RNA–Protein interactions for RNA: ENST00000449870.5

ILF3-203, Transcript of interleukin enhancer binding factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ILF3, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-203ENST00000449870 DCAF8L2P0C7V8 631 aa29.86■■■□□ 2.37
ILF3-203ENST00000449870 NISCHQ9Y2I1 1504 aa28.78■■■□□ 2.2
ILF3-203ENST00000449870 SUPT5HO00267 1087 aaKnown RBP27.98■■■□□ 2.07
ILF3-203ENST00000449870 FAM9AQ8IZU1 332 aaPredicted RBP27.59■■■□□ 2.01
ILF3-203ENST00000449870 SHROOM4Q9ULL8 1493 aa27.36■■□□□ 1.97
ILF3-203ENST00000449870 APLP2Q06481 763 aa27.35■■□□□ 1.97
ILF3-203ENST00000449870 PELP1Q8IZL8 1130 aaKnown RBP27.12■■□□□ 1.93
ILF3-203ENST00000449870 EHMT2Q96KQ7 1210 aa26.64■■□□□ 1.85
ILF3-203ENST00000449870 TRIM41Q8WV44 630 aa26.27■■□□□ 1.8
ILF3-203ENST00000449870 ZEB1P37275 1124 aaPredicted RBP26.17■■□□□ 1.78
ILF3-203ENST00000449870 ATP1B4Q9UN42 357 aaPredicted RBP26.02■■□□□ 1.76
ILF3-203ENST00000449870 UBTFP17480 764 aaKnown RBP26■■□□□ 1.75
ILF3-203ENST00000449870 CCER1Q8TC90 406 aaPredicted RBP25.92■■□□□ 1.74
ILF3-203ENST00000449870 RANGAP1P46060 587 aaPredicted RBP25.85■■□□□ 1.73
ILF3-203ENST00000449870 CENPBP07199 599 aaPredicted RBP25.84■■□□□ 1.73
ILF3-203ENST00000449870 PCGF6Q9BYE7 350 aa25.81■■□□□ 1.72
ILF3-203ENST00000449870 TTBK1Q5TCY1 1321 aaPredicted RBP25.79■■□□□ 1.72
ILF3-203ENST00000449870 ERICH6Q7L0X2 663 aa25.54■■□□□ 1.68
ILF3-203ENST00000449870 NEFLP07196 543 aa25.48■■□□□ 1.67
ILF3-203ENST00000449870 MYT1LQ9UL68 1186 aa25.38■■□□□ 1.65
ILF3-203ENST00000449870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.35■■□□□ 1.65
ILF3-203ENST00000449870 HNRNPUL2Q1KMD3 747 aaKnown RBP25.35■■□□□ 1.65
ILF3-203ENST00000449870 TRIM26Q12899 539 aaPredicted RBP25.11■■□□□ 1.61
ILF3-203ENST00000449870 ABCC9O60706 1549 aa24.88■■□□□ 1.57
ILF3-203ENST00000449870 ITGAEP38570 1179 aa24.84■■□□□ 1.57
ILF3-203ENST00000449870 DAXXQ9UER7 740 aaPredicted RBP24.78■■□□□ 1.56
ILF3-203ENST00000449870 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
ILF3-203ENST00000449870 POLR3GLQ9BT43 218 aa24.73■■□□□ 1.55
ILF3-203ENST00000449870 MYT1Q01538 1121 aa24.67■■□□□ 1.54
ILF3-203ENST00000449870 YTHDC1Q96MU7 727 aaKnown RBP24.65■■□□□ 1.54
ILF3-203ENST00000449870 PPARGC1BQ86YN6 1023 aaKnown RBP24.65■■□□□ 1.54
ILF3-203ENST00000449870 PABPN1Q86U42 306 aaKnown RBP eCLIP24.64■■□□□ 1.534e-7■■■□□ 14.6
ILF3-203ENST00000449870 SLC4A1APQ9BWU0 796 aaKnown RBP24.53■■□□□ 1.52
ILF3-203ENST00000449870 FAM50AQ14320 339 aaKnown RBP24.48■■□□□ 1.51
ILF3-203ENST00000449870 TRIM52Q96A61 297 aa24.45■■□□□ 1.5
ILF3-203ENST00000449870 HRCP23327 699 aa24.41■■□□□ 1.5
ILF3-203ENST00000449870 LOC105371045A0A1W2PR82 267 aa24.37■■□□□ 1.49
ILF3-203ENST00000449870 CDK11AQ9UQ88 783 aaPredicted RBP24.35■■□□□ 1.49
ILF3-203ENST00000449870 FBLN2P98095 1184 aa24.34■■□□□ 1.49
ILF3-203ENST00000449870 CLSPNQ9HAW4 1339 aa24.19■■□□□ 1.46
ILF3-203ENST00000449870 NEFMP07197 916 aa24.17■■□□□ 1.46
ILF3-203ENST00000449870 ZBTB47Q9UFB7 747 aaPredicted RBP24.15■■□□□ 1.46
ILF3-203ENST00000449870 ESF1Q9H501 851 aaKnown RBP24.1■■□□□ 1.45
ILF3-203ENST00000449870 ZNF316A6NFI3 1004 aaPredicted RBP24.09■■□□□ 1.45
ILF3-203ENST00000449870 CSRNP3Q8WYN3 585 aa24.09■■□□□ 1.45
ILF3-203ENST00000449870 NPM1P06748 294 aaKnown RBP eCLIP24.07■■□□□ 1.44
ILF3-203ENST00000449870 CNGB1Q14028 1251 aaPredicted RBP24.07■■□□□ 1.44
ILF3-203ENST00000449870 ANP32CO43423 234 aa24.03■■□□□ 1.44
ILF3-203ENST00000449870 NEUROD1Q13562 356 aa23.99■■□□□ 1.43
ILF3-203ENST00000449870 DIEXFQ68CQ4 756 aaKnown RBP23.99■■□□□ 1.43
ILF3-203ENST00000449870 BCANQ96GW7 911 aa23.98■■□□□ 1.43
ILF3-203ENST00000449870 RTL5Q5HYW3 569 aaPredicted RBP23.95■■□□□ 1.42
ILF3-203ENST00000449870 ZNF326Q5BKZ1 582 aaKnown RBP23.95■■□□□ 1.42
ILF3-203ENST00000449870 SCRIBQ14160 1630 aa23.91■■□□□ 1.42
ILF3-203ENST00000449870 CCDC180Q9P1Z9 1646 aa23.8■■□□□ 1.4
ILF3-203ENST00000449870 ZNF777Q9ULD5 760 aaPredicted RBP23.79■■□□□ 1.4
ILF3-203ENST00000449870 ACIN1Q9UKV3 1341 aaKnown RBP23.78■■□□□ 1.4
ILF3-203ENST00000449870 CANXP27824 592 aaKnown RBP23.77■■□□□ 1.4
ILF3-203ENST00000449870 ZCCHC6Q5VYS8 1495 aaKnown RBP23.76■■□□□ 1.39
ILF3-203ENST00000449870 STAG3Q9UJ98 1225 aa23.76■■□□□ 1.39
ILF3-203ENST00000449870 P3H3Q8IVL6 736 aa23.74■■□□□ 1.39
ILF3-203ENST00000449870 SLC24A1O60721 1099 aa23.66■■□□□ 1.38
ILF3-203ENST00000449870 RB1CC1Q8TDY2 1594 aa23.66■■□□□ 1.38
ILF3-203ENST00000449870 TONSLQ96HA7 1378 aa23.59■■□□□ 1.37
ILF3-203ENST00000449870 ARID3CA6NKF2 412 aa23.58■■□□□ 1.37
ILF3-203ENST00000449870 TSPY4P0CV99 314 aa23.58■■□□□ 1.37
ILF3-203ENST00000449870 TSPY10P0CW01 314 aa23.58■■□□□ 1.37
ILF3-203ENST00000449870 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
ILF3-203ENST00000449870 CHGAP10645 457 aaKnown RBP23.52■■□□□ 1.36
ILF3-203ENST00000449870 EEA1Q15075 1411 aa23.46■■□□□ 1.35
ILF3-203ENST00000449870 MTUS2Q5JR59 1369 aa23.42■■□□□ 1.34
ILF3-203ENST00000449870 NACADO15069 1562 aa23.39■■□□□ 1.34
ILF3-203ENST00000449870 RSF1Q96T23 1441 aaPredicted RBP23.39■■□□□ 1.34
ILF3-203ENST00000449870 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.3■■□□□ 1.32
ILF3-203ENST00000449870 PLEKHD1A6NEE1 506 aa23.28■■□□□ 1.32
ILF3-203ENST00000449870 ANP32AP39687 249 aaKnown RBP23.28■■□□□ 1.32
ILF3-203ENST00000449870 UPF2Q9HAU5 1272 aaKnown RBP23.27■■□□□ 1.32
ILF3-203ENST00000449870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.22■■□□□ 1.311e-8■■□□□ 13.5
ILF3-203ENST00000449870 DCAF1Q9Y4B6 1507 aa23.22■■□□□ 1.31
ILF3-203ENST00000449870 CLIP1P30622 1438 aa23.18■■□□□ 1.3
ILF3-203ENST00000449870 BAZ1BQ9UIG0 1483 aaKnown RBP23.18■■□□□ 1.3
ILF3-203ENST00000449870 WDR43Q15061 677 aaKnown RBP eCLIP23.17■■□□□ 1.37e-6■■□□□ 11.4
ILF3-203ENST00000449870 NPM2Q86SE8 214 aaKnown RBP23.17■■□□□ 1.3
ILF3-203ENST00000449870 PPP1R15AO75807 674 aaPredicted RBP23.15■■□□□ 1.3
ILF3-203ENST00000449870 ANP32BQ92688 251 aaKnown RBP23.14■■□□□ 1.29
ILF3-203ENST00000449870 CDCA8Q53HL2 280 aa23.13■■□□□ 1.29
ILF3-203ENST00000449870 TMC1Q8TDI8 760 aa23.13■■□□□ 1.29
ILF3-203ENST00000449870 KIF27Q86VH2 1401 aa23.12■■□□□ 1.29
ILF3-203ENST00000449870 GOLGA3Q08378 1498 aa23.12■■□□□ 1.29
ILF3-203ENST00000449870 CHIC2Q9UKJ5 165 aa23.11■■□□□ 1.29
ILF3-203ENST00000449870 PLPPR3Q6T4P5 718 aa23.09■■□□□ 1.29
ILF3-203ENST00000449870 HSP90AA1P07900 732 aaKnown RBP23.09■■□□□ 1.29
ILF3-203ENST00000449870 GTF3C3Q9Y5Q9 886 aa23.07■■□□□ 1.28
ILF3-203ENST00000449870 BCL11AQ9H165 835 aa23.07■■□□□ 1.28
ILF3-203ENST00000449870 WRNQ14191 1432 aaPredicted RBP eCLIP23.04■■□□□ 1.28
ILF3-203ENST00000449870 ERCC6Q03468 1493 aa23.02■■□□□ 1.28
ILF3-203ENST00000449870 MYH16Q9H6N6 1097 aa23.02■■□□□ 1.28
ILF3-203ENST00000449870 HNRNPUQ00839 825 aaKnown RBP eCLIP23■■□□□ 1.27
ILF3-203ENST00000449870 EIF4G2P78344 907 aaKnown RBP eCLIP23■■□□□ 1.27
ILF3-203ENST00000449870 EIF5BO60841 1220 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms