RNA–Protein interactions for RNA: ENST00000375641.6

C6orf48-206, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-206ENST00000375641 NISCHQ9Y2I1 1504 aa46.8■■■■■ 5.08
C6orf48-206ENST00000375641 ABCC9O60706 1549 aa41.98■■■■■ 4.31
C6orf48-206ENST00000375641 CCDC180Q9P1Z9 1646 aa41.88■■■■■ 4.3
C6orf48-206ENST00000375641 RB1CC1Q8TDY2 1594 aa39.92■■■■□ 3.98
C6orf48-206ENST00000375641 NACADO15069 1562 aa39.67■■■■□ 3.94
C6orf48-206ENST00000375641 DCAF8L2P0C7V8 631 aa39.6■■■■□ 3.93
C6orf48-206ENST00000375641 DNAJC5BQ9UF47 199 aa39.46■■■■□ 3.91
C6orf48-206ENST00000375641 PABPN1Q86U42 306 aaKnown RBP eCLIP39.16■■■■□ 3.86
C6orf48-206ENST00000375641 MYO15BQ96JP2 1530 aa39.13■■■■□ 3.85
C6orf48-206ENST00000375641 UNC13AQ9UPW8 1703 aa38.93■■■■□ 3.82
C6orf48-206ENST00000375641 BICRAQ9NZM4 1560 aa38.77■■■■□ 3.8
C6orf48-206ENST00000375641 ZCCHC6Q5VYS8 1495 aaKnown RBP38.76■■■■□ 3.8
C6orf48-206ENST00000375641 DCAF1Q9Y4B6 1507 aa38.64■■■■□ 3.78
C6orf48-206ENST00000375641 SHROOM4Q9ULL8 1493 aa38.22■■■■□ 3.71
C6orf48-206ENST00000375641 SCRIBQ14160 1630 aa38.21■■■■□ 3.71
C6orf48-206ENST00000375641 CC2D2AQ9P2K1 1620 aa37.88■■■■□ 3.65
C6orf48-206ENST00000375641 CECR2Q9BXF3 1484 aa37.82■■■■□ 3.64
C6orf48-206ENST00000375641 EIF4G1Q04637 1599 aaKnown RBP37.8■■■■□ 3.64
C6orf48-206ENST00000375641 NCAPD3P42695 1498 aa36.67■■■■□ 3.46
C6orf48-206ENST00000375641 ATAD2BQ9ULI0 1458 aa36.56■■■■□ 3.44
C6orf48-206ENST00000375641 SMARCA4P51532 1647 aa36.45■■■■□ 3.43
C6orf48-206ENST00000375641 SMARCA2P51531 1590 aa36.4■■■■□ 3.42
C6orf48-206ENST00000375641 HMGXB3Q12766 1538 aa36.33■■■■□ 3.41
C6orf48-206ENST00000375641 BAZ1AQ9NRL2 1556 aaPredicted RBP36.3■■■■□ 3.4
C6orf48-206ENST00000375641 ERCC6Q03468 1493 aa36.23■■■■□ 3.39
C6orf48-206ENST00000375641 DNAJC5Q9H3Z4 198 aa36.21■■■■□ 3.39
C6orf48-206ENST00000375641 BAZ1BQ9UIG0 1483 aaKnown RBP36.17■■■■□ 3.38
C6orf48-206ENST00000375641 CUX2O14529 1486 aa36.15■■■■□ 3.38
C6orf48-206ENST00000375641 PEG3Q9GZU2 1588 aa36.1■■■■□ 3.37
C6orf48-206ENST00000375641 NESP48681 1621 aa36.07■■■■□ 3.36
C6orf48-206ENST00000375641 MROH2BQ7Z745 1585 aa36.06■■■■□ 3.36
C6orf48-206ENST00000375641 LAMC3Q9Y6N6 1575 aa35.77■■■■□ 3.32
C6orf48-206ENST00000375641 PDS5BQ9NTI5 1447 aa35.63■■■■□ 3.29
C6orf48-206ENST00000375641 THOC2Q8NI27 1593 aaKnown RBP35.62■■■■□ 3.29
C6orf48-206ENST00000375641 WIZO95785 1651 aa35.59■■■■□ 3.29
C6orf48-206ENST00000375641 CADPSQ9ULU8 1353 aa35.58■■■■□ 3.29
C6orf48-206ENST00000375641 KIF21AQ7Z4S6 1674 aa35.5■■■■□ 3.27
C6orf48-206ENST00000375641 RSF1Q96T23 1441 aaPredicted RBP35.35■■■■□ 3.25
C6orf48-206ENST00000375641 MRC2Q9UBG0 1479 aa35.29■■■■□ 3.24
C6orf48-206ENST00000375641 WDR62O43379 1518 aa35.17■■■■□ 3.22
C6orf48-206ENST00000375641 TOP2AP11388 1531 aaKnown RBP35.15■■■■□ 3.22
C6orf48-206ENST00000375641 CFTRP13569 1480 aa35.15■■■■□ 3.22
C6orf48-206ENST00000375641 CEP164Q9UPV0 1460 aa35.15■■■■□ 3.22
C6orf48-206ENST00000375641 FANCD2Q9BXW9 1451 aa35.13■■■■□ 3.21
C6orf48-206ENST00000375641 URB2Q14146 1524 aaKnown RBP34.83■■■■□ 3.17
C6orf48-206ENST00000375641 CCDC88BA6NC98 1476 aa34.82■■■■□ 3.16
C6orf48-206ENST00000375641 PRDM2Q13029 1718 aa34.63■■■■□ 3.13
C6orf48-206ENST00000375641 TRIM41Q8WV44 630 aa34.61■■■■□ 3.13
C6orf48-206ENST00000375641 OSCARQ8IYS5 282 aa34.59■■■■□ 3.13
C6orf48-206ENST00000375641 IFT140Q96RY7 1462 aa34.46■■■■□ 3.11
C6orf48-206ENST00000375641 TOPBP1Q92547 1522 aa34.46■■■■□ 3.11
C6orf48-206ENST00000375641 ZNF608Q9ULD9 1512 aaPredicted RBP34.41■■■■□ 3.1
C6orf48-206ENST00000375641 ABCC8Q09428 1581 aa34.39■■■■□ 3.1
C6orf48-206ENST00000375641 DNMBPQ6XZF7 1577 aa34.3■■■■□ 3.08
C6orf48-206ENST00000375641 EIF4G3O43432 1585 aaKnown RBP34.15■■■■□ 3.06
C6orf48-206ENST00000375641 AQRO60306 1485 aaKnown RBP eCLIP34.14■■■■□ 3.062e-13■■■■■ 92.3
C6orf48-206ENST00000375641 TARBP1Q13395 1621 aaKnown RBP34.12■■■■□ 3.05
C6orf48-206ENST00000375641 POLA1P09884 1462 aaPredicted RBP34.11■■■■□ 3.05
C6orf48-206ENST00000375641 RIMBP3CA6NJZ7 1639 aa34.02■■■■□ 3.04
C6orf48-206ENST00000375641 RIMBP3BA6NNM3 1639 aa34.02■■■■□ 3.04
C6orf48-206ENST00000375641 RIMBP3Q9UFD9 1639 aa34.02■■■■□ 3.04
C6orf48-206ENST00000375641 RAD54L2Q9Y4B4 1467 aa34.01■■■■□ 3.04
C6orf48-206ENST00000375641 SOGA1O94964 1423 aa34.01■■■■□ 3.03
C6orf48-206ENST00000375641 ARHGEF11O15085 1522 aa33.94■■■■□ 3.02
C6orf48-206ENST00000375641 TDRD9Q8NDG6 1382 aaKnown RBP33.94■■■■□ 3.02
C6orf48-206ENST00000375641 FBLN2P98095 1184 aa33.93■■■■□ 3.02
C6orf48-206ENST00000375641 FGD5Q6ZNL6 1462 aa33.89■■■■□ 3.02
C6orf48-206ENST00000375641 CUX1P39880 1505 aa33.87■■■■□ 3.01
C6orf48-206ENST00000375641 SUPT5HO00267 1087 aaKnown RBP33.86■■■■□ 3.01
C6orf48-206ENST00000375641 CHD1O14646 1710 aa33.86■■■■□ 3.01
C6orf48-206ENST00000375641 CYB5RLQ6IPT4 315 aa33.79■■■■□ 3
C6orf48-206ENST00000375641 SNAPC4Q5SXM2 1469 aa33.75■■■□□ 2.99
C6orf48-206ENST00000375641 WDR97A6NE52 1622 aa33.75■■■□□ 2.99
C6orf48-206ENST00000375641 CHMP7Q8WUX9 453 aaPredicted RBP33.69■■■□□ 2.98
C6orf48-206ENST00000375641 GRIN2BQ13224 1484 aa33.67■■■□□ 2.98
C6orf48-206ENST00000375641 MAGI1Q96QZ7 1491 aaPredicted RBP33.64■■■□□ 2.98
C6orf48-206ENST00000375641 ARAP1Q96P48 1450 aa33.63■■■□□ 2.97
C6orf48-206ENST00000375641 GAPVD1Q14C86 1478 aa33.56■■■□□ 2.96
C6orf48-206ENST00000375641 SYNJ2O15056 1496 aa33.55■■■□□ 2.96
C6orf48-206ENST00000375641 CLASP1Q7Z460 1538 aa33.53■■■□□ 2.96
C6orf48-206ENST00000375641 ABCA10Q8WWZ4 1543 aa33.52■■■□□ 2.96
C6orf48-206ENST00000375641 SYNJ1O43426 1573 aa33.51■■■□□ 2.96
C6orf48-206ENST00000375641 PBRM1Q86U86 1689 aa33.43■■■□□ 2.94
C6orf48-206ENST00000375641 WRNQ14191 1432 aaPredicted RBP eCLIP33.42■■■□□ 2.945e-10■□□□□ 9.6
C6orf48-206ENST00000375641 ABCA5Q8WWZ7 1642 aa33.41■■■□□ 2.94
C6orf48-206ENST00000375641 TRHP20396 242 aaPredicted RBP33.39■■■□□ 2.94
C6orf48-206ENST00000375641 TOP2BQ02880 1626 aa33.31■■■□□ 2.92
C6orf48-206ENST00000375641 BIVM-ERCC5R4GMW8 1640 aa33.28■■■□□ 2.92
C6orf48-206ENST00000375641 GRIN2AQ12879 1464 aa33.22■■■□□ 2.91
C6orf48-206ENST00000375641 ADAMTS12P58397 1594 aa33.16■■■□□ 2.9
C6orf48-206ENST00000375641 FHAD1B1AJZ9 1412 aa33.14■■■□□ 2.9
C6orf48-206ENST00000375641 NUP160Q12769 1436 aa33.12■■■□□ 2.89
C6orf48-206ENST00000375641 ERICH3Q5RHP9 1530 aa33.08■■■□□ 2.89
C6orf48-206ENST00000375641 CEP170Q5SW79 1584 aa33.08■■■□□ 2.89
C6orf48-206ENST00000375641 ERCC6L2Q5T890 1561 aa33.04■■■□□ 2.88
C6orf48-206ENST00000375641 SHROOM2Q13796 1616 aa32.91■■■□□ 2.86
C6orf48-206ENST00000375641 JPH4Q96JJ6 628 aa32.87■■■□□ 2.85
C6orf48-206ENST00000375641 PRG4Q92954 1404 aaPredicted RBP32.83■■■□□ 2.85
C6orf48-206ENST00000375641 IGF1RP08069 1367 aa32.76■■■□□ 2.83
C6orf48-206ENST00000375641 KIF27Q86VH2 1401 aa32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms