RNF39Q9H2S5 420 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms