Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NUCKS1Q9H1E3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
NUCKS1Q9H1E3 AC022211.4-201ENST00000625094 2161 ntBASIC26■■□□□ 1.75
NUCKS1Q9H1E3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
NUCKS1Q9H1E3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26■■□□□ 1.75
NUCKS1Q9H1E3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
NUCKS1Q9H1E3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NUCKS1Q9H1E3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26■■□□□ 1.75
NUCKS1Q9H1E3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26■■□□□ 1.75
NUCKS1Q9H1E3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
NUCKS1Q9H1E3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.99■■□□□ 1.75
NUCKS1Q9H1E3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NUCKS1Q9H1E3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NUCKS1Q9H1E3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
NUCKS1Q9H1E3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NUCKS1Q9H1E3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NUCKS1Q9H1E3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
NUCKS1Q9H1E3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NUCKS1Q9H1E3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.99■■□□□ 1.75
NUCKS1Q9H1E3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NUCKS1Q9H1E3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NUCKS1Q9H1E3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NUCKS1Q9H1E3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NUCKS1Q9H1E3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NUCKS1Q9H1E3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NUCKS1Q9H1E3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.98■■□□□ 1.75
NUCKS1Q9H1E3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
NUCKS1Q9H1E3 HSD17B1P1-201ENST00000590052 955 ntBASIC25.97■■□□□ 1.75
NUCKS1Q9H1E3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.97■■□□□ 1.75
NUCKS1Q9H1E3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.97■■□□□ 1.75
NUCKS1Q9H1E3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
NUCKS1Q9H1E3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
NUCKS1Q9H1E3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
NUCKS1Q9H1E3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.96■■□□□ 1.75
NUCKS1Q9H1E3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
NUCKS1Q9H1E3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
NUCKS1Q9H1E3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.95■■□□□ 1.74
NUCKS1Q9H1E3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
NUCKS1Q9H1E3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
NUCKS1Q9H1E3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
NUCKS1Q9H1E3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NUCKS1Q9H1E3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NUCKS1Q9H1E3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
NUCKS1Q9H1E3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
NUCKS1Q9H1E3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
NUCKS1Q9H1E3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.93■■□□□ 1.74
NUCKS1Q9H1E3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.93■■□□□ 1.74
NUCKS1Q9H1E3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NUCKS1Q9H1E3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.93■■□□□ 1.74
NUCKS1Q9H1E3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NUCKS1Q9H1E3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
NUCKS1Q9H1E3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
NUCKS1Q9H1E3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
NUCKS1Q9H1E3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
NUCKS1Q9H1E3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
NUCKS1Q9H1E3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.92■■□□□ 1.74
NUCKS1Q9H1E3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NUCKS1Q9H1E3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
NUCKS1Q9H1E3 AC138932.3-201ENST00000567634 1902 ntBASIC25.91■■□□□ 1.74
NUCKS1Q9H1E3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.91■■□□□ 1.74
NUCKS1Q9H1E3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.91■■□□□ 1.74
NUCKS1Q9H1E3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NUCKS1Q9H1E3 GPX1-201ENST00000419349 1106 ntBASIC25.9■■□□□ 1.74
NUCKS1Q9H1E3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
NUCKS1Q9H1E3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
NUCKS1Q9H1E3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NUCKS1Q9H1E3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NUCKS1Q9H1E3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.89■■□□□ 1.74
NUCKS1Q9H1E3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.88■■□□□ 1.73
NUCKS1Q9H1E3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.88■■□□□ 1.73
NUCKS1Q9H1E3 AC022413.1-201ENST00000624602 984 ntBASIC25.88■■□□□ 1.73
NUCKS1Q9H1E3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NUCKS1Q9H1E3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NUCKS1Q9H1E3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NUCKS1Q9H1E3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NUCKS1Q9H1E3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.87■■□□□ 1.73
NUCKS1Q9H1E3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NUCKS1Q9H1E3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.87■■□□□ 1.73
NUCKS1Q9H1E3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.87■■□□□ 1.73
NUCKS1Q9H1E3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NUCKS1Q9H1E3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
NUCKS1Q9H1E3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NUCKS1Q9H1E3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
NUCKS1Q9H1E3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.86■■□□□ 1.73
NUCKS1Q9H1E3 AC097639.1-201ENST00000565519 1891 ntBASIC25.86■■□□□ 1.73
NUCKS1Q9H1E3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NUCKS1Q9H1E3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NUCKS1Q9H1E3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NUCKS1Q9H1E3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
NUCKS1Q9H1E3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
NUCKS1Q9H1E3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
NUCKS1Q9H1E3 AC060814.1-201ENST00000554326 538 ntBASIC25.84■■□□□ 1.73
NUCKS1Q9H1E3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
NUCKS1Q9H1E3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.84■■□□□ 1.73
NUCKS1Q9H1E3 AL139125.2-201ENST00000623134 1869 ntBASIC25.84■■□□□ 1.73
NUCKS1Q9H1E3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
NUCKS1Q9H1E3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
NUCKS1Q9H1E3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
NUCKS1Q9H1E3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.83■■□□□ 1.73
NUCKS1Q9H1E3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms