RNA–Protein interactions for RNA: ENST00000262300.12

PKMYT1-201, Transcript of protein kinase, membrane associated tyrosine/threonine 1, humanhuman

TSL 1 (best) BASIC

Gene PKMYT1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMYT1-201ENST00000262300 NISCHQ9Y2I1 1504 aa43.72■■■■■ 4.59
PKMYT1-201ENST00000262300 CCDC180Q9P1Z9 1646 aa38.02■■■■□ 3.68
PKMYT1-201ENST00000262300 ZCCHC6Q5VYS8 1495 aaKnown RBP36.77■■■■□ 3.48
PKMYT1-201ENST00000262300 DCAF8L2P0C7V8 631 aa36.17■■■■□ 3.38
PKMYT1-201ENST00000262300 DCAF1Q9Y4B6 1507 aa36.04■■■■□ 3.36
PKMYT1-201ENST00000262300 SHROOM4Q9ULL8 1493 aa35.98■■■■□ 3.35
PKMYT1-201ENST00000262300 ABCC9O60706 1549 aa35.93■■■■□ 3.34
PKMYT1-201ENST00000262300 MYO15BQ96JP2 1530 aa35.51■■■■□ 3.27
PKMYT1-201ENST00000262300 NACADO15069 1562 aa35.33■■■■□ 3.25
PKMYT1-201ENST00000262300 SUPT5HO00267 1087 aaKnown RBP35.21■■■■□ 3.23
PKMYT1-201ENST00000262300 SCRIBQ14160 1630 aa35.15■■■■□ 3.22
PKMYT1-201ENST00000262300 RB1CC1Q8TDY2 1594 aa35.03■■■■□ 3.2
PKMYT1-201ENST00000262300 UNC13AQ9UPW8 1703 aa34.52■■■■□ 3.12
PKMYT1-201ENST00000262300 CHIC1Q5VXU3 224 aa34.3■■■■□ 3.08
PKMYT1-201ENST00000262300 BICRAQ9NZM4 1560 aa34.05■■■■□ 3.04
PKMYT1-201ENST00000262300 CECR2Q9BXF3 1484 aa34.05■■■■□ 3.04
PKMYT1-201ENST00000262300 RSF1Q96T23 1441 aaPredicted RBP34■■■■□ 3.03
PKMYT1-201ENST00000262300 PABPN1Q86U42 306 aaKnown RBP eCLIP33.93■■■■□ 3.02
PKMYT1-201ENST00000262300 MROH2BQ7Z745 1585 aa33.86■■■■□ 3.01
PKMYT1-201ENST00000262300 BAZ1AQ9NRL2 1556 aaPredicted RBP33.73■■■□□ 2.99
PKMYT1-201ENST00000262300 WIZO95785 1651 aa33.65■■■□□ 2.98
PKMYT1-201ENST00000262300 SMARCA4P51532 1647 aa33.62■■■□□ 2.97
PKMYT1-201ENST00000262300 TOP2AP11388 1531 aaKnown RBP33.19■■■□□ 2.9
PKMYT1-201ENST00000262300 LOC105371045A0A1W2PR82 267 aa33.14■■■□□ 2.9
PKMYT1-201ENST00000262300 PEG3Q9GZU2 1588 aa33.11■■■□□ 2.89
PKMYT1-201ENST00000262300 HRCP23327 699 aa33.1■■■□□ 2.89
PKMYT1-201ENST00000262300 PCGF6Q9BYE7 350 aa33.04■■■□□ 2.88
PKMYT1-201ENST00000262300 EIF4G1Q04637 1599 aaKnown RBP33■■■□□ 2.87
PKMYT1-201ENST00000262300 ATAD2BQ9ULI0 1458 aa32.98■■■□□ 2.87
PKMYT1-201ENST00000262300 SMARCA2P51531 1590 aa32.93■■■□□ 2.86
PKMYT1-201ENST00000262300 TRIM41Q8WV44 630 aa32.92■■■□□ 2.86
PKMYT1-201ENST00000262300 CCDC88BA6NC98 1476 aa32.88■■■□□ 2.85
PKMYT1-201ENST00000262300 BAZ1BQ9UIG0 1483 aaKnown RBP32.83■■■□□ 2.85
PKMYT1-201ENST00000262300 HMGXB3Q12766 1538 aa32.6■■■□□ 2.81
PKMYT1-201ENST00000262300 NCAPD3P42695 1498 aa32.6■■■□□ 2.81
PKMYT1-201ENST00000262300 TRIM26Q12899 539 aaPredicted RBP32.59■■■□□ 2.81
PKMYT1-201ENST00000262300 CC2D2AQ9P2K1 1620 aa32.5■■■□□ 2.79
PKMYT1-201ENST00000262300 FAM9AQ8IZU1 332 aaPredicted RBP32.48■■■□□ 2.79
PKMYT1-201ENST00000262300 ABCC8Q09428 1581 aa32.35■■■□□ 2.77
PKMYT1-201ENST00000262300 PPARGC1BQ86YN6 1023 aaKnown RBP32.23■■■□□ 2.75
PKMYT1-201ENST00000262300 EHMT2Q96KQ7 1210 aa32.09■■■□□ 2.73
PKMYT1-201ENST00000262300 WRNQ14191 1432 aaPredicted RBP eCLIP31.99■■■□□ 2.711e-7■■□□□ 12.5
PKMYT1-201ENST00000262300 CFTRP13569 1480 aa31.96■■■□□ 2.71
PKMYT1-201ENST00000262300 SYNJ1O43426 1573 aa31.95■■■□□ 2.7
PKMYT1-201ENST00000262300 ZEB1P37275 1124 aaPredicted RBP31.92■■■□□ 2.7
PKMYT1-201ENST00000262300 PRDM2Q13029 1718 aa31.91■■■□□ 2.7
PKMYT1-201ENST00000262300 CADPSQ9ULU8 1353 aa31.8■■■□□ 2.68
PKMYT1-201ENST00000262300 EEA1Q15075 1411 aa31.74■■■□□ 2.67
PKMYT1-201ENST00000262300 TOP2BQ02880 1626 aa31.73■■■□□ 2.67
PKMYT1-201ENST00000262300 SOGA1O94964 1423 aa31.73■■■□□ 2.67
PKMYT1-201ENST00000262300 DNAJC5BQ9UF47 199 aa31.71■■■□□ 2.67
PKMYT1-201ENST00000262300 BIVM-ERCC5R4GMW8 1640 aa31.7■■■□□ 2.67
PKMYT1-201ENST00000262300 CUX1P39880 1505 aa31.64■■■□□ 2.66
PKMYT1-201ENST00000262300 RUSC2Q8N2Y8 1516 aa31.64■■■□□ 2.66
PKMYT1-201ENST00000262300 NESP48681 1621 aa31.63■■■□□ 2.65
PKMYT1-201ENST00000262300 TNIKQ9UKE5 1360 aa31.59■■■□□ 2.65
PKMYT1-201ENST00000262300 CEP162Q5TB80 1403 aa31.58■■■□□ 2.65
PKMYT1-201ENST00000262300 CSRNP3Q8WYN3 585 aa31.54■■■□□ 2.64
PKMYT1-201ENST00000262300 FANCD2Q9BXW9 1451 aa31.52■■■□□ 2.64
PKMYT1-201ENST00000262300 LAMC3Q9Y6N6 1575 aa31.51■■■□□ 2.63
PKMYT1-201ENST00000262300 GOLGA3Q08378 1498 aa31.45■■■□□ 2.62
PKMYT1-201ENST00000262300 UBTFP17480 764 aaKnown RBP31.34■■■□□ 2.61
PKMYT1-201ENST00000262300 KIF21BO75037 1637 aa31.31■■■□□ 2.6
PKMYT1-201ENST00000262300 CEP164Q9UPV0 1460 aa31.29■■■□□ 2.6
PKMYT1-201ENST00000262300 KIF21AQ7Z4S6 1674 aa31.27■■■□□ 2.6
PKMYT1-201ENST00000262300 FGD5Q6ZNL6 1462 aa31.25■■■□□ 2.59
PKMYT1-201ENST00000262300 DNMBPQ6XZF7 1577 aa31.25■■■□□ 2.59
PKMYT1-201ENST00000262300 PDS5BQ9NTI5 1447 aa31.22■■■□□ 2.59
PKMYT1-201ENST00000262300 TOPBP1Q92547 1522 aa31.2■■■□□ 2.59
PKMYT1-201ENST00000262300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.16■■■□□ 2.58
PKMYT1-201ENST00000262300 URB2Q14146 1524 aaKnown RBP31.15■■■□□ 2.58
PKMYT1-201ENST00000262300 CCER1Q8TC90 406 aaPredicted RBP31.15■■■□□ 2.58
PKMYT1-201ENST00000262300 KIF27Q86VH2 1401 aa31.13■■■□□ 2.57
PKMYT1-201ENST00000262300 CUX2O14529 1486 aa31.08■■■□□ 2.57
PKMYT1-201ENST00000262300 TTBK1Q5TCY1 1321 aaPredicted RBP31.07■■■□□ 2.56
PKMYT1-201ENST00000262300 POLA1P09884 1462 aaPredicted RBP31.07■■■□□ 2.56
PKMYT1-201ENST00000262300 RAPGEF2Q9Y4G8 1499 aa31.06■■■□□ 2.56
PKMYT1-201ENST00000262300 CLIP1P30622 1438 aa31.02■■■□□ 2.56
PKMYT1-201ENST00000262300 RAD54L2Q9Y4B4 1467 aa31.02■■■□□ 2.56
PKMYT1-201ENST00000262300 PRXQ9BXM0 1461 aa30.98■■■□□ 2.55
PKMYT1-201ENST00000262300 ERICH3Q5RHP9 1530 aa30.94■■■□□ 2.54
PKMYT1-201ENST00000262300 ABCA10Q8WWZ4 1543 aa30.92■■■□□ 2.54
PKMYT1-201ENST00000262300 VPS8Q8N3P4 1428 aa30.92■■■□□ 2.54
PKMYT1-201ENST00000262300 WDR97A6NE52 1622 aa30.89■■■□□ 2.54
PKMYT1-201ENST00000262300 MRC2Q9UBG0 1479 aa30.86■■■□□ 2.53
PKMYT1-201ENST00000262300 IGF1RP08069 1367 aa30.85■■■□□ 2.53
PKMYT1-201ENST00000262300 TARBP1Q13395 1621 aaKnown RBP30.74■■■□□ 2.51
PKMYT1-201ENST00000262300 ERCC6Q03468 1493 aa30.74■■■□□ 2.51
PKMYT1-201ENST00000262300 ABCA5Q8WWZ7 1642 aa30.72■■■□□ 2.51
PKMYT1-201ENST00000262300 WDR62O43379 1518 aa30.71■■■□□ 2.51
PKMYT1-201ENST00000262300 CARMIL1Q5VZK9 1371 aa30.7■■■□□ 2.51
PKMYT1-201ENST00000262300 APLP2Q06481 763 aa30.69■■■□□ 2.5
PKMYT1-201ENST00000262300 TDRD9Q8NDG6 1382 aaKnown RBP30.68■■■□□ 2.5
PKMYT1-201ENST00000262300 RANGAP1P46060 587 aaPredicted RBP30.68■■■□□ 2.5
PKMYT1-201ENST00000262300 THOC2Q8NI27 1593 aaKnown RBP30.63■■■□□ 2.49
PKMYT1-201ENST00000262300 CUL7Q14999 1698 aa30.62■■■□□ 2.49
PKMYT1-201ENST00000262300 GAPVD1Q14C86 1478 aa30.61■■■□□ 2.49
PKMYT1-201ENST00000262300 ARAP1Q96P48 1450 aa30.56■■■□□ 2.48
PKMYT1-201ENST00000262300 HNRNPUL2Q1KMD3 747 aaKnown RBP30.52■■■□□ 2.48
PKMYT1-201ENST00000262300 PBRM1Q86U86 1689 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms